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PRD_001005

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.38Å1.39ÅAromatic
C1C6sing1.38Å1.39ÅAromatic
C2C32sing1.38Å1.39ÅAromatic
CL3C31sing1.74Å1.78Å
C4C5sing1.38Å1.39ÅAromatic
C4C32doub1.38Å1.39ÅAromatic
C5C6doub1.38Å1.39ÅAromatic
C6C7sing1.51Å1.51Å
C7S8sing1.81Å1.67Å
S8N9sing1.66Å1.61Å
S8O15doub1.42Å1.43Å
S8O16doub1.42Å1.44Å
N9C10sing1.46Å1.45Å
C10C11sing1.53Å1.53Å
C10C13sing1.51Å1.50Å
C11C12sing1.53Å1.52Å
C12C35sing1.53Å1.53Å
C12C39sing1.53Å1.53Å
C13N14sing1.35Å1.33Å
C13O17doub1.21Å1.22Å
N14C18sing1.47Å1.47Å
N14C25sing1.47Å1.47Å
C18C19sing1.51Å1.50Å
C18C23sing1.54Å1.53Å
C19O20doub1.21Å1.22Å
C19N21sing1.35Å1.33Å
N21C22sing1.47Å1.46Å
C22C26sing1.51Å1.51Å
C23C24sing1.55Å1.52Å
C24C25sing1.55Å1.52Å
C26C27doub1.38Å1.39ÅAromatic
C26C33sing1.38Å1.38ÅAromatic
C27C28sing1.51Å1.51Å
C27C29sing1.38Å1.39ÅAromatic
C28N34sing1.47Å1.45Å
C29C30doub1.38Å1.39ÅAromatic
C30C31sing1.38Å1.38ÅAromatic
C31C33doub1.38Å1.38ÅAromatic
C35C36sing1.53Å1.52Å
C36C37sing1.53Å1.52Å
C37C38sing1.53Å1.53Å
C38C39sing1.53Å1.52Å
C1H1sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C4H4sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
N9HN9sing0.97Å1.00Å
C10H10sing1.09Å1.10Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
C12H12sing1.09Å1.10Å
C18H18sing1.09Å1.10Å
N21HN21sing0.97Å1.00Å
C22H22sing1.09Å1.10Å
C22H22Asing1.09Å1.10Å
C23H23sing1.09Å1.10Å
C23H23Asing1.09Å1.10Å
C24H24sing1.09Å1.10Å
C24H24Asing1.09Å1.10Å
C25H25sing1.09Å1.10Å
C25H25Asing1.09Å1.10Å
C28H28sing1.09Å1.10Å
C28H28Asing1.09Å1.10Å
C29H29sing1.08Å1.08Å
C30H30sing1.08Å1.08Å
C32H32sing1.08Å1.08Å
C33H33sing1.08Å1.08Å
N34HN34sing1.01Å1.00Å
N34HN3Asing1.01Å1.00Å
C35H35sing1.09Å1.10Å
C35H35Asing1.09Å1.10Å
C36H36sing1.09Å1.10Å
C36H36Asing1.09Å1.10Å
C37H37sing1.09Å1.10Å
C37H37Asing1.09Å1.10Å
C38H38sing1.09Å1.10Å
C38H38Asing1.09Å1.10Å
C39H39sing1.09Å1.10Å
C39H39Asing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6119.9°120.0°
C1C2C32120.1°120.0°
C2C1H1120.1°120.0°
C1C2H2120.0°120.0°
C1C6C5120.0°120.1°
C1C6C7119.9°120.0°
C6C1H1120.1°120.0°
C2C32C4120.0°120.0°
C32C2H2119.9°120.0°
C2C32H32120.0°120.0°
CL3C31C30119.3°120.0°
CL3C31C33119.2°120.0°
C5C4C32120.0°120.0°
C4C5C6120.0°119.9°
C5C4H4120.0°120.0°
C4C5H5120.0°120.0°
C32C4H4120.0°120.0°
C4C32H32120.0°120.0°
C5C6C7120.0°119.9°
C6C5H5120.0°120.0°
C6C7S8109.4°109.5°
C6C7H7109.5°109.5°
C6C7H7A109.5°109.4°
C7S8N9108.8°104.5°
C7S8O15107.9°110.5°
C7S8O16110.8°110.5°
S8C7H7109.5°109.5°
S8C7H7A109.5°109.5°
N9S8O15109.8°104.3°
N9S8O16108.9°104.3°
S8N9C10122.4°120.0°
