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PRD_900036

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OAZCBVsing1.43Å1.44Å
CBVCBUsing1.53Å1.52Å
CBVCBSsing1.53Å1.53Å
CBSCBIsing1.53Å1.53Å
CBSNAXsing1.47Å1.47Å
NAXCBFsing1.35Å1.33Å
CBFCABsing1.51Å1.53Å
CBFOADdoub1.21Å1.23Å
CBIOAHsing1.43Å1.43Å
CBIOBAsing1.43Å1.44Å
OBACBKsing1.43Å1.44Å
CBKCBUsing1.53Å1.52Å
CBKCAVsing1.53Å1.53Å
CAVOAGsing1.43Å1.43Å
CBUO1'sing1.43Å1.44Å
O1'C1'sing1.43Å1.44Å
C1'C2'sing1.53Å1.52Å
C1'O5'sing1.43Å1.44Å
O5'C5'sing1.43Å1.44Å
C5'C4'sing1.53Å1.53Å
C5'C6'sing1.53Å1.53Å
C6'O6'sing1.43Å1.43Å
C4'O4'sing1.43Å1.43Å
C4'C3'sing1.53Å1.53Å
C3'O3'sing1.43Å1.43Å
C3'C2'sing1.53Å1.53Å
C2'O2'sing1.43Å1.44Å
O2'CBQsing1.43Å1.44Å
CBQOBBsing1.43Å1.44Å
CBQCBOsing1.53Å1.53Å
OBBCBHsing1.43Å1.44Å
CBHCACsing1.53Å1.53Å
CBHCBLsing1.53Å1.53Å
CBLOAIsing1.43Å1.43Å
CBLCBNsing1.53Å1.53Å
CBNOAKsing1.43Å1.43Å
CBNCBOsing1.53Å1.53Å
CBOOALsing1.43Å1.43Å
OAZHAZsing0.97Å0.95Å
CBVHBVsing1.09Å1.10Å
CBSHBSsing1.09Å1.10Å
NAXHAXsing0.97Å1.00Å
CABHAB1sing1.09Å1.10Å
CABHAB2sing1.09Å1.10Å
CABHAB3sing1.09Å1.10Å
CBIHBIsing1.09Å1.10Å
OAHHAHsing0.97Å0.95Å
CBKHBKsing1.09Å1.10Å
CAVHAV1sing1.09Å1.10Å
CAVHAV2sing1.09Å1.10Å
OAGHAGsing0.97Å0.95Å
CBUHBUsing1.09Å1.10Å
C1'H1'sing1.09Å1.10Å
C5'H5'sing1.09Å1.10Å
C6'H6'1sing1.09Å1.10Å
C6'H6'2sing1.09Å1.10Å
O6'H6'sing0.97Å0.95Å
C4'H4'sing1.09Å1.10Å
O4'H1sing0.97Å0.95Å
C3'H3'sing1.09Å1.10Å
O3'H2sing0.97Å0.95Å
C2'H2'sing1.09Å1.10Å
CBQHBQsing1.09Å1.10Å
CBHHBHsing1.09Å1.10Å
CACHAC1sing1.09Å1.10Å
CACHAC2sing1.09Å1.10Å
CACHAC3sing1.09Å1.10Å
CBLHBLsing1.09Å1.10Å
OAIHAIsing0.97Å0.95Å
CBNHBNsing1.09Å1.10Å
OAKHAKsing0.97Å0.95Å
CBOHBOsing1.09Å1.10Å
OALHALsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OAZCBVCBU114.3°109.6°
OAZCBVCBS112.2°109.5°
CBVOAZHAZ109.5°114.0°
OAZCBVHBV105.1°109.6°
CBUCBVCBS115.3°109.0°
CBVCBUCBK111.0°109.2°
CBVCBUO1'111.2°109.5°
CBUCBVHBV104.3°109.5°
CBVCBUHBU108.0°109.5°
CBVCBSCBI111.2°109.2°
CBVCBSNAX108.8°109.5°
CBSCBVHBV104.2°109.6°
