Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

PRD_002162

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.50Å
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C2C3sing1.53Å1.52Å
C2H3sing1.09Å1.10Å
C2H4sing1.09Å1.10Å
C3C4sing1.53Å1.53Å
C3H5sing1.09Å1.10Å
C3H6sing1.09Å1.10Å
C4N1sing1.47Å1.43Å
C4H7sing1.09Å1.10Å
C4H8sing1.09Å1.10Å
N1C5sing1.37Å1.43Å
N1H9sing0.97Å1.00Å
C5N2doub1.30Å1.41Å
C5N3sing1.38Å1.31Å
N2H10sing0.97Å1.00Å
N3H11sing0.97Å1.00Å
N3H12sing0.97Å1.00Å
C6O1doub1.22Å1.20Å
C6N4sing1.35Å1.41Å
N4H13sing0.97Å1.00Å
N5C7sing1.46Å1.46Å
N5H14sing0.97Å1.00Å
C7C8sing1.51Å1.51Å
C7C9sing1.53Å1.52Å
C7H15sing1.09Å1.10Å
C8O2doub1.21Å1.20Å
C9O3sing1.43Å1.41Å
C9H16sing1.09Å1.10Å
C9H17sing1.09Å1.10Å
O3H18sing0.97Å0.95Å
N6C10sing1.46Å1.45Å
N6H19sing0.97Å1.00Å
C10C11sing1.51Å1.52Å
C10C12sing1.53Å1.54Å
C10H20sing1.09Å1.10Å
C11O4doub1.21Å1.19Å
C12C13sing1.53Å1.50Å
C12C14sing1.53Å1.51Å
C12H21sing1.09Å1.10Å
C13H22sing1.09Å1.10Å
C13H23sing1.09Å1.10Å
C13H24sing1.09Å1.10Å
C14H25sing1.09Å1.10Å
C14H26sing1.09Å1.10Å
C14H27sing1.09Å1.10Å
N7C15sing1.46Å1.46Å
C15C16sing1.51Å1.55Å
C15C17sing1.53Å1.51Å
C16O5doub1.21Å1.20Å
C16H28sing1.08Å1.08Å
C17C18sing1.53Å1.52Å
C18C19sing1.53Å1.51Å
C19N8sing1.47Å1.45Å
N8C20sing1.37Å1.32Å
C20N9sing1.33Å1.33Å
C20N10doub1.33Å1.31Å
N7H29sing0.97Å1.00Å
C15H30sing1.09Å1.10Å
C17H31sing1.09Å1.10Å
C17H32sing1.09Å1.10Å
C18H33sing1.09Å1.10Å
C18H34sing1.09Å1.10Å
C19H35sing1.09Å1.10Å
C19H36sing1.09Å1.10Å
N8H37sing0.97Å1.00Å
N9H38sing0.97Å1.00Å
N9H39sing0.97Å1.00Å
N10H40sing0.97Å1.00Å
N10H41sing0.97Å1.00Å
C1N4sing1.47Å1.44Å
C6N5sing1.35Å1.45Å
C8N6sing1.35Å1.32Å
C11N7sing1.35Å1.32Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1H1100.1°109.5°
C2C1H2100.2°109.5°
C1C2C3112.4°109.5°
C1C2H3108.7°109.5°
C1C2H4108.8°109.5°
C2C1N4144.4°109.5°
H1C1H2109.5°109.4°
H1C1N4100.2°109.5°
H2C1N4100.1°109.4°
C3C2H3108.8°109.5°
C3C2H4108.7°109.5°
C2C3C4108.8°109.5°
C2C3H5109.7°109.5°
C2C3H6109.6°109.5°
H3C2H4109.5°109.5°
C4C3H5109.6°109.5°
C4C3H6109.6°109.5°
C3C4N1103.5°109.5°
C3C4H7111.0°109.5°
C3C4H8110.9°109.5°
H5C3H6109.5°109.5°
N1C4H7110.9°109.5°
N1C4H8110.9°109.5°
C4N1C5116.6°120.0°
C4N1H9121.7°120.0°
H7C4H8109.5°109.5°
C5N1H9121.7°120.0°
N1C5N2117.5°120.0°
N1C5N3119.9°120.0°
N2C5N3122.6°120.0°
C5N2H10112.0°120.0°
C5N3H11120.0°120.0°
C5N3H12120.0°120.0°
H11N3H12120.0°120.0°
O1C6N4122.4°120.0°
O1C6N5119.4°120.0°
C6N4H13116.1°120.1°
C6N4C1127.9°120.0°
N4C6N5112.4°120.0°
H13N4C1116.1°119.9°
C7N5H14120.7°120.0°
N5C7C8108.3°109.5°
N5C7C9111.8°109.5°
N5C7H15109.2°109.5°
C7N5C6118.6°120.0°
H14N5C6120.7°120.0°
C8C7C9110.5°109.5°
C8C7H15108.5°109.5°
C7C8O2119.6°120.0°
C7C8N6116.3°120.0°
C9C7H15108.4°109.4°
C7C9O3111.0°109.5°
C7C9H16109.1°109.5°
C7C9H17109.1°109.5°
O2C8N6124.1°120.0°
O3C9H16109.1°109.5°
O3C9H17109.1°109.4°
C9O3H18109.5°114.0°
H16C9H17109.4°109.5°
C10N6H19117.2°120.0°
N6C10C11113.5°109.5°
N6C10C12110.5°109.5°
N6C10H20108.7°109.5°
C10N6C8125.6°120.0°
H19N6C8117.2°120.0°
C11C10C12108.6°109.5°
C11C10H20107.8°109.4°
C10C11O4121.6°120.0°
C10C11N7114.7°120.0°
C12C10H20107.6°109.4°
C10C12C13111.5°109.5°
C10C12C14111.3°109.5°
C10C12H21107.6°109.5°
O4C11N7123.7°119.9°
C13C12C14110.3°109.5°
C13C12H21108.1°109.5°
C12C13H22109.5°109.5°
C12C13H23109.4°109.5°
C12C13H24109.5°109.5°
C14C12H21108.0°109.4°
C12C14H25109.5°109.5°
C12C14H26109.5°109.5°
C12C14H27109.4°109.5°
H22C13H23109.5°109.4°
H22C13H24109.5°109.5°
H23C13H24109.5°109.5°
H25C14H26109.4°109.4°
H25C14H27109.5°109.5°
H26C14H27109.5°109.5°
N7C15C16116.5°109.5°
N7C15C17107.2°109.4°
C15N7H29117.3°120.0°
N7C15H30107.7°109.5°
C15N7C11125.3°120.0°
C16C15C17111.5°109.4°
C15C16O5118.6°120.0°
C15C16H28120.7°120.0°
C16C15H30106.5°109.5°
C15C17C18110.4°109.5°
C17C15H30107.0°109.5°
C15C17H31109.2°109.5°
C15C17H32109.2°109.5°
O5C16H28120.7°119.9°
C17C18C19114.2°109.5°
C18C17H31109.2°109.5°
C18C17H32109.3°109.4°
C17C18H33108.3°109.5°
C17C18H34108.3°109.5°
C18C19N8112.6°109.5°
C19C18H33108.2°109.5°
C19C18H34108.3°109.5°
C18C19H35108.7°109.5°
C18C19H36108.7°109.5°
C19N8C20124.2°120.0°
N8C19H35108.7°109.4°
N8C19H36108.7°109.5°
C19N8H37117.9°120.0°
N8C20N9120.4°120.0°
N8C20N10119.4°120.0°
C20N8H37117.9°120.0°
N9C20N10120.2°120.0°
C20N9H38120.0°120.0°
C20N9H39120.0°120.0°
C20N10H40120.0°120.0°
C20N10H41120.0°120.0°
H29N7C11117.4°120.0°
H31C17H32109.5°109.4°
H33C18H34109.5°109.5°
H35C19H36109.5°109.5°
H38N9H39120.0°120.0°
H40N10H41120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1H1H2104.7°120.0°
C2C1H1N4150.7°120.1°
C2C1H2N4150.7°120.0°
C1C2C3H3120.4°120.0°
C1C2C3H4120.4°120.0°
C1C2H3H4118.7°120.0°
C1C2C3C4108.8°180.0°
C1C2C3H511.1°60.0°
C1C2C3H6131.3°60.0°
C2C1N4C6165.3°180.0°
C2C1N4H1314.7°0.1°
H1C1H2N4104.7°120.0°
H1C1C2C350.1°60.0°
H1C1C2H370.3°60.0°
H1C1C2H4170.6°180.0°
H1C1N4C641.3°59.9°
H1C1N4H13138.7°120.0°
H2C1C2C362.0°60.0°
H2C1C2H3177.6°180.0°
H2C1C2H458.5°60.0°
H2C1N4C670.8°60.0°
H2C1N4H13109.2°120.1°
C3C2H3H4118.7°120.0°
C2C3C4H5119.9°120.0°
C2C3C4H6119.9°120.0°
C2C3H5H6120.3°120.0°
C2C3C4N190.7°180.0°
C2C3C4H728.4°60.0°
C2C3C4H8150.3°60.0°
C3C2C1N4174.1°180.0°
H3C2C3C4130.8°60.0°
H3C2C3H5109.3°180.0°