S8N9HN9105.4°120.0°
O15S8O16110.6°121.0°
N9C10C11107.7°109.5°
N9C10C13109.1°109.4°
C10N9HN9105.4°120.0°
N9C10H10111.6°109.5°
C11C10C13111.5°109.4°
C10C11C12114.2°109.5°
C11C10H10109.2°109.5°
C10C11H11107.9°109.5°
C10C11H11A107.9°109.5°
C10C13N14118.3°120.0°
C10C13O17119.7°120.0°
C13C10H10107.8°109.4°
C11C12C35109.0°109.5°
C11C12C39110.3°109.5°
C12C11H11107.9°109.4°
C12C11H11A107.9°109.5°
C11C12H12109.3°109.5°
C35C12C39109.8°109.4°
C12C35C36110.8°109.5°
C35C12H12109.9°109.5°
C12C35H35109.0°109.5°
C12C35H35A109.0°109.5°
C12C39C38109.5°109.5°
C39C12H12108.5°109.5°
C12C39H39109.5°109.5°
C12C39H39A109.5°109.5°
N14C13O17122.0°120.0°
C13N14C18119.7°125.6°
C13N14C25126.7°125.7°
C18N14C25113.5°108.7°
N14C18C19113.0°109.9°
N14C18C23103.8°107.2°
N14C18H18111.1°109.9°
N14C25C24103.9°104.7°
N14C25H25111.4°110.4°
N14C25H25A111.3°110.4°
C19C18C23109.8°109.8°
C18C19O20121.1°120.0°
C18C19N21117.4°120.0°
C19C18H18105.3°109.9°
C18C23C24105.5°103.0°
C23C18H18114.2°110.0°
C18C23H23110.8°110.7°
C18C23H23A110.8°110.7°
O20C19N21121.4°120.0°
C19N21C22122.4°120.0°
C19N21HN21118.8°120.0°
N21C22C26114.5°109.4°
C22N21HN21118.8°120.0°
N21C22H22107.8°109.5°
N21C22H22A107.9°109.4°
C22C26C27121.7°120.0°
C22C26C33118.5°120.0°
C26C22H22107.8°109.5°
C26C22H22A107.8°109.5°
C23C24C25106.5°101.5°
C24C23H23110.8°110.7°
C24C23H23A110.8°110.7°
C23C24H24110.5°111.0°
C23C24H24A110.5°111.0°
C25C24H24110.4°111.2°
C25C24H24A110.5°110.9°
C24C25H25111.4°110.5°
C24C25H25A111.4°110.4°
C27C26C33119.9°120.0°
C26C27C28121.2°119.9°
C26C27C29120.1°120.1°
C26C33C31119.5°120.0°
C26C33H33120.3°120.0°
C28C27C29118.7°120.0°
C27C28N34110.4°109.5°
C27C28H28109.2°109.4°
C27C28H28A109.2°109.5°
C27C29C30120.4°120.0°
C27C29H29119.8°120.0°
N34C28H28109.1°109.5°
N34C28H28A109.1°109.5°
C28N34HN34109.5°111.0°
C28N34HN3A109.5°111.0°
C29C30C31118.7°120.0°
C30C29H29119.8°120.0°
C29C30H30120.7°120.0°
C30C31C33121.5°120.0°
C31C30H30120.7°120.0°
C31C33H33120.2°120.0°
C35C36C37111.1°109.5°
C36C35H35109.0°109.5°
C36C35H35A109.0°109.5°
C35C36H36108.9°109.4°
C35C36H36A108.9°109.4°
C36C37C38111.8°109.5°
C37C36H36108.9°109.5°
C37C36H36A108.9°109.5°
C36C37H37108.7°109.4°
C36C37H37A108.7°109.5°
C37C38C39111.3°109.4°
C38C37H37108.7°109.4°
C38C37H37A108.7°109.5°
C37C38H38108.9°109.5°
C37C38H38A108.9°109.4°
C39C38H38108.9°109.5°
C39C38H38A108.9°109.5°
C38C39H39109.4°109.5°
C38C39H39A109.5°109.4°
H7C7H7A109.4°109.5°
H11C11H11A111.0°109.5°
H22C22H22A111.1°109.5°
H23C23H23A108.1°110.8°
H24C24H24A108.5°110.9°
H25C25H25A107.5°110.4°
H28C28H28A109.8°109.5°
HN34N34HN3A109.4°111.0°
H35C35H35A109.9°109.5°
H36C36H36A110.0°109.5°
H37C37H37A110.3°109.5°
H38C38H38A110.1°109.5°
H39C39H39A109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6H1180.0°179.7°
C1C2C32H2180.0°180.0°
C1C2C32C40.4°0.1°
C2C1C6C50.3°0.0°
C2C1C6C7179.5°180.0°
C1C2C32H32179.7°180.0°
C6C1C2C320.4°0.0°
C1C6C5C40.2°0.1°
C1C6C5C7179.2°180.0°
C1C6C7S887.0°85.1°
C6C1C2H2179.6°180.0°
C1C6C5H5179.8°180.0°
C1C6C7H7152.9°154.9°
C1C6C7H7A33.0°34.9°
C2C32C4C50.2°0.1°
C2C32C4H32180.0°179.9°
C32C2C1H1179.6°179.7°
C2C32C4H4179.8°180.0°
CL3C31C33C26179.8°179.6°
CL3C31C30C29179.8°180.0°
CL3C31C30C33179.3°179.7°
CL3C31C30H300.2°0.0°
CL3C31C33H330.2°0.0°
C5C4C32H4180.0°179.9°
C4C5C6H5180.0°180.0°
C4C5C6C7179.3°179.9°
C5C4C32H32179.8°180.0°
C32C4C5C60.1°0.1°
C4C32C2H2179.6°179.9°
C32C4C5H5179.9°179.9°
C5C6C7S892.1°94.9°
C5C6C1H1179.7°179.7°
C6C5C4H4179.8°180.0°
C5C6C7H727.9°25.1°
C5C6C7H7A147.9°145.1°
C6C7S8H7120.0°120.0°
C6C7S8H7A120.0°120.0°
C6C7S8N967.8°175.4°
C6C7S8O15173.2°63.8°
C6C7S8O1652.0°73.0°
C7C6C1H10.5°0.3°
C7C6C5H50.7°0.0°
C6C7H7H7A120.0°120.0°
C7S8N9O15117.9°116.0°
C7S8N9O16120.9°116.1°
C7S8O15O16121.3°131.5°
C7S8N9C1096.3°64.9°
S8C7H7H7A120.1°120.1°
C7S8N9HN9143.7°115.0°
N9S8O15O16120.2°116.8°
S8N9C10HN9120.0°180.0°
S8N9C10C11156.7°97.9°
S8N9C10C1382.1°142.1°
N9S8C7H752.2°64.6°
N9S8C7H7A172.3°55.4°
S8N9C10H1036.9°22.2°
O15S8N9C1021.6°51.1°
O15S8C7H766.8°176.2°
O15S8C7H7A53.2°56.2°
O15S8N9HN998.4°128.9°
O16S8N9C10142.8°179.0°
O16S8C7H7172.0°47.0°
O16S8C7H7A68.0°167.1°
O16S8N9HN922.8°1.0°
N9C10C11C13119.6°120.0°
N9C10C11H10121.4°120.1°
N9C10C13H10121.4°120.0°
N9C10C11C12177.6°52.1°
N9C10C13N14131.5°177.6°
N9C10C13O1748.7°2.4°
N9C10C11H1162.4°67.8°
N9C10C11H11A57.6°172.2°
C11C10C13H10119.8°120.0°
C10C11C12H11120.0°120.0°
C10C11C12H11A120.0°120.1°
C10C11C12C35165.7°168.6°
C10C11C12C3973.7°71.4°
C11C10C13N14109.7°62.4°
C11C10C13O1770.1°117.6°
C11C10N9HN983.3°82.1°
C10C11H11H11A118.0°120.0°
C10C11C12H1245.6°48.6°
C13C10C11C1262.8°67.8°
C10C13N14O17179.8°180.0°
C10C13N14C18178.9°180.0°
C10C13N14C251.0°0.3°
C13C10N9HN937.9°37.9°
C13C10C11H1157.2°172.2°
C13C10C11H11A177.2°52.2°
C11C12C35C39120.9°119.9°
C11C12C35H12119.8°120.1°
C11C12C39H12119.8°120.0°
C11C12C35C36179.8°180.0°
C11C12C39C38179.9°180.0°
C12C11C10H1056.2°172.2°
C12C11H11H11A118.1°120.0°
C11C12C35H3559.8°60.1°
C11C12C35H35A60.2°60.0°
C11C12C39H3960.1°59.9°
C11C12C39H39A59.9°60.1°
C35C12C39H12120.1°120.0°
C12C35C36H35120.0°120.0°
C12C35C36H35A120.0°120.0°
C12C35C36C3755.6°60.0°
C35C12C39C3860.0°60.1°
C35C12C11H1145.8°48.7°
C35C12C11H11A74.3°71.3°
C12C35H35H35A119.5°120.0°
C12C35C36H3664.4°60.0°
C12C35C36H36A175.6°180.0°
C35C12C39H3960.0°60.0°
C35C12C39H39A180.0°180.0°
C39C12C35C3659.3°60.0°
C12C39C38C3757.8°60.1°
C12C39C38H39120.0°120.1°
C12C39C38H39A120.0°120.0°
C39C12C11H11166.3°168.6°
C39C12C11H11A46.3°48.6°
C39C12C35H35179.3°180.0°
C39C12C35H35A60.7°60.0°
C12C39C38H3862.2°59.9°
C12C39C38H38A177.7°180.0°
C12C39H39H39A120.0°120.0°
C13N14C18C25178.2°179.7°
C13N14C18C1948.0°59.6°
C13N14C18C23166.8°179.0°
C13N14C25C24177.2°155.9°
N14C13C10H1010.1°57.6°
C13N14C18H1870.0°61.4°
C13N14C25H2557.2°85.2°
C13N14C25H25A62.7°37.1°
O17C13N14C181.3°0.0°
O17C13N14C25179.2°179.7°
O17C13C10H10170.1°122.4°
N14C18C19C23115.3°117.7°
N14C18C19H18121.3°121.1°
N14C18C23H18121.1°119.5°
N14C18C19O2043.9°0.1°
N14C18C19N21135.8°180.0°
N14C18C23C2422.8°22.1°
C18N14C25C244.8°24.5°
N14C18C23H2397.2°140.5°
N14C18C23H23A142.8°96.2°
C18N14C25H25124.8°94.5°
C18N14C25H25A115.3°143.2°
C25N14C18C19130.2°120.7°
C25N14C18C2311.3°1.3°
N14C25C24C2319.2°37.3°
N14C25C24H25120.0°118.8°
N14C25C24H25A120.0°118.8°
C25N14C18H18111.8°118.3°
N14C25C24H24139.2°80.8°
N14C25C24H24A100.8°155.3°
N14C25H25H25A122.2°122.3°
C19C18C23H18117.9°121.1°
C18C19O20N21179.7°179.9°
C18C19N21C22178.4°180.0°
C19C18C23C24143.8°97.2°
C18C19N21HN211.6°0.1°
C19C18C23H2323.8°21.2°
C19C18C23H23A96.2°144.5°
C23C18C19O2071.4°117.8°
C23C18C19N21108.9°62.3°
C18C23C24H23120.0°118.4°
C18C23C24H23A120.0°118.3°
C18C23C24C2526.4°35.6°
C18C23H23H23A121.6°123.2°
C18C23C24H24146.4°82.6°
C18C23C24H24A93.6°153.5°
O20C19N21C221.9°0.1°
O20C19C18H18165.2°121.0°
O20C19N21HN21178.1°180.0°
C19N21C22HN21180.0°180.0°
C19N21C22C26105.6°179.9°
N21C19C18H1814.4°58.9°
C19N21C22H22134.4°60.0°
C19N21C22H22A14.4°60.1°
N21C22C26H22120.0°120.0°
N21C22C26H22A120.0°120.0°
N21C22C26C27101.3°80.1°
N21C22C26C3379.6°100.3°
N21C22H22H22A118.0°120.0°
C22C26C27C33179.2°179.6°
C22C26C27C280.7°0.1°
C22C26C27C29178.9°179.9°
C22C26C33C31179.1°179.7°
C26C22N21HN2174.4°0.0°
C26C22H22H22A117.9°120.1°
C22C26C33H330.9°0.1°
C23C24C25H24120.0°118.1°
C23C24C25H24A120.0°118.0°
C24C23C18H1898.3°141.7°
C24C23H23H23A121.7°123.2°
C23C24H24H24A121.2°123.9°
C23C24C25H25139.2°81.6°
C23C24C25H25A100.8°156.0°
C25C24C23H2393.6°154.0°
C25C24C23H23A146.4°82.7°
C25C24H24H24A121.2°123.9°
C24C25H25H25A122.3°122.4°
C26C27C28C29179.6°180.0°
C26C27C28N34101.9°80.1°
C26C27C29C300.1°0.0°
C27C26C33C310.1°0.7°
C27C26C22H22138.8°39.9°
C27C26C22H22A18.8°160.0°
C26C27C28H28138.1°160.0°
C26C27C28H28A18.1°40.0°
C26C27C29H29179.9°179.9°
C27C26C33H33179.9°179.7°
C33C26C27C28179.9°179.7°
C33C26C27C290.3°0.3°
C26C33C31C300.5°0.7°
C26C33C31H33180.0°179.6°
C33C26C22H2240.4°139.7°
C33C26C22H22A160.4°19.6°
C27C28N34H28120.0°119.9°
C27C28N34H28A120.0°120.0°
C28C27C29C30179.4°179.9°
C27C28H28H28A119.6°120.0°
C28C27C29H290.5°0.0°
C27C28N34HN34180.0°56.0°
C27C28N34HN3A60.0°180.0°
C29C27C28N3478.5°100.0°
C27C29C30H29180.0°179.9°
C27C29C30C310.7°0.1°
C29C27C28H2841.5°20.0°
C29C27C28H28A161.5°140.0°
C27C29C30H30179.2°180.0°
N34C28H28H28A119.6°120.1°
C28N34HN34HN3A120.0°124.0°
C29C30C31H30180.0°179.9°
C29C30C31C331.0°0.3°
C31C30C29H29179.3°180.0°
C30C31C33H33179.5°179.7°
C33C31C30H30179.0°179.7°
C35C36C37H36120.0°120.0°
C35C36C37H36A120.0°119.9°
C35C36C37C3853.1°60.0°
C36C35C12H1260.0°60.0°
C36C35H35H35A119.5°120.0°
C35C36H36H36A119.3°120.0°
C35C36C37H37173.1°180.0°
C35C36C37H37A66.9°60.0°
C36C37C38H37120.0°119.9°
C36C37C38H37A120.0°120.0°
C36C37C38C3954.6°60.0°
C37C36C35H35175.6°180.0°
C37C36C35H35A64.4°60.0°
C37C36H36H36A119.3°120.1°
C36C37H37H37A119.1°120.0°
C36C37C38H3865.4°60.0°
C36C37C38H38A174.6°180.0°
C37C38C39H38120.0°120.0°
C37C38C39H38A120.0°119.9°
C38C37C36H3666.9°59.9°
C38C37C36H36A173.1°180.0°
C38C37H37H37A119.0°120.0°
C37C38H38H38A119.2°120.0°
C37C38C39H3962.2°60.0°
C37C38C39H39A177.7°180.0°
C38C39C12H1260.1°60.0°
C39C38C37H37174.6°180.0°
C39C38C37H37A65.4°60.0°
C39C38H38H38A119.3°120.1°
C38C39H39H39A120.0°119.9°
H1C1C2H20.4°0.3°
H2C2C32H320.4°0.0°
H4C4C5H50.1°0.0°
H4C4C32H320.2°0.1°
HN9N9C10H10156.9°157.9°
H10C10C11H11176.2°52.3°
H10C10C11H11A63.8°67.8°
H11C11C12H1274.4°71.4°
H11AC11C12H12165.6°168.6°
H12C12C35H3560.0°60.0°
H12C12C35H35A180.0°180.0°
H12C12C39H39179.9°180.0°
H12C12C39H39A59.9°60.0°
H18C18C23H23141.7°99.9°
H18C18C23H23A21.7°23.4°
HN21N21C22H2245.6°120.0°
HN21N21C22H22A165.7°120.0°
H23C23C24H2426.4°35.8°
H23C23C24H24A146.5°88.0°
H23AC23C24H2493.6°159.1°
H23AC23C24H24A26.4°35.2°
H24C24C25H25100.8°160.3°
H24C24C25H25A19.2°38.0°
H24AC24C25H2519.2°36.4°
H24AC24C25H25A139.2°85.9°
H28C28N34HN3460.0°63.9°
H28C28N34HN3A180.0°60.0°
H28AC28N34HN3460.0°176.0°
H28AC28N34HN3A60.0°60.0°
H29C29C30H300.8°0.1°
H35C35C36H3655.6°60.0°
H35C35C36H36A64.4°60.0°
H35AC35C36H36175.6°180.0°
H35AC35C36H36A55.6°60.0°
H36C36C37H3753.1°60.0°
H36C36C37H37A173.1°179.9°
H36AC36C37H3766.9°60.1°
H36AC36C37H37A53.1°60.0°
H37C37C38H3854.6°60.0°
H37C37C38H38A65.4°60.1°
H37AC37C38H38174.6°180.0°
H37AC37C38H38A54.6°60.0°
H38C38C39H39177.8°180.0°
H38C38C39H39A57.8°60.0°
H38AC38C39H3957.7°59.9°
H38AC38C39H39A62.3°60.0°

227344

PDB entries from 2024-11-13

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