CBVCBSHBS109.2°109.5°
CBICBSNAX108.4°109.5°
CBSCBIOAH106.3°109.4°
CBSCBIOBA110.4°109.4°
CBICBSHBS109.2°109.5°
CBSCBIHBI109.6°109.5°
CBSNAXCBF123.3°120.0°
NAXCBSHBS110.0°109.6°
CBSNAXHAX118.4°120.0°
NAXCBFCAB114.7°120.0°
NAXCBFOAD124.3°120.0°
CBFNAXHAX118.3°120.0°
CABCBFOAD120.7°120.0°
CBFCABHAB1109.5°109.5°
CBFCABHAB2109.5°109.5°
CBFCABHAB3109.5°109.5°
OAHCBIOBA108.6°109.5°
OAHCBIHBI111.0°109.5°
CBIOAHHAH109.5°113.9°
CBIOBACBK111.3°114.1°
OBACBIHBI110.9°109.5°
OBACBKCBU110.3°109.4°
OBACBKCAV109.6°109.5°
OBACBKHBK109.8°109.4°
CBUCBKCAV110.0°109.5°
CBKCBUO1'109.5°109.6°
CBUCBKHBK108.6°109.5°
CBKCBUHBU108.0°109.6°
CBKCAVOAG109.7°109.5°
CAVCBKHBK108.5°109.5°
CBKCAVHAV1109.4°109.4°
CBKCAVHAV2109.4°109.5°
OAGCAVHAV1109.4°109.5°
OAGCAVHAV2109.4°109.5°
CAVOAGHAG109.5°114.0°
CBUO1'C1'110.7°114.0°
O1'CBUHBU109.1°109.5°
O1'C1'C2'108.2°109.5°
O1'C1'O5'110.0°109.5°
O1'C1'H1'110.2°109.6°
C2'C1'O5'109.3°109.4°
C1'C2'C3'107.2°109.2°
C1'C2'O2'108.7°109.6°
C2'C1'H1'109.0°109.4°
C1'C2'H2'109.7°109.5°
C1'O5'C5'111.7°114.1°
O5'C1'H1'110.2°109.4°
O5'C5'C4'109.6°109.4°
O5'C5'C6'109.7°109.4°
O5'C5'H5'110.1°109.5°
C4'C5'C6'110.0°109.5°
C5'C4'O4'109.7°109.5°
C5'C4'C3'109.5°109.2°
C4'C5'H5'108.8°109.5°
C5'C4'H4'108.9°109.5°
C5'C6'O6'109.6°109.4°
C6'C5'H5'108.7°109.5°
C5'C6'H6'1109.4°109.5°
C5'C6'H6'2109.4°109.5°
O6'C6'H6'1109.4°109.5°
O6'C6'H6'2109.5°109.5°
C6'O6'H6'109.5°114.0°
O4'C4'C3'109.4°109.5°
O4'C4'H4'110.3°109.5°
C4'O4'H1109.5°114.0°
C4'C3'O3'109.5°109.5°
C4'C3'C2'110.3°109.0°
C3'C4'H4'108.9°109.6°
C4'C3'H3'108.6°109.5°
O3'C3'C2'109.7°109.6°
O3'C3'H3'110.0°109.6°
C3'O3'H2109.5°114.0°
C3'C2'O2'110.7°109.5°
C2'C3'H3'108.6°109.6°
C3'C2'H2'109.5°109.5°
C2'O2'CBQ111.5°114.1°
O2'C2'H2'110.9°109.6°
O2'CBQOBB110.4°109.5°
O2'CBQCBO109.0°109.5°
O2'CBQHBQ109.7°109.5°
OBBCBQCBO109.7°109.4°
CBQOBBCBH112.8°114.0°
OBBCBQHBQ109.6°109.4°
CBQCBOCBN110.5°109.1°
CBQCBOOAL110.1°109.5°
CBOCBQHBQ108.4°109.5°
CBQCBOHBO108.2°109.5°
OBBCBHCAC109.7°109.5°
