Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

PRD_000913

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C4C1sing1.42Å0.00ÅAromatic
C1C2doub1.35Å0.00ÅAromatic
C1H1sing1.08Å0.00Å
O1C2sing1.34Å0.00ÅAromatic
C2C3sing1.51Å0.00Å
C3H2sing1.09Å0.00Å
C3H3sing1.09Å0.00Å
C3H4sing1.09Å0.00Å
N1O1sing1.21Å0.00ÅAromatic
C4N1doub1.31Å0.00ÅAromatic
C5C4sing1.48Å0.00Å
O2C5doub1.21Å0.00Å
N2C6sing1.46Å1.45Å
N2H5sing0.97Å1.00Å
C6C7sing1.51Å1.51Å
C6C8sing1.53Å1.53Å
C6H6sing1.09Å1.10Å
C7O3doub1.21Å1.22Å
C8H7sing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C8H9sing1.09Å1.10Å
N3C9sing1.47Å1.46Å
N3H10sing0.97Å1.00Å
C9C10sing1.51Å1.51Å
C9C11sing1.53Å1.53Å
C9H11sing1.09Å1.10Å
C10O4doub1.21Å1.22Å
C11C12sing1.53Å1.52Å
C11C13sing1.53Å1.53Å
C11H12sing1.09Å1.10Å
C12H13sing1.09Å1.10Å
C12H14sing1.09Å1.10Å
C12H15sing1.09Å1.10Å
C13H16sing1.09Å1.10Å
C13H17sing1.09Å1.10Å
C13H18sing1.09Å1.10Å
N4C14sing1.46Å1.46Å
N4H19sing0.97Å1.00Å
C14C15sing1.51Å1.51Å
C14C16sing1.53Å1.52Å
C14H20sing1.09Å1.10Å
C15O5doub1.21Å1.22Å
C16C17sing1.53Å1.53Å
C16H21sing1.09Å1.10Å
C16H22sing1.09Å1.10Å
C17C18sing1.53Å1.52Å
C17C19sing1.53Å1.53Å
C17H23sing1.09Å1.10Å
C18H24sing1.09Å1.10Å
C18H25sing1.09Å1.10Å
C18H26sing1.09Å1.10Å
C19H27sing1.09Å1.10Å
C19H28sing1.09Å1.10Å
C19H29sing1.09Å1.10Å
O6C24doub1.21Å1.23Å
N7C24sing1.35Å1.33Å
C24C23sing1.51Å1.50Å
C23C22sing1.53Å1.52Å
C22C21sing1.53Å1.52Å
C21N6sing1.46Å1.46Å
C21C20sing1.51Å1.50Å
C20N5doub1.28Å1.26Å
C20H30sing1.08Å1.08Å
N5H31sing0.97Å1.00Å
C21H32sing1.09Å1.10Å
N6H33sing0.97Å1.00Å
C22H34sing1.09Å1.10Å
C22H35sing1.09Å1.10Å
C23H36sing1.09Å1.10Å
C23H37sing1.09Å1.10Å
N7H38sing0.97Å1.00Å
N7H39sing0.97Å1.00Å
C5N2sing1.35Å41.77Å
C7N3sing1.35Å1.33Å
C10N4sing1.35Å1.33Å
C15N6sing1.35Å1.33Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C4C1C290.0°103.9°
C4C1H190.0°128.0°
C1C4N190.0°106.1°
C1C4C590.0°126.9°
C2C1H190.0°128.0°
C1C2O190.0°106.6°
C1C2C390.0°126.7°
O1C2C390.0°126.7°
C2O1N190.0°111.8°
C2C3H290.0°109.5°
C2C3H390.0°109.5°
C2C3H490.0°109.5°
H2C3H390.0°109.4°
H2C3H490.0°109.5°
H3C3H490.0°109.5°
O1N1C490.0°111.5°
N1C4C590.0°127.0°
C4C5O290.0°120.0°
C4C5N290.0°120.0°
