Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

PRD_002331

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C1sing1.47Å0.00Å
N1H1sing0.97Å0.00Å
C1C2sing1.51Å0.00Å
C1C3sing1.53Å0.00Å
C1H2sing1.09Å0.00Å
C2O1doub1.21Å0.00Å
C2O2sing1.34Å0.00Å
C3C4sing1.51Å0.00Å
C3H3sing1.09Å0.00Å
C3H4sing1.09Å0.00Å
C4C5doub1.38Å0.00ÅAromatic
C4C6sing1.38Å0.00ÅAromatic
C5C7sing1.38Å0.00ÅAromatic
C5H5sing1.08Å0.00Å
C6C8doub1.38Å0.00ÅAromatic
C6H6sing1.08Å0.00Å
C7C9doub1.38Å0.00ÅAromatic
C7H7sing1.08Å0.00Å
C8C9sing1.38Å0.00ÅAromatic
C8H8sing1.08Å0.00Å
C9H9sing1.08Å0.00Å
O2H10sing0.97Å0.00Å
N2C10sing1.39Å1.43Å
N2C11sing1.47Å1.45Å
N2H11sing0.97Å1.00Å
C10N3doub1.30Å1.43Å
C10N4sing1.39Å1.43Å
C11C13sing1.53Å1.53Å
C11H12sing1.09Å1.10Å
C11H13sing1.09Å1.10Å
N3H14sing0.97Å1.00Å
C12C13sing1.53Å1.52Å
C12N4sing1.47Å1.45Å
C12C14sing1.53Å1.54Å
C12H15sing1.09Å1.10Å
C13H16sing1.09Å1.10Å
C13H17sing1.09Å1.10Å
N4H18sing0.97Å1.00Å
N5C14sing1.46Å1.47Å
N5H19sing0.97Å1.00Å
C14C15sing1.51Å1.54Å
C14H20sing1.09Å1.10Å
C15O3doub1.21Å1.24Å
C16O4doub1.22Å0.00Å
N5C16sing1.35Å26.04Å
N6C17sing1.47Å1.46Å
N6H21sing0.97Å1.00Å
C17C18sing1.51Å1.52Å
C17C19sing1.53Å1.52Å
C17H22sing1.09Å1.10Å
C18O5doub1.21Å1.23Å
C19C20sing1.53Å1.52Å
C19H23sing1.09Å1.10Å
C19H24sing1.09Å1.10Å
C20C21sing1.53Å1.52Å
C20C22sing1.53Å1.53Å
C20H25sing1.09Å1.10Å
C21H26sing1.09Å1.10Å
C21H27sing1.09Å1.10Å
C21H28sing1.09Å1.10Å
C22H29sing1.09Å1.10Å
C22H30sing1.09Å1.10Å
C22H31sing1.09Å1.10Å
N7C23sing1.46Å1.46Å
N7H32sing0.97Å1.00Å
C23C24sing1.53Å1.52Å
C23C25sing1.53Å1.51Å
C23H33sing1.09Å1.10Å
C24O6sing1.43Å1.23Å
C24H34sing1.09Å1.10Å
C24H35sing1.09Å1.10Å
O6H36sing0.97Å0.95Å
C25C26sing1.51Å1.51Å
C25H37sing1.09Å1.10Å
C25H38sing1.09Å1.10Å
C26C27doub1.38Å1.39ÅAromatic
C26C28sing1.38Å1.38ÅAromatic
C27C29sing1.38Å1.38ÅAromatic
C27H39sing1.08Å1.08Å
C28C30doub1.38Å1.38ÅAromatic
C28H40sing1.08Å1.08Å
C29C31doub1.38Å1.39ÅAromatic
C29H41sing1.08Å1.08Å
C30C31sing1.38Å1.39ÅAromatic
C30H42sing1.08Å1.08Å
C31H43sing1.08Å1.08Å
N1C16sing1.35Å0.00Å
C15N6sing1.35Å1.33Å
C18N7sing1.35Å1.33Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1N1H190.0°120.0°
N1C1C290.0°109.5°
N1C1C390.0°109.4°
N1C1H290.0°109.4°
C1N1C1690.0°120.0°
H1N1C1690.0°120.0°
C2C1C390.0°109.5°
C2C1H290.0°109.5°
C1C2O190.0°120.0°
C1C2O290.0°120.0°
C3C1H290.0°109.5°
C1C3C490.0°109.4°
C1C3H390.0°109.4°
C1C3H490.0°109.5°
O1C2O290.0°120.0°
C2O2H1090.0°117.0°
C4C3H390.0°109.5°
C4C3H490.0°109.5°
C3C4C590.0°120.0°
C3C4C690.0°120.0°
H3C3H490.0°109.5°
C5C4C690.0°120.0°
C4C5C790.0°120.0°