OBBCBHCBL110.0°109.4°
OBBCBHHBH109.7°109.5°
CACCBHCBL110.3°109.4°
CACCBHHBH108.5°109.5°
CBHCACHAC1109.5°109.5°
CBHCACHAC2109.5°109.5°
CBHCACHAC3109.5°109.4°
CBHCBLOAI110.1°109.6°
CBHCBLCBN109.7°109.2°
CBLCBHHBH108.5°109.5°
CBHCBLHBL108.7°109.5°
OAICBLCBN109.6°109.5°
OAICBLHBL110.0°109.5°
CBLOAIHAI109.5°114.0°
CBLCBNOAK109.5°109.6°
CBLCBNCBO110.3°109.0°
CBNCBLHBL108.7°109.5°
CBLCBNHBN108.7°109.5°
OAKCBNCBO109.5°109.6°
OAKCBNHBN110.1°109.6°
CBNOAKHAK109.5°114.0°
CBNCBOOAL110.2°109.5°
CBOCBNHBN108.7°109.6°
CBNCBOHBO108.2°109.6°
OALCBOHBO109.6°109.6°
CBOOALHAL109.5°114.0°
HAB1CABHAB2109.4°109.5°
HAB1CABHAB3109.5°109.6°
HAB2CABHAB3109.5°109.4°
HAV1CAVHAV2109.5°109.5°
H6'1C6'H6'2109.5°109.5°
HAC1CACHAC2109.5°109.5°
HAC1CACHAC3109.4°109.4°
HAC2CACHAC3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OAZCBVCBUCBS132.2°119.9°
OAZCBVCBUHBV114.2°120.2°
OAZCBVCBSHBV113.2°120.2°
OAZCBVCBSCBI174.4°176.9°
OAZCBVCBSNAX66.3°63.3°
OAZCBVCBUCBK174.3°176.8°
OAZCBVCBUO1'63.5°63.2°
OAZCBVCBSHBS53.8°56.9°
OAZCBVCBUHBU56.1°56.9°
CBUCBVCBSHBV113.6°119.9°
CBUCBVCBSCBI41.2°57.0°
CBUCBVCBSNAX160.5°176.9°
CBVCBUCBKOBA52.9°57.6°
CBVCBUCBKO1'123.2°119.9°
CBVCBUCBKHBU118.2°119.9°
CBVCBUCBKCAV173.9°177.6°
CBVCBUO1'HBU119.0°120.1°
CBVCBUO1'C1'105.8°141.1°
CBUCBVOAZHAZ180.0°180.0°
CBUCBVCBSHBS79.4°62.9°
CBVCBUCBKHBK67.5°62.4°
CBVCBSCBINAX119.6°119.9°
CBVCBSCBIHBS120.5°119.9°
CBVCBSNAXHBS119.6°120.2°
CBVCBSNAXCBF93.9°155.0°
CBVCBSCBIOAH168.4°177.6°
CBVCBSCBIOBA50.9°57.6°
CBSCBVCBUCBK42.1°57.0°
CBSCBVCBUO1'164.3°176.9°
CBSCBVOAZHAZ46.3°60.4°
CBVCBSNAXHAX86.1°25.0°
CBVCBSCBIHBI71.5°62.3°
CBSCBVCBUHBU76.0°63.0°
CBICBSNAXHBS119.4°120.2°
CBICBSNAXCBF145.0°85.3°
CBSCBIOAHOBA118.8°119.9°
CBSCBIOAHHBI119.1°120.1°
CBSCBIOBAHBI121.6°120.0°
CBSCBIOBACBK65.0°61.2°
CBICBSCBVHBV72.5°62.9°
CBICBSNAXHAX35.0°94.6°
CBSCBIOAHHAH180.0°180.0°
CBSNAXCBFHAX180.0°180.0°
CBSNAXCBFCAB173.9°180.0°
CBSNAXCBFOAD0.0°0.0°
NAXCBSCBIOAH72.0°62.5°
NAXCBSCBIOBA170.4°177.5°
NAXCBSCBVHBV46.9°57.0°