H3C2C3H610.9°60.0°
H3C2C1N453.7°60.0°
H4C2C3C411.7°60.0°
H4C2C3H5131.6°60.0°
H4C2C3H6108.3°180.0°
H4C2C1N465.5°60.0°
C4C3H5H6120.3°120.0°
C3C4N1H7119.1°120.0°
C3C4N1H8119.0°120.0°
C3C4H7H8122.8°120.0°
C3C4N1C583.7°180.0°
C3C4N1H996.3°0.1°
H5C3C4N1149.4°60.0°
H5C3C4H791.5°180.0°
H5C3C4H830.4°60.0°
H6C3C4N129.2°60.0°
H6C3C4H7148.3°60.0°
H6C3C4H889.8°NaN°
N1C4H7H8122.7°120.0°
C4N1C5H9180.0°179.9°
C4N1C5N2177.8°180.0°
C4N1C5N30.2°0.0°
H7C4N1C5157.2°60.0°
H7C4N1H922.8°119.9°
H8C4N1C535.4°60.1°
H8C4N1H9144.7°120.0°
N1C5N2N3177.9°180.0°
N1C5N2H10177.9°180.0°
N1C5N3H11177.9°0.0°
N1C5N3H122.2°180.0°
H9N1C5N22.2°0.1°
H9N1C5N3179.8°179.9°
N2C5N3H110.0°180.0°
N2C5N3H12180.0°0.0°
N3C5N2H100.0°0.0°
C5N3H11H12180.0°180.0°
O1C6N4N5152.8°180.0°
O1C6N4H13163.6°180.0°
O1C6N5C73.9°0.0°
O1C6N5H14176.1°180.0°
O1C6N4C116.4°0.1°
C6N4H13C1180.0°179.9°
N4C6N5C7157.6°180.0°
N4C6N5H1422.4°0.0°
H13N4C6N510.7°0.1°
C7N5H14C6180.0°180.0°
N5C7C8C9122.8°120.0°
N5C7C8H15118.5°120.0°
N5C7C9H15120.5°120.0°
N5C7C8O283.8°0.0°
N5C7C9O364.0°65.0°
N5C7C9H16175.8°175.0°
N5C7C9H1756.3°54.9°
N5C7C8N697.6°180.0°
H14N5C7C859.2°25.0°
H14N5C7C962.8°95.0°
H14N5C7H15177.2°145.0°
C8C7C9H15118.8°120.0°
C7C8O2N6178.5°179.9°
C8C7C9O356.8°55.0°
C8C7C9H1663.5°65.0°
C8C7C9H17177.0°175.0°
C7C8N6C10156.8°180.0°
C7C8N6H1923.2°0.0°
C8C7N5C6120.8°155.0°
C9C7C8O239.0°120.0°
C7C9O3H16120.2°120.0°
C7C9O3H17120.2°120.0°
C7C9H16H17119.3°120.0°
C7C9O3H1836.8°180.0°
C9C7N5C6117.2°85.0°
C9C7C8N6139.6°59.9°
H15C7C8O2157.7°120.0°
H15C7C9O3175.6°175.0°
H15C7C9H1655.3°55.0°
H15C7C9H1764.2°65.0°
H15C7N5C62.8°35.0°
H15C7C8N620.9°60.0°
O2C8N6C1024.6°0.0°
O2C8N6H19155.4°180.0°
O3C9H16H17119.3°119.9°
H16C9O3H1883.5°59.9°
H17C9O3H18157.0°60.1°
C10N6H19C8180.0°180.0°
N6C10C11C12123.2°120.0°
N6C10C11H20120.5°120.0°
N6C10C12H20118.5°120.0°
N6C10C11O483.6°10.0°
N6C10C12C13176.7°66.1°
N6C10C12C1453.2°53.9°
N6C10C12H2164.9°173.8°
N6C10C11N796.9°170.0°
H19N6C10C1174.8°25.0°
H19N6C10C1247.4°95.0°
H19N6C10H20165.3°145.0°
C11C10C12H20116.5°120.0°
C10C11O4N7179.5°180.0°
C11C10C12C1358.3°173.9°
C11C10C12C14178.2°66.1°
C11C10C12H2160.1°53.8°
C10C11N7C15175.5°175.3°
C10C11N7H294.5°4.7°
C11C10N6C8105.3°155.0°
C12C10C11O439.7°110.0°
C10C12C13C14124.1°120.0°
C10C12C13H21118.1°120.0°
C10C12C14H21117.9°120.0°
C10C12C13H22180.0°58.5°
C10C12C13H2360.0°178.4°
C10C12C13H2460.0°61.6°
C10C12C14H25180.0°60.0°
C10C12C14H2660.0°180.0°
C10C12C14H2760.0°60.0°
C12C10N6C8132.5°85.0°
C12C10C11N7139.9°70.0°
H20C10C11O4156.0°130.0°
H20C10C12C1358.2°53.9°
H20C10C12C1465.3°173.9°
H20C10C12H21176.5°66.1°
H20C10N6C814.7°35.0°
H20C10C11N723.6°50.0°
O4C11N7C154.9°4.7°
O4C11N7H29175.1°175.3°
C13C12C14H21117.9°120.0°
C12C13H22H23120.0°120.0°
C12C13H22H24120.0°120.1°
C12C13H23H24120.0°120.1°
C13C12C14H2555.8°180.0°
C13C12C14H2664.2°60.0°
C13C12C14H27175.8°60.0°
C14C12C13H2255.9°61.5°
C14C12C13H23175.9°58.4°
C14C12C13H2464.1°178.4°
C12C14H25H26120.0°120.0°
C12C14H25H27120.0°120.0°
C12C14H26H27120.0°120.0°
H21C12C13H2261.9°178.5°
H21C12C13H2358.0°61.6°
H21C12C13H24178.1°58.5°
H21C12C14H2562.1°60.0°
H21C12C14H26177.9°60.0°
H21C12C14H2757.9°180.0°
H22C13H23H24120.0°120.0°
H25C14H26H27120.0°120.0°
N7C15C16C17123.5°119.9°
N7C15C16H30120.1°120.1°
N7C15C17H30115.3°120.0°
N7C15C16O5162.6°0.1°
N7C15C16H2817.4°180.0°
N7C15C17C1863.8°65.1°
C15N7H29C11180.0°180.0°
N7C15C17H3156.3°55.0°
N7C15C17H32176.1°175.0°
C16C15C17H30116.1°120.0°
C15C16O5H28180.0°179.9°
C16C15C17C18167.6°175.0°
C16C15N7H2972.6°94.9°
C16C15C17H3172.3°64.9°
C16C15C17H3247.5°55.0°
C16C15N7C11107.4°85.0°
C17C15C16O539.2°120.1°
C17C15C16H28140.8°60.1°
C15C17C18H31120.1°120.1°
C15C17C18H32120.1°120.0°
C15C17C18C19173.7°180.0°
C17C15N7H2953.0°25.0°
C15C17H31H32119.6°120.0°
C15C17C18H3353.1°60.0°
C15C17C18H3465.6°60.0°
C17C15N7C11127.0°155.0°
O5C16C15H3077.3°120.0°
H28C16C15H30102.7°59.9°
C17C18C19H33120.7°120.0°
C17C18C19H34120.7°120.0°
C17C18C19N861.4°179.9°
C18C17C15H3051.5°55.0°
C18C17H31H32119.6°119.9°
C17C18H33H34117.8°120.0°
C17C18C19H35178.2°60.0°
C17C18C19H3659.1°60.0°
C18C19N8H35120.5°120.0°
C18C19N8H36120.5°120.1°
C18C19N8C20151.4°180.0°
C19C18C17H3166.1°59.9°
C19C18C17H3253.6°60.0°
C19C18H33H34117.8°120.0°
C18C19H35H36118.6°120.0°
C18C19N8H3728.6°0.1°
C19N8C20H37180.0°179.9°
C19N8C20N90.3°0.0°
C19N8C20N10178.4°179.9°
N8C19C18H3359.3°60.1°
N8C19C18H34177.9°59.9°
N8C19H35H36118.6°120.0°
N8C20N9N10178.7°179.9°
C20N8C19H3531.0°60.0°
C20N8C19H3688.1°60.0°
N8C20N9H38178.7°0.1°
N8C20N9H391.3°180.0°
N8C20N10H40178.7°0.1°
N8C20N10H411.3°180.0°
N9C20N8H37179.7°179.9°
C20N9H38H39179.9°179.9°
N9C20N10H400.0°180.0°
N9C20N10H41180.0°0.1°
N10C20N8H371.6°0.0°
N10C20N9H380.0°180.0°
N10C20N9H39180.0°0.1°
C20N10H40H41180.0°179.9°
H29N7C15H30167.8°145.0°
H30C15C17H31171.6°175.0°
H30C15C17H3268.7°65.0°
H30C15N7C1112.1°35.0°
H31C17C18H33173.2°179.9°
H31C17C18H3454.6°60.0°
H32C17C18H3367.1°60.0°
H32C17C18H34174.3°180.0°
H33C18C19H3561.1°180.0°
H33C18C19H36179.8°60.0°
H34C18C19H3557.5°60.0°
H34C18C19H3661.6°180.0°
H35C19N8H37149.0°120.0°
H36C19N8H3791.9°120.0°
C1N4C6N5169.3°180.0°

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon