Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

PRD_000815

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1doub1.21Å1.24Å
C1C2sing1.51Å1.53Å
C2H1sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C2H3sing1.09Å1.10Å
N1C3sing1.47Å1.48Å
N1H4sing0.97Å1.00Å
C3C4sing1.51Å1.53Å
C3C5sing1.53Å1.52Å
C3H5sing1.09Å1.10Å
C4O2doub1.21Å1.23Å
C5O3sing1.43Å1.42Å
C5C6sing1.53Å1.53Å
C5H6sing1.09Å1.10Å
O3H7sing0.97Å0.95Å
C6H8sing1.09Å1.10Å
C6H9sing1.09Å1.10Å
C6H10sing1.09Å1.10Å
N2C7sing1.46Å1.46Å
N2H11sing0.97Å1.00Å
C7C8sing1.51Å1.54Å
C7C9sing1.53Å1.55Å
C7H12sing1.09Å1.10Å
C8O4doub1.21Å1.23Å
C9C10sing1.53Å1.53Å
C9C11sing1.53Å1.54Å
C9H13sing1.09Å1.10Å
C10H14sing1.09Å1.10Å
C10H15sing1.09Å1.10Å
C10H16sing1.09Å1.10Å
C11H17sing1.09Å1.10Å
C11H18sing1.09Å1.10Å
C11H19sing1.09Å1.10Å
N3C12sing1.47Å1.46Å
N3H20sing0.97Å1.00Å
C12C13sing1.51Å1.51Å
C12C14sing1.53Å1.55Å
C12H21sing1.09Å1.10Å
C13O5doub1.21Å1.23Å
C14C15sing1.53Å1.54Å
C14H22sing1.09Å1.10Å
C14H23sing1.09Å1.10Å
C15C16sing1.53Å1.54Å
C15C20sing1.53Å1.55Å
C15H24sing1.09Å1.10Å
C16C17sing1.53Å1.55Å
C16H25sing1.09Å1.10Å
C16H26sing1.09Å1.10Å
C17C18sing1.53Å1.54Å
C17H27sing1.09Å1.10Å
C17H28sing1.09Å1.10Å
C18C19sing1.53Å1.55Å
C18H29sing1.09Å1.10Å
C18H30sing1.09Å1.10Å
C19C20sing1.53Å1.54Å
C19H31sing1.09Å1.10Å
C19H32sing1.09Å1.10Å
C20H33sing1.09Å1.10Å
C20H34sing1.09Å1.10Å
N4C21sing1.46Å1.48Å
N4H35sing0.97Å1.00Å
C21C22sing1.53Å1.54Å
C21C26sing1.51Å1.54Å
C21H36sing1.09Å1.10Å
C22C23sing1.51Å1.53Å
C22H37sing1.09Å1.10Å
C22H38sing1.09Å1.10Å
C23N5sing1.34Å1.33ÅAromatic
C23C24doub1.35Å1.33ÅAromatic
N5C25doub1.30Å1.33ÅAromatic
N5H39sing0.97Å1.00Å
C24N6sing1.37Å1.33ÅAromatic
C24H40sing1.08Å1.08Å
C25N6sing1.35Å1.33ÅAromatic
C25H41sing1.08Å1.08Å
N6H42sing0.97Å1.00Å
C26O6doub1.21Å1.23Å
C26H43sing1.08Å1.08Å
C1N1sing1.35Å1.34Å
C4N2sing1.35Å1.32Å
C8N3sing1.35Å1.34Å
C13N4sing1.35Å1.32Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2120.1°120.0°
O1C1N1124.9°120.0°
C1C2H1109.5°109.5°
C1C2H2109.5°109.5°
C1C2H3109.5°109.5°
C2C1N1115.0°120.0°
H1C2H2109.5°109.5°
H1C2H3109.5°109.4°
H2C2H3109.5°109.5°
C3N1H4118.8°119.9°
N1C3C4106.1°109.5°
N1C3C5112.1°109.5°
N1C3H5109.6°109.4°
C3N1C1122.4°120.0°
H4N1C1118.8°120.0°
C4C3C5111.0°109.4°
C4C3H5109.0°109.5°
C3C4O2120.8°120.0°
C3C4N2114.6°120.0°
C5C3H5109.1°109.4°
C3C5O3108.4°109.4°
C3C5C6111.9°109.5°
C3C5H6108.3°109.5°
O2C4N2124.6°120.0°
O3C5C6110.3°109.5°
O3C5H6109.6°109.5°
C5O3H7109.5°114.0°
C6C5H6108.2°109.4°
C5C6H8109.5°109.5°
C5C6H9109.5°109.5°
C5C6H10109.5°109.5°
H8C6H9109.4°109.5°
H8C6H10109.5°109.5°
H9C6H10109.5°109.5°
C7N2H11119.0°120.0°
N2C7C8109.7°109.5°
N2C7C9109.8°109.5°
N2C7H12109.5°109.5°
C7N2C4122.0°120.1°
H11N2C4119.0°119.9°
C8C7C9110.9°109.5°
C8C7H12108.6°109.5°
C7C8O4120.6°120.0°
C7C8N3113.8°120.0°
C9C7H12108.3°109.4°
C7C9C10111.2°109.5°
C7C9C11112.7°109.5°
C7C9H13107.6°109.4°
O4C8N3125.6°120.0°
C10C9C11109.5°109.5°
C10C9H13107.9°109.5°
C9C10H14109.5°109.5°
C9C10H15109.5°109.5°
C9C10H16109.5°109.5°
C11C9H13107.8°109.5°
C9C11H17109.5°109.5°
C9C11H18109.5°109.5°
C9C11H19109.5°109.5°
H14C10H15109.5°109.4°
H14C10H16109.4°109.5°
H15C10H16109.5°109.5°
H17C11H18109.5°109.5°
H17C11H19109.5°109.5°
H18C11H19109.5°109.5°
C12N3H20118.2°120.0°
N3C12C13104.1°109.5°
N3C12C14112.7°109.4°
N3C12H21111.1°109.5°
C12N3C8123.6°120.0°
H20N3C8118.2°120.0°
C13C12C14108.6°109.5°
C13C12H21110.4°109.4°
C12C13O5119.6°120.0°
C12C13N4116.4°120.0°
C14C12H21109.9°109.5°
C12C14C15114.5°109.5°
C12C14H22108.2°109.5°
C12C14H23108.2°109.5°
O5C13N4124.0°119.9°
C15C14H22108.2°109.5°
C15C14H23108.2°109.5°
C14C15C16108.2°109.5°
C14C15C20112.4°109.5°
C14C15H24108.6°109.4°
H22C14H23109.5°109.4°
C16C15C20110.5°109.5°
C16C15H24108.6°109.5°
C15C16C17114.3°109.5°
C15C16H25108.3°109.5°
C15C16H26108.3°109.5°
C20C15H24108.5°109.5°
C15C20C19111.5°109.4°
C15C20H33109.0°109.5°
C15C20H34109.0°109.4°
C17C16H25108.2°109.4°
C17C16H26108.3°109.5°
C16C17C18112.9°109.5°
C16C17H27108.6°109.5°
C16C17H28108.6°109.5°
H25C16H26109.5°109.5°
C18C17H27108.6°109.5°
C18C17H28108.6°109.5°
C17C18C19113.7°109.5°
C17C18H29108.4°109.5°
C17C18H30108.4°109.5°
H27C17H28109.4°109.4°
C19C18H29108.4°109.5°
C19C18H30108.4°109.5°
C18C19C20112.0°109.5°
C18C19H31108.9°109.5°
C18C19H32108.8°109.5°
H29C18H30109.4°109.5°
C20C19H31108.8°109.5°
C20C19H32108.9°109.5°
C19C20H33109.0°109.5°
C19C20H34109.0°109.5°
H31C19H32109.4°109.4°
H33C20H34109.5°109.5°
C21N4H35120.6°120.0°
N4C21C22110.1°109.5°
N4C21C26108.3°109.5°
N4C21H36108.6°109.5°
C21N4C13118.8°120.0°
H35N4C13120.6°120.0°
C22C21C26114.1°109.5°
C22C21H36107.8°109.4°
C21C22C23110.2°109.5°
C21C22H37109.3°109.5°
C21C22H38109.3°109.5°
C26C21H36107.8°109.5°
C21C26O6123.5°120.0°
C21C26H43118.2°120.0°
C23C22H37109.3°109.5°
C23C22H38109.3°109.4°
C22C23N5126.0°126.0°
C22C23C24126.5°126.0°
H37C22H38109.5°109.4°
N5C23C24107.5°108.0°
C23N5C25108.2°109.2°
C23N5H39125.9°125.4°
C23C24N6108.8°106.8°
C23C24H40125.6°126.6°
C25N5H39125.9°125.4°
N5C25N6108.1°108.8°
N5C25H41125.9°125.6°
N6C24H40125.6°126.6°
C24N6C25107.4°107.2°
C24N6H42126.3°126.4°
N6C25H41125.9°125.7°
C25N6H42126.3°126.4°
O6C26H43118.3°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2N1178.6°179.7°
O1C1C2H10.0°0.1°
O1C1C2H2120.0°120.0°
O1C1C2H3120.0°120.0°
O1C1N1C32.9°0.0°
O1C1N1H4177.1°180.0°
C1C2H1H2120.0°120.1°
C1C2H1H3120.0°120.0°
C1C2H2H3120.0°120.0°
C2C1N1C3178.6°179.7°
C2C1N1H41.4°0.4°
H1C2H2H3120.0°120.0°
H1C2C1N1178.6°179.7°
H2C2C1N161.4°59.7°
H3C2C1N158.6°60.3°
C3N1H4C1180.0°179.9°
N1C3C4C5122.0°120.0°
N1C3C4H5117.9°120.0°
N1C3C5H5121.5°120.0°
N1C3C4O257.9°16.9°
N1C3C5O360.5°60.4°
N1C3C5C6177.6°59.6°
N1C3C5H658.4°179.5°
N1C3C4N2119.8°163.0°
H4N1C3C494.0°25.0°
H4N1C3C527.3°94.9°
H4N1C3H5148.5°145.1°
C4C3C5H5120.0°120.0°
C3C4O2N2177.5°179.9°
C4C3C5O3178.9°59.6°
C4C3C5C659.2°179.6°
C4C3C5H660.0°60.5°
C3C4N2C7178.2°174.1°
C3C4N2H111.8°5.9°
C4C3N1C186.0°155.0°
C5C3C4O264.1°103.1°
C3C5O3C6122.9°120.0°
C3C5O3H6118.1°120.0°
C3C5C6H6119.3°120.0°
C3C5O3H7180.0°60.0°
C3C5C6H8180.0°64.6°
C3C5C6H960.0°175.4°
C3C5C6H1060.0°55.4°
C5C3N1C1152.7°85.0°
C5C3C4N2118.2°77.0°
H5C3C4O2175.8°136.9°
H5C3C5O361.0°179.6°
H5C3C5C660.9°60.4°
H5C3C5H6179.9°59.5°
H5C3N1C131.5°35.0°
H5C3C4N21.9°43.0°
O2C4N2C70.6°5.8°
O2C4N2H11179.4°174.2°
O3C5C6H6119.9°120.1°
O3C5C6H859.2°55.4°
O3C5C6H9179.2°64.6°
O3C5C6H1060.8°175.3°
C6C5O3H757.1°180.0°
C5C6H8H9120.0°120.0°
C5C6H8H10120.0°120.0°
C5C6H9H10120.0°120.0°
H6C5O3H762.0°60.0°
H6C5C6H860.7°175.4°
H6C5C6H959.3°55.4°
H6C5C6H10179.3°64.6°
H8C6H9H10120.0°120.0°
C7N2H11C4180.0°180.0°
N2C7C8C9121.5°120.0°
N2C7C8H12119.7°120.0°
N2C7C9H12119.6°120.0°
N2C7C8O452.7°15.4°
N2C7C9C10172.0°65.5°
N2C7C9C1148.7°54.5°
N2C7C9H1370.0°174.5°
N2C7C8N3128.0°164.6°
H11N2C7C867.5°25.0°
H11N2C7C954.5°95.0°
H11N2C7H12173.4°145.1°
C8C7C9H12119.0°120.0°
C7C8O4N3179.2°180.0°
C8C7C9C1066.6°174.5°
C8C7C9C11170.0°65.5°
C8C7C9H1351.3°54.5°
C7C8N3C12178.2°174.9°
C7C8N3H201.9°5.2°
C8C7N2C4112.5°155.0°
C9C7C8O468.7°104.6°
C7C9C10C11125.2°120.0°
C7C9C10H13117.8°120.0°
C7C9C11H13118.6°120.0°
C7C9C10H14180.0°66.9°
C7C9C10H1560.0°173.2°
C7C9C10H1660.0°53.2°
C7C9C11H17180.0°60.0°
C7C9C11H1860.0°180.0°
C7C9C11H1960.0°60.0°
C9C7N2C4125.4°85.0°
C9C7C8N3110.5°75.4°
H12C7C8O4172.4°135.4°
H12C7C9C1052.4°54.5°
H12C7C9C1171.0°174.5°
H12C7C9H13170.3°65.6°
H12C7N2C46.6°34.9°
H12C7C8N38.4°44.5°
O4C8N3C121.1°5.1°
O4C8N3H20178.9°174.9°
C10C9C11H13117.1°120.0°
C9C10H14H15120.0°120.0°
C9C10H14H16120.0°120.0°
C9C10H15H16120.0°120.0°
C10C9C11H1755.7°180.0°
C10C9C11H1864.3°60.0°
C10C9C11H19175.7°60.0°
C11C9C10H1454.8°53.2°
C11C9C10H15174.8°66.8°
C11C9C10H1665.2°173.2°
C9C11H17H18120.0°120.0°
C9C11H17H19120.0°120.0°
C9C11H18H19120.0°120.0°
H13C9C10H1462.2°173.2°
H13C9C10H1557.8°53.2°
H13C9C10H16177.8°66.8°
H13C9C11H1761.4°60.0°
H13C9C11H18178.6°60.0°
H13C9C11H1958.6°180.0°
H14C10H15H16120.0°120.0°
H17C11H18H19120.0°120.0°
C12N3H20C8180.0°179.9°
N3C12C13C14120.2°120.0°
N3C12C13H21119.3°120.0°
N3C12C14H21124.4°120.0°
N3C12C13O546.7°0.1°
N3C12C14C1565.0°65.0°
N3C12C14H2255.8°55.1°
N3C12C14H23174.3°175.0°
N3C12C13N4131.3°180.0°
H20N3C12C1398.3°25.0°
H20N3C12C1419.1°95.0°
H20N3C12H21142.9°145.0°
C13C12C14H21120.8°120.0°
C12C13O5N4177.9°180.0°
C13C12C14C15179.7°175.0°
C13C12C14H2259.0°64.9°
C13C12C14H2359.5°55.0°
C12C13N4C21179.3°180.0°
C12C13N4H350.7°0.0°
C13C12N3C881.7°155.0°
C14C12C13O573.5°120.0°
C12C14C15H22120.7°120.0°
C12C14C15H23120.7°120.0°
C12C14H22H23117.7°120.0°
C12C14C15C16169.8°175.0°
C12C14C15C2047.5°65.0°
C12C14C15H2472.5°55.0°
C14C12N3C8160.8°85.0°
C14C12C13N4108.5°60.0°
H21C12C13O5166.0°120.0°
H21C12C14C1559.5°55.0°
H21C12C14H22179.8°175.1°
H21C12C14H2361.3°65.0°
H21C12N3C837.1°35.0°
H21C12C13N412.0°60.0°
O5C13N4C211.4°0.0°
O5C13N4H35178.6°179.9°
C15C14H22H23117.7°120.0°
C14C15C16C20123.4°120.0°
C14C15C16H24117.6°120.0°
C14C15C20H24120.1°120.0°
C14C15C16C17176.0°180.0°
C14C15C16H2563.3°60.0°
C14C15C16H2655.3°60.0°
C14C15C20C19177.2°180.0°
C14C15C20H3356.9°60.0°
C14C15C20H3462.5°60.0°
H22C14C15C1669.5°55.0°
H22C14C15C20168.3°174.9°
H22C14C15H2448.2°65.0°
H23C14C15C1649.1°65.0°
H23C14C15C2073.2°55.0°
H23C14C15H24166.7°175.0°
C16C15C20H24119.0°120.1°
C15C16C17H25120.7°120.0°
C15C16C17H26120.7°120.0°
C15C16H25H26117.8°120.1°
C15C16C17C1847.8°60.0°
C15C16C17H2772.7°60.0°
C15C16C17H28168.3°180.0°
C16C15C20C1956.2°60.1°
C16C15C20H3364.1°60.0°
C16C15C20H34176.5°180.0°
C20C15C16C1752.6°60.0°
C20C15C16H25173.3°180.0°
C20C15C16H2668.1°60.0°
C15C20C19C1855.7°60.1°
C15C20C19H33120.3°120.0°
C15C20C19H34120.3°119.9°
C15C20C19H3164.7°60.0°
C15C20C19H32176.1°179.9°
C15C20H33H34119.1°119.9°
H24C15C16C1766.3°60.0°
H24C15C16H2554.3°59.9°
H24C15C16H26172.9°180.0°
H24C15C20C1962.7°60.0°
H24C15C20H33176.9°180.0°
H24C15C20H3457.6°60.0°
C17C16H25H26117.8°120.0°
C16C17C18H27120.5°120.0°
C16C17C18H28120.5°120.1°
C16C17H27H28118.5°120.0°
C16C17C18C1946.2°60.0°
C16C17C18H29166.9°180.0°
C16C17C18H3074.4°60.0°
H25C16C17C18168.5°180.0°
H25C16C17H2748.0°60.0°
H25C16C17H2871.0°60.0°
H26C16C17C1872.9°60.1°
H26C16C17H27166.6°179.9°
H26C16C17H2847.6°60.0°
C18C17H27H28118.4°120.0°
C17C18C19H29120.6°120.0°
C17C18C19H30120.6°120.0°
C17C18H29H30118.1°120.0°
C17C18C19C2050.8°60.0°
C17C18C19H3169.6°60.1°
C17C18C19H32171.2°180.0°
H27C17C18C1974.3°60.0°
H27C17C18H2946.3°60.0°
H27C17C18H30165.1°180.0°
H28C17C18C19166.7°180.0°
H28C17C18H2972.6°59.9°
H28C17C18H3046.1°60.1°
C19C18H29H30118.0°120.0°
C18C19C20H31120.4°120.1°
C18C19C20H32120.4°120.0°
C18C19H31H32118.8°120.0°
C18C19C20H3364.6°60.0°
C18C19C20H34176.0°180.0°
H29C18C19C20171.4°179.9°
H29C18C19H3151.0°60.0°
H29C18C19H3268.2°60.0°
H30C18C19C2069.9°60.0°
H30C18C19H31169.7°180.0°
H30C18C19H3250.5°60.0°
C20C19H31H32118.9°120.0°
C19C20H33H34119.1°120.1°
H31C19C20H33175.0°180.0°
H31C19C20H3455.6°59.9°
H32C19C20H3355.8°60.0°
H32C19C20H3463.6°60.0°
C21N4H35C13180.0°180.0°
N4C21C22C26122.1°120.0°
N4C21C22H36118.3°120.0°
N4C21C26H36117.3°120.0°
N4C21C22C2384.6°65.0°
N4C21C22H3735.6°55.0°
N4C21C22H38155.3°175.0°
N4C21C26O6161.6°0.0°
N4C21C26H4318.4°180.0°
H35N4C21C2241.4°25.0°
H35N4C21C2684.0°95.0°
H35N4C21H36159.2°145.0°
C22C21C26H36119.7°120.0°
C21C22C23H37120.1°120.0°
C21C22C23H38120.1°120.1°
C21C22H37H38119.6°120.1°
C21C22C23N5163.1°95.0°
C21C22C23C2417.9°85.3°
C22C21C26O638.6°120.0°
C22C21C26H43141.4°59.9°
C22C21N4C13138.6°155.0°
C26C21C22C23153.3°175.0°
C26C21C22H3786.5°65.0°
C26C21C22H3833.2°55.0°
C21C26O6H43180.0°180.0°
C26C21N4C1396.0°85.0°
H36C21C22C2333.7°55.0°
H36C21C22H37153.8°175.0°
H36C21C22H3886.4°65.0°
H36C21C26O681.1°120.0°
H36C21C26H4398.9°60.0°
H36C21N4C1320.8°35.0°
C23C22H37H38119.6°119.9°
C22C23N5C24179.2°179.8°
C22C23N5C25179.5°180.0°
C22C23N5H390.5°0.1°
C22C23C24N6179.5°180.0°
C22C23C24H400.4°0.0°
H37C22C23N543.0°25.0°
H37C22C23C24138.0°154.7°
H38C22C23N576.8°144.9°
H38C22C23C24102.2°34.8°
C23N5C25H39180.0°179.9°
N5C23C24N60.4°0.3°
N5C23C24H40179.6°179.7°
C23N5C25N60.2°0.2°
C23N5C25H41179.8°180.0°
C24C23N5C250.3°0.3°
C24C23N5H39179.6°179.9°
C23C24N6H40180.0°180.0°
C23C24N6C250.3°0.2°
C23C24N6H42179.7°180.0°
N5C25N6C240.1°0.0°
N5C25N6H41180.0°179.8°
N5C25N6H42179.9°179.8°
H39N5C25N6179.8°180.0°
H39N5C25H410.2°0.1°
C24N6C25H42180.0°179.8°
C24N6C25H41180.0°179.8°
H40C24N6C25179.7°179.8°
H40C24N6H420.3°0.0°
H41C25N6H420.1°0.0°

246704

PDB entries from 2025-12-24

PDB statisticsPDBj update infoContact PDBjnumon