NAXCBSCBIHBI48.1°57.5°
NAXCBFCABOAD174.2°180.0°
CBFNAXCBSHBS25.6°34.9°
NAXCBFCABHAB1174.1°90.0°
NAXCBFCABHAB254.2°150.0°
NAXCBFCABHAB365.8°30.1°
CABCBFNAXHAX6.1°0.0°
CBFCABHAB1HAB2120.0°120.0°
CBFCABHAB1HAB3120.0°120.0°
CBFCABHAB2HAB3120.0°119.9°
OADCBFNAXHAX180.0°180.0°
OADCBFCABHAB10.0°90.0°
OADCBFCABHAB2120.0°30.0°
OADCBFCABHAB3120.0°149.9°
OAHCBIOBAHBI122.2°120.1°
OAHCBIOBACBK178.8°178.9°
OAHCBICBSHBS47.9°57.7°
CBIOBACBKCBU66.1°61.1°
CBIOBACBKCAV172.7°178.9°
OBACBICBSHBS69.7°62.3°
OBACBIOAHHAH61.2°60.1°
CBIOBACBKHBK53.5°58.9°
OBACBKCBUCAV121.0°120.0°
OBACBKCBUHBK120.4°120.0°
OBACBKCAVHBK119.9°120.0°
OBACBKCAVOAG60.4°64.7°
OBACBKCBUO1'176.0°177.5°
CBKOBACBIHBI56.6°58.8°
OBACBKCAVHAV159.6°175.3°
OBACBKCAVHAV2179.6°55.3°
OBACBKCBUHBU65.3°62.3°
CBUCBKCAVHBK118.7°120.1°
CBUCBKCAVOAG61.0°175.3°
CBKCBUO1'HBU118.0°120.2°
CBKCBUO1'C1'131.2°99.2°
CBKCBUCBVHBV71.5°63.0°
CBUCBKCAVHAV1179.0°55.3°
CBUCBKCAVHAV259.0°64.7°
CBKCAVOAGHAV1120.0°120.0°
CBKCAVOAGHAV2120.0°120.0°
CAVCBKCBUO1'63.0°62.5°
CBKCAVHAV1HAV2119.9°120.0°
CBKCAVOAGHAG180.0°180.0°
CAVCBKCBUHBU55.7°57.7°
OAGCAVCBKHBK179.7°55.2°
OAGCAVHAV1HAV2119.9°120.0°
CBUO1'C1'C2'153.8°174.0°
CBUO1'C1'O5'86.9°66.0°
O1'CBUCBVHBV50.7°57.0°
O1'CBUCBKHBK55.6°57.6°
CBUO1'C1'H1'34.7°54.0°
O1'C1'C2'O5'119.7°120.0°
O1'C1'C2'H1'119.8°120.1°
O1'C1'O5'H1'121.6°120.1°
O1'C1'O5'C5'175.6°178.9°
O1'C1'C2'C3'178.8°177.6°
O1'C1'C2'O2'59.2°62.5°
C1'O1'CBUHBU13.2°21.0°
O1'C1'C2'H2'62.3°57.7°
C2'C1'O5'H1'119.8°119.9°
C2'C1'O5'C5'65.8°61.1°
C1'C2'C3'C4'57.2°57.0°
C1'C2'C3'O3'178.0°176.8°
C1'C2'C3'O2'118.4°119.9°
C1'C2'C3'H2'119.0°119.9°
C1'C2'O2'H2'120.7°120.1°
C1'C2'O2'CBQ149.7°146.2°
C1'C2'C3'H3'61.8°62.9°
C1'O5'C5'C4'62.1°61.2°
C1'O5'C5'C6'177.1°178.9°
O5'C1'C2'C3'61.5°57.6°
O5'C1'C2'O2'178.9°177.5°
C1'O5'C5'H5'57.5°58.9°
O5'C1'C2'H2'57.4°62.3°
O5'C5'C4'C6'120.7°119.9°
O5'C5'C4'H5'120.3°120.0°
O5'C5'C6'H5'120.4°120.0°
O5'C5'C6'O6'59.4°65.0°
O5'C5'C4'O4'64.3°62.3°
O5'C5'C4'C3'55.8°57.6°
C5'O5'C1'H1'54.0°58.8°
O5'C5'C6'H6'1179.4°175.0°
O5'C5'C6'H6'260.7°55.0°
O5'C5'C4'H4'174.8°177.6°
C4'C5'C6'H5'119.0°120.1°
C4'C5'C6'O6'180.0°175.1°
C5'C4'O4'C3'120.2°119.7°
C5'C4'O4'H4'120.0°120.1°
C5'C4'C3'H4'119.0°119.9°
C5'C4'C3'O3'175.8°176.9°
C5'C4'C3'C2'54.9°57.0°
C4'C5'C6'H6'160.0°55.1°
C4'C5'C6'H6'259.9°64.9°
C5'C4'O4'H1180.0°60.0°
C5'C4'C3'H3'64.0°62.9°
C5'C6'O6'H6'1120.0°120.0°
C5'C6'O6'H6'2120.0°120.0°
C6'C5'C4'O4'56.4°57.7°
C6'C5'C4'C3'176.5°177.6°
C5'C6'H6'1H6'2119.9°120.1°
C5'C6'O6'H6'180.0°180.0°
C6'C5'C4'H4'64.5°62.4°
O6'C6'C5'H5'61.0°55.0°
O6'C6'H6'1H6'2120.0°120.0°
O4'C4'C3'H4'120.7°120.2°
O4'C4'C3'O3'55.5°56.9°
O4'C4'C3'C2'65.4°62.9°
O4'C4'C5'H5'175.3°177.7°
O4'C4'C3'H3'175.7°177.1°
C4'C3'O3'C2'121.3°119.5°
C4'C3'O3'H3'119.3°120.2°
C4'C3'C2'H3'119.0°119.9°
C4'C3'C2'O2'175.6°176.9°
C3'C4'C5'H5'64.6°62.4°
C3'C4'O4'H159.8°179.7°
C4'C3'O3'H2180.0°60.0°
C4'C3'C2'H2'61.8°62.9°
O3'C3'C2'H3'120.3°120.3°
O3'C3'C2'O2'63.6°63.2°
O3'C3'C4'H4'65.1°63.2°
O3'C3'C2'H2'59.0°56.9°
C3'C2'O2'H2'121.8°120.1°
C3'C2'O2'CBQ92.8°94.0°
C3'C2'C1'H1'59.0°62.3°
C2'C3'C4'H4'174.0°176.9°
C2'C3'O3'H258.8°179.6°
C2'O2'CBQOBB63.1°72.0°
C2'O2'CBQCBO176.4°168.1°
O2'C2'C1'H1'60.7°57.6°
O2'C2'C3'H3'56.7°57.0°
C2'O2'CBQHBQ57.9°48.0°
O2'CBQOBBCBO120.1°120.1°
O2'CBQOBBHBQ121.0°120.0°
O2'CBQCBOHBQ119.3°120.1°
O2'CBQOBBCBH58.7°58.8°
O2'CBQCBOCBN64.9°62.4°
O2'CBQCBOOAL57.0°57.5°
CBQO2'C2'H2'29.0°26.1°
O2'CBQCBOHBO176.7°177.7°
OBBCBQCBOHBQ119.7°119.9°
CBQOBBCBHCAC176.2°178.9°
CBQOBBCBHCBL62.2°61.2°
OBBCBQCBOCBN56.1°57.7°
OBBCBQCBOOAL178.0°177.5°
CBQOBBCBHHBH57.1°58.8°
OBBCBQCBOHBO62.3°62.3°
CBOCBQOBBCBH61.4°61.2°
CBQCBOCBNCBL53.4°57.0°
CBQCBOCBNOAK174.0°176.9°
CBQCBOCBNOAL121.9°119.8°
CBQCBOCBNHBO118.3°119.9°
CBQCBOOALHBO118.9°120.2°
CBQCBOCBNHBN65.7°62.9°
CBQCBOOALHAL180.0°60.1°
OBBCBHCACCBL121.4°119.9°
OBBCBHCACHBH119.9°120.1°
OBBCBHCBLHBH120.1°120.0°
OBBCBHCBLOAI63.7°62.3°
OBBCBHCBLCBN57.0°57.7°
CBHOBBCBQHBQ179.7°178.8°
OBBCBHCACHAC1180.0°56.3°
OBBCBHCACHAC260.0°176.3°
OBBCBHCACHAC360.0°63.6°
OBBCBHCBLHBL175.7°177.6°
CACCBHCBLHBH118.7°120.0°
CACCBHCBLOAI57.5°57.7°
CACCBHCBLCBN178.2°177.6°
CBHCACHAC1HAC2120.0°120.0°
CBHCACHAC1HAC3120.0°119.9°
CBHCACHAC2HAC3120.0°120.0°
CACCBHCBLHBL63.1°62.5°
CBHCBLOAICBN120.8°119.7°
CBHCBLOAIHBL119.8°120.1°
CBHCBLCBNHBL118.7°119.9°
CBHCBLCBNOAK174.1°176.9°
CBHCBLCBNCBO53.5°57.0°
CBLCBHCACHAC158.6°63.6°
CBLCBHCACHAC2178.6°56.4°
CBLCBHCACHAC361.4°176.5°
CBHCBLOAIHAI180.0°60.0°
CBHCBLCBNHBN65.6°62.9°
OAICBLCBNHBL120.3°120.1°
OAICBLCBNOAK53.1°56.9°
OAICBLCBNCBO67.5°63.0°
OAICBLCBHHBH176.2°177.7°
OAICBLCBNHBN173.4°177.1°
CBLCBNOAKCBO121.1°119.5°
CBLCBNOAKHBN119.4°120.2°
CBLCBNCBOHBN119.1°119.9°
CBLCBNCBOOAL175.3°176.8°
CBNCBLCBHHBH63.1°62.4°
CBNCBLOAIHAI59.2°179.7°
CBLCBNOAKHAK180.0°180.0°
CBLCBNCBOHBO65.0°62.9°
OAKCBNCBOHBN120.3°120.3°
OAKCBNCBOOAL64.1°63.3°
OAKCBNCBLHBL67.2°63.2°
OAKCBNCBOHBO55.6°56.9°
CBNCBOOALHBO119.0°120.2°
CBNCBOCBQHBQ175.7°177.6°
CBOCBNCBLHBL172.2°176.9°
CBOCBNOAKHAK58.9°60.4°
CBNCBOOALHAL57.9°179.7°
OALCBOCBQHBQ62.3°62.6°
OALCBOCBNHBN56.2°57.0°
HAZOAZCBVHBV66.3°59.8°
HBVCBVCBSHBS167.0°177.2°
HBVCBVCBUHBU170.4°177.1°
HBSCBSNAXHAX154.4°145.2°
HBSCBSCBIHBI167.9°177.7°
HAB1CABHAB2HAB3120.0°120.1°
HBICBIOAHHAH60.9°60.0°
HBKCBKCAVHAV160.3°64.8°
HBKCBKCAVHAV259.7°175.2°
HBKCBKCBUHBU174.3°177.7°
HAV1CAVOAGHAG60.0°60.0°
HAV2CAVOAGHAG60.0°60.0°
H1'C1'C2'H2'177.9°177.8°
H5'C5'C6'H6'158.9°65.0°
H5'C5'C6'H6'2178.9°175.0°
H5'C5'C4'H4'54.4°57.6°
H6'1C6'O6'H6'60.0°60.1°
H6'2C6'O6'H6'60.0°60.0°
H4'C4'O4'H159.9°60.1°
H4'C4'C3'H3'55.1°57.0°
H3'C3'O3'H260.6°60.1°
H3'C3'C2'H2'179.3°177.2°
HBQCBQCBOHBO57.4°57.6°
HBHCBHCACHAC160.1°176.4°
HBHCBHCACHAC259.9°63.6°
HBHCBHCACHAC3179.9°56.5°
HBHCBHCBLHBL55.6°57.5°
HAC1CACHAC2HAC3120.0°120.0°
HBLCBLOAIHAI60.2°60.2°
HBLCBLCBNHBN53.1°57.0°
HBNCBNOAKHAK60.5°59.9°
HBNCBNCBOHBO175.9°177.2°
HBOCBOOALHAL61.1°60.0°

226707

PDB entries from 2024-10-30

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