O2C5N290.0°120.0°
C6N2H5147.6°120.0°
N2C6C7110.7°109.5°
N2C6C8110.3°109.5°
N2C6H6109.5°109.5°
C6N2C564.7°120.0°
H5N2C5147.6°120.0°
C7C6C8109.0°109.4°
C7C6H6108.8°109.5°
C6C7O3120.4°120.0°
C6C7N3116.8°120.0°
C8C6H6108.5°109.5°
C6C8H7109.5°109.5°
C6C8H8109.5°109.5°
C6C8H9109.5°109.5°
O3C7N3122.8°120.0°
H7C8H8109.5°109.4°
H7C8H9109.5°109.5°
H8C8H9109.4°109.4°
C9N3H10119.0°120.0°
N3C9C10110.8°109.5°
N3C9C11105.0°109.5°
N3C9H11111.4°109.5°
C9N3C7122.1°120.0°
H10N3C7118.9°120.0°
C10C9C11108.4°109.5°
C10C9H11110.7°109.5°
C9C10O4120.4°120.0°
C9C10N4118.1°120.0°
C11C9H11110.4°109.4°
C9C11C12111.2°109.5°
C9C11C13112.2°109.4°
C9C11H12107.4°109.5°
O4C10N4121.4°120.0°
C12C11C13110.9°109.5°
C12C11H12107.4°109.5°
C11C12H13109.5°109.5°
C11C12H14109.4°109.5°
C11C12H15109.5°109.5°
C13C11H12107.4°109.5°
C11C13H16109.5°109.5°
C11C13H17109.4°109.4°
C11C13H18109.5°109.5°
H13C12H14109.5°109.4°
H13C12H15109.5°109.5°
H14C12H15109.5°109.5°
H16C13H17109.5°109.5°
H16C13H18109.4°109.5°
H17C13H18109.5°109.4°
C14N4H19120.0°120.0°
N4C14C15111.0°109.5°
N4C14C16105.6°109.5°
N4C14H20109.9°109.5°
C14N4C10120.0°120.0°
H19N4C10120.0°120.0°
C15C14C16111.9°109.4°
C15C14H20109.3°109.4°
C14C15O5122.0°119.9°
C14C15N6114.9°120.0°
C16C14H20109.1°109.4°
C14C16C17110.2°109.5°
C14C16H21109.3°109.5°
C14C16H22109.3°109.5°
O5C15N6123.2°120.0°
C17C16H21109.3°109.4°
C17C16H22109.3°109.5°
C16C17C18109.9°109.5°
C16C17C19113.3°109.5°
C16C17H23108.0°109.5°
H21C16H22109.5°109.4°
C18C17C19109.2°109.4°
C18C17H23108.2°109.5°
C17C18H24109.5°109.5°
C17C18H25109.5°109.5°
C17C18H26109.5°109.5°
C19C17H23108.0°109.4°
C17C19H27109.5°109.4°
C17C19H28109.5°109.5°
C17C19H29109.5°109.4°
H24C18H25109.4°109.5°
H24C18H26109.5°109.5°
H25C18H26109.5°109.5°
H27C19H28109.5°109.5°
H27C19H29109.4°109.5°
H28C19H29109.5°109.5°
O6C24N7124.2°120.0°
O6C24C23120.1°120.0°
N7C24C23115.7°120.0°
C24N7H38120.0°120.0°
C24N7H39120.0°119.9°
C24C23C22107.1°109.5°
C24C23H36110.0°109.5°
C24C23H37110.1°109.5°
C23C22C21110.8°109.5°
C23C22H34109.1°109.5°
C23C22H35109.1°109.5°
C22C23H36110.1°109.5°
C22C23H37110.0°109.5°
C22C21N6101.6°109.5°
C22C21C20108.1°109.5°
C22C21H32109.6°109.4°
C21C22H34109.1°109.4°
C21C22H35109.1°109.5°
N6C21C20116.8°109.5°
N6C21H32110.4°109.5°
C21N6H33118.0°120.0°
C21N6C15123.9°120.0°
C21C20N5117.9°120.0°
C21C20H30121.1°120.0°
C20C21H32109.8°109.5°
N5C20H30121.1°120.1°
C20N5H31112.0°120.0°
H33N6C15118.1°120.0°
H34C22H35109.5°109.4°
H36C23H37109.5°109.4°
H38N7H39120.0°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C4C1C2H190.0°179.7°
C4C1C2O190.0°0.3°
C4C1C2C390.0°179.8°
C1C4N1O190.0°0.4°
C1C4N1C590.0°179.6°
C1C4C5O290.0°0.0°
C1C4C5N290.0°180.0°
C1C2O1C390.0°179.9°
C1C2C3H290.0°90.1°
C1C2C3H390.0°150.0°
C1C2C3H490.0°30.0°
C1C2O1N190.0°0.1°
C2C1C4N190.0°0.5°
C2C1C4C590.0°179.9°
H1C1C2O190.0°180.0°
H1C1C2C390.0°0.1°
H1C1C4N190.0°179.9°
H1C1C4C590.0°0.3°
O1C2C3H290.0°90.0°
O1C2C3H390.0°29.9°
O1C2C3H490.0°149.9°
C2O1N1C490.0°0.2°
C2C3H2H390.0°120.0°
C2C3H2H490.0°120.0°
C2C3H3H490.0°120.0°
C3C2O1N190.0°180.0°
H2C3H3H490.0°120.0°
O1N1C4C590.0°180.0°
N1C4C5O290.0°179.5°
N1C4C5N290.0°0.5°
C4C5O2N290.0°179.9°
C4C5N2C690.0°180.0°
C4C5N2H590.0°0.0°
O2C5N2C690.0°0.1°
O2C5N2H590.0°180.0°
C6N2H5C5180.0°180.0°
N2C6C7C8121.6°120.0°
N2C6C7H6120.3°120.0°
N2C6C8H6119.9°120.0°
N2C6C7O341.5°0.0°
N2C6C8H7180.0°180.0°
N2C6C8H860.0°60.1°
N2C6C8H960.0°59.9°
N2C6C7N3139.4°179.9°
H5N2C6C738.4°25.0°
H5N2C6C882.3°95.0°
H5N2C6H6158.3°145.0°
C7C6C8H6118.3°120.0°
C6C7O3N3179.1°180.0°
C7C6C8H758.2°60.0°
C7C6C8H8178.2°180.0°
C7C6C8H961.8°60.0°
C6C7N3C9179.5°180.0°
C6C7N3H100.6°0.1°
C7C6N2C5141.6°155.0°
C8C6C7O380.1°120.0°
C6C8H7H8120.0°120.0°
C6C8H7H9120.0°120.1°
C6C8H8H9120.0°120.1°
C8C6N2C597.6°85.1°
C8C6C7N399.1°60.0°
H6C6C7O3161.8°120.0°
H6C6C8H760.1°60.0°
H6C6C8H859.9°60.0°
H6C6C8H9179.9°180.0°
H6C6N2C521.7°35.0°
H6C6C7N319.1°60.0°
O3C7N3C90.4°0.0°
O3C7N3H10179.7°180.0°
H7C8H8H9120.0°119.9°
C9N3H10C7180.0°179.9°
N3C9C10C11114.7°120.0°
N3C9C10H11124.1°120.0°
N3C9C11H11120.1°120.0°
N3C9C10O457.2°19.9°
N3C9C11C12165.4°64.0°
N3C9C11C1369.7°56.0°
N3C9C11H1248.1°176.0°
N3C9C10N4123.1°160.1°
H10N3C9C1049.1°25.0°
H10N3C9C1167.7°95.0°
H10N3C9H11172.8°145.0°
C10C9C11H11121.4°120.0°
C9C10O4N4179.7°180.0°
C10C9C11C1247.0°176.0°
C10C9C11C13171.8°64.0°