C4C5H590.0°120.0°
C4C6C890.0°120.0°
C4C6H690.0°120.0°
C7C5H590.0°120.0°
C5C7C990.0°120.0°
C5C7H790.0°120.0°
C8C6H690.0°120.0°
C6C8C990.0°120.0°
C6C8H890.0°120.0°
C9C7H790.0°120.0°
C7C9C890.0°120.0°
C7C9H990.0°120.0°
C9C8H890.0°120.0°
C8C9H990.0°120.0°
C10N2C11122.0°117.4°
C10N2H11119.0°121.3°
N2C10N3107.5°121.7°
N2C10N4126.5°116.4°
C11N2H11119.0°121.3°
N2C11C1398.6°108.7°
N2C11H12112.1°109.7°
N2C11H13112.2°109.6°
N3C10N4126.0°121.8°
C10N3H14112.0°120.0°
C10N4C12108.7°117.5°
C10N4H18125.6°121.3°
C13C11H12112.1°109.6°
C13C11H13112.1°109.6°
C11C13C12109.0°109.2°
C11C13H16109.6°109.5°
C11C13H17109.6°109.5°
H12C11H13109.5°109.7°
C13C12N4109.6°108.6°
C13C12C14110.9°109.6°
C13C12H15109.3°109.6°
C12C13H16109.6°109.5°
C12C13H17109.6°109.5°
N4C12C14107.4°109.6°
N4C12H15110.4°109.6°
C12N4H18125.6°121.3°
C14C12H15109.2°109.8°
C12C14N598.8°109.5°
C12C14C15119.8°109.4°
C12C14H20107.3°109.5°
H16C13H17109.5°109.5°
C14N5H19107.0°120.0°
N5C14C15114.7°109.5°
N5C14H20108.2°109.4°
C14N5C16146.1°120.0°
H19N5C16106.9°120.0°
C15C14H20107.4°109.5°
C14C15O3122.1°120.0°
C14C15N6116.2°120.0°
O3C15N6121.8°120.0°
O4C16N590.0°119.9°
O4C16N190.0°120.0°
N5C16N190.0°120.0°
C17N6H21119.3°120.0°
N6C17C18109.2°109.5°
N6C17C19111.1°109.5°
N6C17H22109.0°109.5°
C17N6C15121.3°120.0°
H21N6C15119.4°120.0°
C18C17C19111.0°109.5°
C18C17H22108.2°109.5°
C17C18O5122.4°120.0°
C17C18N7117.7°120.0°
C19C17H22108.2°109.5°
C17C19C20120.8°109.5°
C17C19H23106.6°109.5°
C17C19H24106.6°109.5°
O5C18N7119.9°120.0°
C20C19H23106.6°109.5°
C20C19H24106.6°109.4°
C19C20C21113.0°109.4°
C19C20C22110.8°109.5°
C19C20H25108.0°109.5°
H23C19H24109.5°109.5°
C21C20C22108.8°109.5°
C21C20H25108.1°109.5°
C20C21H26109.5°109.4°
C20C21H27109.5°109.5°
C20C21H28109.5°109.5°
C22C20H25108.0°109.5°
C20C22H29109.5°109.5°
C20C22H30109.5°109.4°
C20C22H31109.4°109.5°
H26C21H27109.5°109.5°
H26C21H28109.5°109.4°
H27C21H28109.5°109.6°
H29C22H30109.5°109.5°
H29C22H31109.5°109.5°
H30C22H31109.5°109.4°
C23N7H32121.7°120.0°
N7C23C24109.7°109.5°
N7C23C25109.8°109.4°
N7C23H33109.0°109.5°
C23N7C18116.5°120.0°
H32N7C18121.7°120.0°
C24C23C25111.6°109.5°
C24C23H33108.2°109.5°
C23C24O6121.5°109.5°
C23C24H34106.4°109.5°
C23C24H35106.4°109.5°
C25C23H33108.4°109.5°
C23C25C26119.4°109.5°
C23C25H37107.0°109.4°
C23C25H38107.0°109.4°
O6C24H34106.4°109.5°
O6C24H35106.4°109.4°
C24O6H36109.5°114.0°
H34C24H35109.5°109.4°
C26C25H37106.9°109.5°
C26C25H38106.9°109.5°
C25C26C27118.8°120.0°
C25C26C28122.9°120.0°
H37C25H38109.5°109.5°
C27C26C28118.3°119.9°
