Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

PRD_001252

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1doub1.21Å1.22Å
C1C2sing1.51Å1.50Å
C2H1sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C2H3sing1.09Å1.10Å
N1C3sing1.46Å1.45Å
N1H4sing0.97Å1.00Å
C3C4sing1.51Å1.50Å
C3C5sing1.53Å1.53Å
C3H5sing1.09Å1.10Å
C4O2doub1.21Å1.22Å
C5C6sing1.53Å1.53Å
C5C7sing1.53Å1.52Å
C5H6sing1.09Å1.10Å
C6C8sing1.53Å1.52Å
C6H7sing1.09Å1.10Å
C6H8sing1.09Å1.10Å
C7H9sing1.09Å1.10Å
C7H10sing1.09Å1.10Å
C7H11sing1.09Å1.10Å
C8H12sing1.09Å1.10Å
C8H13sing1.09Å1.10Å
C8H14sing1.09Å1.10Å
N2C9sing1.47Å1.45Å
N2H15sing0.97Å1.00Å
C9C10sing1.51Å1.51Å
C9C11sing1.53Å1.53Å
C9H16sing1.09Å1.10Å
C10O3doub1.21Å1.25Å
C11H17sing1.09Å1.10Å
C11H18sing1.09Å1.10Å
C11H19sing1.09Å1.10Å
N3C12sing1.47Å1.47Å
N3H20sing0.97Å1.00Å
C12C13sing1.51Å1.50Å
C12C14sing1.53Å1.52Å
C12H21sing1.09Å1.10Å
C13O4doub1.21Å1.23Å
C14O5sing1.43Å1.46Å
C14C15sing1.53Å1.51Å
C14H22sing1.09Å1.10Å
O5H23sing0.97Å0.95Å
C15H24sing1.09Å1.10Å
C15H25sing1.09Å1.10Å
C15H26sing1.09Å1.10Å
N4C16sing1.46Å1.43Å
N4H27sing0.97Å1.00Å
C16C17sing1.51Å1.54Å
C16C18sing1.53Å1.53Å
C16H28sing1.09Å1.10Å
C17O6doub1.21Å1.49Å
C18H29sing1.09Å1.10Å
C18H30sing1.09Å1.10Å
C18H31sing1.09Å1.10Å
C19CL1sing1.80Å109.41Å
C19H32sing1.09Å1.10Å
C19H33sing1.09Å1.10Å
C1N1sing1.35Å1.33Å
C4N2sing1.35Å1.33Å
C10N3sing1.35Å1.36Å
C13N4sing1.35Å1.31Å
C17C19sing1.51Å1.43Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2122.1°120.0°
O1C1N1122.4°120.0°
C1C2H1109.5°109.5°
C1C2H2109.5°109.4°
C1C2H3109.5°109.4°
C2C1N1115.5°120.0°
H1C2H2109.4°109.5°
H1C2H3109.5°109.5°
H2C2H3109.5°109.5°
C3N1H4118.9°120.0°
N1C3C4111.2°109.5°
N1C3C5110.6°109.5°
N1C3H5109.5°109.5°
C3N1C1122.2°120.0°
H4N1C1118.9°120.0°
C4C3C5108.3°109.5°
C4C3H5108.7°109.4°
C3C4O2120.7°120.0°
C3C4N2116.7°120.0°
C5C3H5108.4°109.5°
C3C5C6112.1°109.5°
C3C5C7109.7°109.5°
C3C5H6108.2°109.5°
O2C4N2122.5°120.0°
C6C5C7110.2°109.5°
C6C5H6108.2°109.4°
C5C6C8111.4°109.5°
C5C6H7109.0°109.4°
C5C6H8109.0°109.5°
C7C5H6108.3°109.5°
C5C7H9109.5°109.4°
C5C7H10109.5°109.4°
C5C7H11109.5°109.5°
C8C6H7109.0°109.4°
C8C6H8109.0°109.5°
C6C8H12109.5°109.4°
C6C8H13109.5°109.5°
C6C8H14109.4°109.4°
H7C6H8109.4°109.5°
H9C7H10109.5°109.5°
H9C7H11109.5°109.5°
H10C7H11109.5°109.5°
H12C8H13109.5°109.5°
H12C8H14109.5°109.4°
H13C8H14109.5°109.5°
C9N2H15118.9°120.0°
N2C9C10112.2°109.5°
N2C9C11106.9°109.4°
N2C9H16109.7°109.4°
C9N2C4122.3°120.0°
H15N2C4118.8°120.0°
C10C9C11110.3°109.5°
C10C9H16108.9°109.5°
C9C10O3119.5°120.0°
C9C10N3117.8°120.0°
C11C9H16108.6°109.4°
C9C11H17109.5°109.5°
C9C11H18109.5°109.4°
C9C11H19109.5°109.4°
O3C10N3122.6°120.0°
H17C11H18109.5°109.5°
H17C11H19109.5°109.5°
H18C11H19109.4°109.4°
C12N3H20119.9°120.0°
N3C12C13112.8°109.5°
N3C12C14113.8°109.4°
N3C12H21107.5°109.4°
C12N3C10120.2°120.0°
H20N3C10119.9°120.0°
C13C12C14108.5°109.5°
C13C12H21107.0°109.5°
C12C13O4122.4°120.1°
C12C13N4116.3°120.0°
C14C12H21106.9°109.5°
C12C14O5108.6°109.5°
C12C14C15112.1°109.5°
C12C14H22108.5°109.4°
O4C13N4121.3°120.0°
O5C14C15109.7°109.5°
O5C14H22109.3°109.5°
C14O5H23109.5°114.0°
C15C14H22108.6°109.5°
C14C15H24109.5°109.4°
C14C15H25109.5°109.5°
C14C15H26109.5°109.5°
H24C15H25109.4°109.5°
H24C15H26109.5°109.5°
H25C15H26109.5°109.5°
C16N4H27120.8°120.0°
N4C16C17110.4°109.5°
N4C16C18110.1°109.5°
N4C16H28108.2°109.4°
C16N4C13118.3°120.0°
H27N4C13120.8°120.0°
C17C16C18114.2°109.5°
C17C16H28106.8°109.4°
C16C17O6116.5°119.9°
C16C17C19111.0°120.0°
C18C16H28106.9°109.5°
C16C18H29109.5°109.4°
C16C18H30109.5°109.5°
C16C18H31109.5°109.5°
O6C17C1998.7°120.0°
H29C18H30109.5°109.4°
H29C18H31109.5°109.5°
H30C18H31109.5°109.5°
CL1C19H32122.1°109.5°
CL1C19H33122.1°109.5°
CL1C19C1745.8°109.5°
H32C19H33109.5°109.5°
H32C19C17122.1°109.4°
H33C19C17122.1°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2N1179.9°179.7°
O1C1C2H10.0°0.0°
O1C1C2H2120.0°120.1°
O1C1C2H3120.0°120.0°
O1C1N1C30.7°0.0°
O1C1N1H4179.3°180.0°
C1C2H1H2120.0°120.0°
C1C2H1H3120.0°120.0°
C1C2H2H3120.0°119.9°
C2C1N1C3179.2°179.7°
C2C1N1H40.8°0.3°
H1C2H2H3120.0°120.1°
H1C2C1N1179.9°179.7°
H2C2C1N159.9°59.7°
H3C2C1N160.1°60.3°
C3N1H4C1180.0°180.0°
N1C3C4C5121.7°120.0°
N1C3C4H5120.6°120.0°
N1C3C5H5120.1°120.0°
N1C3C4O258.1°20.0°
N1C3C5C660.3°60.0°
N1C3C5C7176.9°180.0°
N1C3C5H658.9°60.0°
N1C3C4N2125.9°160.0°
H4N1C3C4104.3°120.0°
H4N1C3C516.1°120.0°
H4N1C3H5135.6°0.0°
C4C3C5H5117.8°120.0°
C3C4O2N2175.7°180.0°
C4C3C5C6177.6°180.0°
C4C3C5C754.8°60.0°
C4C3C5H663.2°60.0°
C3C4N2C9178.2°180.0°
C3C4N2H151.9°0.0°
C4C3N1C175.7°60.0°
C5C3C4O263.6°100.0°
C3C5C6C7122.5°120.0°
C3C5C6H6119.3°120.0°
C3C5C7H6117.9°120.0°
C3C5C6C8169.7°175.0°
C3C5C6H770.0°65.1°
C3C5C6H849.4°54.9°
C3C5C7H9180.0°60.1°
C3C5C7H1060.0°180.0°
C3C5C7H1160.0°60.0°
C5C3N1C1163.9°60.0°
C5C3C4N2112.3°80.0°
H5C3C4O2178.8°140.0°
H5C3C5C659.8°60.0°
H5C3C5C763.0°60.0°
H5C3C5H6179.0°180.0°
H5C3N1C144.4°180.0°
H5C3C4N25.3°40.0°
O2C4N2C92.3°0.0°
O2C4N2H15177.7°180.0°
C6C5C7H6118.2°120.0°
C5C6C8H7120.3°119.9°
C5C6C8H8120.3°120.1°
C5C6H7H8119.1°120.0°
C6C5C7H956.1°60.0°
C6C5C7H10176.1°60.0°
C6C5C7H1163.9°180.0°
C5C6C8H12180.0°60.1°
C5C6C8H1360.0°59.9°
C5C6C8H1460.0°180.0°
C7C5C6C867.8°65.0°
C7C5C6H752.5°55.0°
C7C5C6H8171.9°175.0°
C5C7H9H10120.0°119.9°
C5C7H9H11120.0°120.1°
C5C7H10H11120.0°120.0°
H6C5C6C850.4°55.0°
H6C5C6H7170.7°174.9°
H6C5C6H869.9°65.0°
H6C5C7H962.1°179.9°
H6C5C7H1057.9°60.0°
H6C5C7H11177.9°60.0°
C8C6H7H8119.1°120.1°
C6C8H12H13120.0°120.1°
C6C8H12H14120.0°119.9°
C6C8H13H14120.0°120.0°
H7C6C8H1259.7°180.0°
H7C6C8H13179.7°60.0°
H7C6C8H1460.3°60.1°
H8C6C8H1259.7°60.0°
H8C6C8H1360.3°180.0°
H8C6C8H14179.7°59.9°
H9C7H10H11120.0°120.1°
H12C8H13H14120.0°120.0°
C9N2H15C4180.0°180.0°
N2C9C10C11119.1°120.0°
N2C9C10H16121.7°120.0°
N2C9C11H16118.4°119.9°
N2C9C10O339.1°0.0°
N2C9C11H17180.0°60.0°
N2C9C11H1860.0°60.1°
N2C9C11H1960.0°180.0°
N2C9C10N3143.8°180.0°
H15N2C9C1090.4°25.0°
H15N2C9C1130.7°95.0°
H15N2C9H16148.4°145.0°
C10C9C11H16119.4°120.1°
C9C10O3N3176.9°180.0°
C10C9C11H1757.7°180.0°
C10C9C11H18177.7°59.9°
C10C9C11H1962.3°60.0°
C9C10N3C12178.1°180.0°
C9C10N3H201.9°0.1°
C10C9N2C489.7°155.0°
C11C9C10O380.0°120.0°
C9C11H17H18120.0°120.0°
C9C11H17H19120.0°120.0°
C9C11H18H19120.0°119.9°
C11C9N2C4149.2°85.0°
C11C9C10N397.1°60.0°
H16C9C10O3160.8°120.0°
H16C9C11H1761.6°60.0°
H16C9C11H1858.4°180.0°
H16C9C11H19178.3°60.1°
H16C9N2C431.6°34.9°
H16C9C10N322.1°60.0°
O3C10N3C121.1°0.0°
O3C10N3H20178.9°180.0°
H17C11H18H19120.0°120.0°
C12N3H20C10180.0°179.9°
N3C12C13C14127.0°120.0°
N3C12C13H21118.0°120.0°
N3C12C14H21118.4°120.0°
N3C12C13O438.5°0.0°
N3C12C14O5177.3°65.0°
N3C12C14C1555.9°55.0°
N3C12C14H2264.0°175.0°
N3C12C13N4143.9°180.0°
H20N3C12C1373.5°25.1°
H20N3C12C1450.7°94.9°
H20N3C12H21168.8°145.1°
C13C12C14H21115.1°120.1°
C12C13O4N4177.4°180.0°
C13C12C14O550.8°55.0°
C13C12C14C1570.6°175.0°
C13C12C14H22169.5°65.0°
C12C13N4C16179.1°180.0°
C12C13N4H270.9°0.0°
C13C12N3C10106.5°155.0°
C14C12C13O488.5°120.0°
C12C14O5C15122.9°120.0°
C12C14O5H22118.2°120.0°
C12C14C15H22119.9°120.0°
C12C14O5H2356.7°60.0°
C12C14C15H24180.0°60.0°
C12C14C15H2560.0°180.0°
C12C14C15H2660.0°60.0°
C14C12N3C10129.3°85.0°
C14C12C13N489.0°60.0°
H21C12C13O4156.5°120.0°
H21C12C14O564.3°175.0°
H21C12C14C15174.4°64.9°
H21C12C14H2254.4°55.0°
H21C12N3C1011.2°35.0°
H21C12C13N425.9°60.0°
O4C13N4C163.4°0.0°
O4C13N4H27176.7°180.0°
O5C14C15H22119.3°120.0°
O5C14C15H2459.3°60.0°
O5C14C15H25179.2°60.0°
O5C14C15H2660.8°180.0°
C15C14O5H2366.2°60.0°
C14C15H24H25120.0°120.0°
C14C15H24H26120.0°120.0°
C14C15H25H26120.0°120.0°
H22C14O5H23174.9°180.0°
H22C14C15H2460.1°180.0°
H22C14C15H2559.9°60.0°
H22C14C15H26179.9°60.0°
H24C15H25H26120.0°120.0°
C16N4H27C13180.0°180.0°
N4C16C17C18124.7°120.1°
N4C16C17H28117.4°119.9°
N4C16C18H28117.2°120.0°
N4C16C17O67.9°15.1°
N4C16C18H29180.0°59.9°
N4C16C18H3060.0°60.0°
N4C16C18H3160.0°180.0°
N4C16C17C19103.9°165.0°
H27N4C16C1784.7°25.1°
H27N4C16C1842.3°95.0°
H27N4C16H28158.8°145.0°
C17C16C18H28117.9°120.0°
C16C17O6C19118.8°179.9°
C17C16C18H2955.1°180.0°
C17C16C18H30175.1°60.1°
C17C16C18H3164.9°60.0°
C16C17C19CL10.6°180.0°
C16C17C19H32106.0°60.0°
C16C17C19H33104.8°59.9°
C17C16N4C1395.3°155.0°
C18C16C17O6116.8°105.0°
C16C18H29H30120.0°119.9°
C16C18H29H31120.0°120.0°
C16C18H30H31120.0°120.0°
C18C16N4C13137.7°85.0°
C18C16C17C19131.4°74.9°
H28C16C17O6125.3°135.0°
H28C16C18H2962.8°60.0°
H28C16C18H3057.2°179.9°
H28C16C18H31177.2°60.0°
H28C16N4C1321.2°35.0°
H28C16C17C1913.5°45.0°
O6C17C19CL1122.2°0.0°
O6C17C19H3216.8°120.0°
O6C17C19H33132.4°120.0°
H29C18H30H31120.0°120.0°
CL1C19H32H33152.6°120.0°
CL1C19H32C1754.7°120.0°
CL1C19H33C1754.7°120.0°
H32C19H33C17152.6°120.0°

248636

PDB entries from 2026-02-04

PDB statisticsPDBj update infoContact PDBjnumon