C10C9C11H1270.3°56.0°
C9C10N4C14179.5°175.8°
C9C10N4H190.5°4.3°
C10C9N3C7130.9°155.0°
C11C9C10O457.5°100.1°
C9C11C12C13125.6°120.0°
C9C11C12H12117.3°120.0°
C9C11C13H12117.8°120.0°
C9C11C12H13180.0°65.8°
C9C11C12H1460.0°174.2°
C9C11C12H1560.0°54.2°
C9C11C13H16180.0°60.0°
C9C11C13H1760.0°180.0°
C9C11C13H1860.0°60.1°
C11C9N3C7112.3°85.0°
C11C9C10N4122.2°79.9°
H11C9C10O4178.7°139.9°
H11C9C11C1274.4°56.0°
H11C9C11C1350.4°176.0°
H11C9C11H12168.3°64.0°
H11C9N3C77.2°35.0°
H11C9C10N41.0°40.0°
O4C10N4C140.1°4.2°
O4C10N4H19179.9°175.8°
C12C11C13H12117.1°120.0°
C11C12H13H14120.0°120.0°
C11C12H13H15120.0°120.0°
C11C12H14H15120.0°120.0°
C12C11C13H1655.0°180.0°
C12C11C13H1765.1°60.0°
C12C11C13H18174.9°59.9°
C13C11C12H1354.4°54.1°
C13C11C12H14174.4°65.8°
C13C11C12H1565.6°174.2°
C11C13H16H17120.0°120.0°
C11C13H16H18120.0°120.1°
C11C13H17H18120.0°120.0°
H12C11C12H1362.7°174.2°
H12C11C12H1457.3°54.2°
H12C11C12H15177.3°65.8°
H12C11C13H1662.2°60.0°
H12C11C13H17177.8°60.0°
H12C11C13H1857.8°179.9°
H13C12H14H15120.0°120.0°
H16C13H17H18120.0°120.0°
C14N4H19C10180.0°180.0°
N4C14C15C16117.7°120.0°
N4C14C15H20121.4°120.1°
N4C14C16H20118.0°120.1°
N4C14C15O581.3°0.1°
N4C14C16C1777.2°65.0°
N4C14C16H2142.9°55.0°
N4C14C16H22162.7°175.0°
N4C14C15N698.2°180.0°
H19N4C14C15105.2°25.0°
H19N4C14C1616.3°95.0°
H19N4C14H20133.8°145.0°
C15C14C16H20121.1°119.9°
C14C15O5N6179.4°180.0°
C15C14C16C17162.0°175.0°
C15C14C16H2177.9°65.0°
C15C14C16H2241.8°54.9°
C14C15N6C21178.1°180.0°
C14C15N6H331.9°0.0°
C15C14N4C1074.8°155.0°
C16C14C15O536.4°120.1°
C14C16C17H21120.1°120.0°
C14C16C17H22120.1°120.1°
C14C16H21H22119.6°120.0°
C14C16C17C18148.5°175.0°
C14C16C17C1926.0°65.1°
C14C16C17H2393.7°54.9°
C16C14N4C10163.7°85.0°
C16C14C15N6144.1°60.0°
H20C14C15O5157.3°120.0°
H20C14C16C1740.9°55.1°
H20C14C16H21161.0°175.0°
H20C14C16H2279.2°65.0°
H20C14N4C1046.2°35.0°
H20C14C15N623.2°59.9°
O5C15N6C211.4°0.0°
O5C15N6H33178.6°179.9°
C17C16H21H22119.7°120.0°
C16C17C18C19124.9°120.0°
C16C17C18H23117.7°120.1°
C16C17C19H23119.7°120.1°
C16C17C18H24180.0°60.0°
C16C17C18H2560.0°180.0°
C16C17C18H2660.0°60.0°
C16C17C19H27180.0°60.0°
C16C17C19H2860.0°180.0°
C16C17C19H2960.0°60.0°
H21C16C17C1891.4°55.0°
H21C16C17C19146.1°175.0°
H21C16C17H2326.4°65.0°
H22C16C17C1828.4°64.9°
H22C16C17C1994.1°55.0°
H22C16C17H23146.2°175.0°
C18C17C19H23117.5°119.9°
C17C18H24H25120.0°120.0°
C17C18H24H26120.0°120.0°
C17C18H25H26120.0°120.0°
C18C17C19H2757.2°180.0°
C18C17C19H2862.9°60.0°
C18C17C19H29177.1°60.0°
C19C17C18H2455.1°60.0°
C19C17C18H25175.1°60.0°
C19C17C18H2664.9°180.0°
C17C19H27H28120.0°120.0°
C17C19H27H29120.0°119.9°
C17C19H28H29120.0°120.0°
H23C17C18H2462.2°179.9°
H23C17C18H2557.7°59.9°
H23C17C18H26177.7°60.1°
H23C17C19H2760.3°60.1°
H23C17C19H28179.6°59.9°
H23C17C19H2959.6°180.0°
H24C18H25H26120.0°120.0°
H27C19H28H29119.9°120.1°
O6C24N7C23179.6°179.9°
O6C24C23C2228.0°0.1°
O6C24C23H36147.7°120.1°
O6C24C23H3791.6°120.0°
O6C24N7H380.0°180.0°
O6C24N7H39180.0°0.1°
N7C24C23C22151.6°180.0°
N7C24C23H3632.0°60.0°
N7C24C23H3788.7°59.9°
C24N7H38H39180.0°179.9°
C24C23C22H36119.6°120.0°
C24C23C22H37119.6°120.1°
C24C23C22C21170.3°180.0°
C24C23C22H3469.4°60.0°
C24C23C22H3550.1°60.0°
C24C23H36H37121.1°120.0°
C23C24N7H38179.6°0.1°
C23C24N7H390.4°180.0°
C23C22C21H34120.2°120.0°
C23C22C21H35120.2°120.1°
C23C22C21N6136.7°65.0°
C23C22C21C2099.8°175.0°
C23C22C21H3219.8°55.0°
C23C22H34H35119.4°120.0°
C22C23H36H37121.1°120.0°
C22C21N6C20117.4°120.0°
C22C21N6H32116.2°119.9°
C22C21C20H32119.5°119.9°
C22C21C20N5103.6°120.0°
C22C21C20H3076.4°60.0°
C22C21N6H3325.7°25.0°
C21C22H34H35119.4°119.9°
C21C22C23H3650.7°60.0°
C21C22C23H3770.0°59.9°
C22C21N6C15154.3°155.0°
N6C21C20H32126.7°120.0°
N6C21C20N5142.6°0.0°
N6C21C20H3037.4°180.0°
C21N6H33C15180.0°180.0°
N6C21C22H34103.1°55.1°
N6C21C22H3516.5°175.0°
C21C20N5H30180.0°180.0°
C21C20N5H31180.0°180.0°
C20C21N6H3391.6°95.0°
C20C21C22H3420.4°65.0°
C20C21C22H35140.0°55.0°
C20C21N6C1588.3°85.0°
N5C20C21H3215.9°120.0°
H30C20N5H310.0°0.0°
H30C20C21H32164.1°59.9°
H32C21N6H33141.9°144.9°
H32C21C22H34140.0°175.0°
H32C21C22H35100.4°65.1°
H32C21N6C1538.1°35.0°
H34C22C23H36170.9°180.0°
H34C22C23H3750.2°60.1°
H35C22C23H3669.5°60.0°
H35C22C23H37169.8°180.0°

246905

PDB entries from 2025-12-31

PDB statisticsPDBj update infoContact PDBjnumon