C26C27C29121.4°120.0°
C26C27H39119.3°120.0°
C26C28C30120.7°120.0°
C26C28H40119.6°120.0°
C29C27H39119.3°120.0°
C27C29C31119.7°120.0°
C27C29H41120.2°120.0°
C30C28H40119.6°120.0°
C28C30C31120.5°120.0°
C28C30H42119.7°120.0°
C31C29H41120.2°120.0°
C29C31C30119.4°120.0°
C29C31H43120.3°120.0°
C31C30H42119.7°120.0°
C30C31H43120.3°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1N1H1C1690.0°179.7°
N1C1C2C390.0°120.0°
N1C1C2H290.0°120.0°
N1C1C3H290.0°119.9°
N1C1C2O190.0°0.0°
N1C1C2O290.0°180.0°
N1C1C3C490.0°65.0°
N1C1C3H390.0°175.0°
N1C1C3H490.0°55.0°
C1N1C16O490.0°0.0°
C1N1C16N590.0°180.0°
H1N1C1C290.0°95.0°
H1N1C1C390.0°25.0°
H1N1C1H290.0°145.0°
H1N1C16O490.0°179.8°
H1N1C16N590.0°0.3°
C2C1C3H290.0°120.1°
C1C2O1O290.0°179.9°
C2C1C3C490.0°175.0°
C2C1C3H390.0°55.0°
C2C1C3H490.0°65.0°
C1C2O2H1090.0°180.0°
C2C1N1C1690.0°85.3°
C3C1C2O190.0°119.9°
C3C1C2O290.0°60.0°
C1C3C4H390.0°119.9°
C1C3C4H490.0°120.0°
C1C3H3H490.0°120.0°
C1C3C4C590.0°90.0°
C1C3C4C690.0°90.3°
C3C1N1C1690.0°154.7°
H2C1C2O190.0°120.0°
H2C1C2O290.0°60.0°
H2C1C3C490.0°54.9°
H2C1C3H390.0°65.0°
H2C1C3H490.0°174.9°
H2C1N1C1690.0°34.8°
O1C2O2H1090.0°0.0°
C4C3H3H490.0°120.0°
C3C4C5C690.0°179.6°
C3C4C5C790.0°180.0°
C3C4C5H590.0°0.1°
C3C4C6C890.0°180.0°
C3C4C6H690.0°0.0°
H3C3C4C590.0°29.9°
H3C3C4C690.0°149.7°
H4C3C4C590.0°149.9°
H4C3C4C690.0°29.7°
C4C5C7H590.0°179.9°
C5C4C6C890.0°0.3°
C5C4C6H690.0°179.6°
C4C5C7C990.0°0.1°
C4C5C7H790.0°179.9°
C6C4C5C790.0°0.3°
C6C4C5H590.0°179.7°
C4C6C8H690.0°180.0°
C4C6C8C990.0°0.1°
C4C6C8H890.0°180.0°
C5C7C9H790.0°179.9°
C5C7C9C890.0°0.2°
C5C7C9H990.0°180.0°
H5C5C7C990.0°180.0°
H5C5C7H790.0°0.0°
C6C8C9C790.0°0.2°
C6C8C9H890.0°179.9°
C6C8C9H990.0°180.0°
H6C6C8C990.0°179.9°
H6C6C8H890.0°0.0°
C7C9C8H990.0°179.8°
C7C9C8H890.0°179.7°
H7C7C9C890.0°179.8°
H7C7C9H990.0°0.0°
H8C8C9H990.0°0.2°
C10N2C11H11180.0°179.7°
N2C10N3N4180.0°180.0°
C10N2C11C1333.4°49.6°
C10N2C11H12151.6°169.4°
C10N2C11H1384.8°70.2°
N2C10N3H14180.0°180.0°
N2C10N4C123.7°42.7°
N2C10N4H18176.3°137.4°
C11N2C10N3176.9°137.3°
C11N2C10N43.1°42.7°
N2C11C13H12118.2°119.8°
N2C11C13H13118.2°119.7°
N2C11H12H13125.1°120.4°
N2C11C13C1267.6°55.8°
N2C11C13H1652.3°64.2°
N2C11C13H17172.5°175.7°
H11N2C10N33.1°43.0°
H11N2C10N4176.9°137.0°
H11N2C11C13146.6°130.1°
H11N2C11H1228.4°10.3°
H11N2C11H1395.2°110.1°
N3C10N4C12176.3°137.3°
N3C10N4H183.7°42.6°
N4C10N3H140.0°0.0°
C10N4C12C1337.1°49.7°
C10N4C12H18180.0°179.9°
C10N4C12C14157.6°169.4°
C10N4C12H1583.5°70.0°
C13C11H12H13125.1°120.4°
C11C13C12H16120.0°119.9°
C11C13C12H17119.9°119.9°
C11C13C12N476.4°55.8°
C11C13C12C14165.2°175.5°
C11C13C12H1544.8°64.0°
C11C13H16H17120.2°120.1°
H12C11C13C12174.2°175.6°
H12C11C13H1665.9°55.7°
H12C11C13H1754.3°64.5°
H13C11C13C1250.6°63.9°
H13C11C13H16170.5°176.2°
H13C11C13H1769.3°56.0°
C13C12N4C14120.6°119.7°
C13C12N4H15120.5°119.7°
C13C12C14H15120.5°120.4°
C12C13H16H17120.2°120.2°
C13C12N4H18142.9°130.5°
C13C12C14N5159.0°60.0°
C13C12C14C1533.9°180.0°
C13C12C14H2088.7°60.0°
N4C12C14H15119.7°120.5°
N4C12C13H1643.6°64.1°
N4C12C13H17163.7°175.7°
N4C12C14N581.2°59.1°
N4C12C14C15153.6°60.9°
N4C12C14H2031.1°179.1°
C14C12C13H1674.9°55.6°
C14C12C13H1745.3°64.5°
C14C12N4H1822.4°10.7°
C12C14N5C15128.6°120.0°
C12C14N5H20111.6°120.0°
C12C14N5H19138.3°95.0°
C12C14C15H20122.6°120.0°
C12C14C15O370.2°120.0°
C12C14N5C1641.7°85.0°
C12C14C15N6110.0°60.0°
H15C12C13H16164.7°176.1°
H15C12C13H1775.1°56.0°
H15C12N4H1896.5°109.8°
H15C12C14N538.5°179.6°
H15C12C14C1586.6°59.6°
H15C12C14H20150.8°60.4°
C14N5H19C16180.0°180.0°
N5C14C15H20120.2°120.0°
N5C14C15O3172.6°0.0°
C14N5C16O490.0°0.1°
C14N5C16N190.0°180.0°
N5C14C15N67.2°180.0°
H19N5C14C159.7°25.0°
H19N5C14H20110.1°145.0°
H19N5C16O490.0°180.0°
H19N5C16N190.0°0.0°
C14C15O3N6179.7°179.9°
C15C14N5C16170.4°155.0°
C14C15N6C17179.1°174.9°
C14C15N6H210.9°5.0°
H20C14C15O352.4°120.0°
H20C14N5C1669.9°35.0°
H20C14C15N6127.4°60.0°
O3C15N6C171.1°5.1°
O3C15N6H21178.9°174.9°
O4C16N5N190.0°179.9°
C17N6H21C15180.0°180.0°
N6C17C18C19122.9°120.0°
N6C17C18H22118.6°120.0°
N6C17C19H22119.6°120.0°
N6C17C18O538.3°13.5°
N6C17C19C2080.4°174.0°
N6C17C19H2341.1°54.0°
N6C17C19H24158.0°66.1°
N6C17C18N7141.7°166.4°
H21N6C17C18107.4°28.5°
H21N6C17C1915.4°91.5°
H21N6C17H22134.5°148.5°
C18C17C19H22118.6°120.0°
C17C18O5N7179.9°179.9°
C18C17C19C20157.8°66.1°
C18C17C19H2380.6°173.9°
C18C17C19H2436.2°53.9°
C17C18N7C23177.3°175.0°
C17C18N7H322.8°5.0°
C18C17N6C1572.6°151.5°
C19C17C18O584.6°106.5°
C17C19C20H23121.6°120.0°
C17C19C20H24121.6°120.0°
C17C19H23H24114.9°120.0°
C17C19C20C216.6°66.3°
C17C19C20C22129.0°173.7°
C17C19C20H25112.9°53.7°
C19C17N6C15164.6°88.5°
C19C17C18N795.4°73.6°
H22C17C18O5156.8°133.5°
H22C17C19C2039.2°54.0°
H22C17C19H23160.8°66.0°
H22C17C19H2482.4°173.9°
H22C17N6C1545.5°31.4°
H22C17C18N723.1°46.4°
O5C18N7C232.8°4.9°
O5C18N7H32177.2°175.1°
C20C19H23H24114.9°119.9°
C19C20C21C22123.6°120.0°
C19C20C21H25119.4°120.0°
C19C20C22H25118.0°120.0°
C19C20C21H26180.0°175.8°
C19C20C21H2760.0°55.9°
C19C20C21H2860.0°64.3°
C19C20C22H29180.0°60.0°
C19C20C22H3060.0°180.0°
C19C20C22H3160.0°60.0°
H23C19C20C21115.0°53.7°
H23C19C20C227.4°66.3°
H23C19C20H25125.5°173.7°
H24C19C20C21128.1°173.7°
H24C19C20C22109.4°53.7°
H24C19C20H258.7°66.3°
C21C20C22H25117.1°120.0°
C20C21H26H27120.0°120.0°
C20C21H26H28120.0°119.9°
C20C21H27H28120.0°120.1°
C21C20C22H2955.1°180.0°
C21C20C22H3064.9°60.0°
C21C20C22H31175.1°60.0°
C22C20C21H2656.4°64.1°
C22C20C21H27176.4°175.9°
C22C20C21H2863.5°55.8°
C20C22H29H30120.0°120.0°
C20C22H29H31120.0°120.1°
C20C22H30H31120.0°120.0°
H25C20C21H2660.6°55.9°
H25C20C21H2759.4°64.1°
H25C20C21H28179.4°175.8°
H25C20C22H2961.9°60.0°
H25C20C22H30178.0°60.0°
H25C20C22H3158.0°180.0°
H26C21H27H28120.0°120.0°
H29C22H30H31120.0°120.0°
C23N7H32C18180.0°180.0°
N7C23C24C25121.9°120.0°
N7C23C24H33118.9°120.1°
N7C23C25H33119.0°120.0°
N7C23C24O6174.5°65.0°
N7C23C24H3463.9°55.0°
N7C23C24H3552.8°175.0°
N7C23C25C2686.1°65.0°
N7C23C25H3735.3°55.0°
N7C23C25H38152.5°175.0°
H32N7C23C2467.0°95.0°
H32N7C23C2556.0°25.0°
H32N7C23H33174.7°145.0°
C24C23C25H33119.1°120.0°
C23C24O6H34121.7°120.0°
C23C24O6H35121.7°120.0°
C23C24H34H35114.6°120.0°
C23C24O6H36180.0°180.0°
C24C23C25C26152.0°175.0°
C24C23C25H3786.6°65.0°
C24C23C25H3830.6°55.0°
C24C23N7C18113.0°85.0°
C25C23C24O663.6°55.0°
C25C23C24H3458.1°175.0°
C25C23C24H35174.8°65.0°
C23C25C26H37121.4°120.0°
C23C25C26H38121.4°120.0°
C23C25H37H38115.5°119.9°
C23C25C26C27154.2°90.0°
C23C25C26C2826.3°90.3°
C25C23N7C18124.0°155.0°
H33C23C24O655.6°175.0°
H33C23C24H34177.3°65.0°
H33C23C24H3566.0°55.0°
H33C23C25C2632.9°55.0°
H33C23C25H37154.3°175.0°
H33C23C25H3888.5°65.0°
H33C23N7C185.3°35.0°
O6C24H34H35114.6°119.9°
H34C24O6H3658.3°60.0°
H35C24O6H3658.3°60.0°
C26C25H37H38115.5°120.1°
C25C26C27C28179.5°179.7°
C25C26C27C29179.5°180.0°
C25C26C27H390.5°0.0°
C25C26C28C30179.5°180.0°
C25C26C28H400.4°0.1°
H37C25C26C2732.8°30.0°
H37C25C26C28147.7°149.8°
H38C25C26C2784.4°150.0°
H38C25C26C2895.1°29.7°
C26C27C29H39180.0°180.0°
C27C26C28C300.0°0.2°
C27C26C28H40179.9°179.7°
C26C27C29C310.1°0.0°
C26C27C29H41179.9°180.0°
C28C26C27C290.0°0.3°
C28C26C27H39180.0°179.8°
C26C28C30H40180.0°179.9°
C26C28C30C310.0°0.0°
C26C28C30H42180.0°180.0°
C27C29C31H41180.0°180.0°
C27C29C31C300.2°0.3°
C27C29C31H43179.8°180.0°
H39C27C29C31179.9°180.0°
H39C27C29H410.1°0.0°
C28C30C31C290.2°0.3°
C28C30C31H42180.0°180.0°
C28C30C31H43179.9°180.0°
H40C28C30C31180.0°179.9°
H40C28C30H420.0°0.1°
C29C31C30H43180.0°179.7°
C29C31C30H42179.9°179.7°
H41C29C31C30179.8°179.8°
H41C29C31H430.2°0.1°
H42C30C31H430.1°0.0°

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon