PRD_000799
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
OXT | C | doub | 1.21Å | 1.25Å | |
O | C | sing | 1.34Å | 1.24Å | |
C | CA | sing | 1.51Å | 1.55Å | |
CA | N | sing | 1.46Å | 1.50Å | |
N | CAR | sing | 1.35Å | 1.33Å | |
N | HN | sing | 0.97Å | 1.00Å | |
O | HO | sing | 0.97Å | 0.95Å | |
CB | CA | sing | 1.53Å | 1.55Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CG | CB | sing | 1.53Å | 1.50Å | |
CB | HB | sing | 1.09Å | 1.10Å | |
CB | HBA | sing | 1.09Å | 1.10Å | |
CE | SD | sing | 1.81Å | 1.76Å | |
SD | CG | sing | 1.81Å | 1.85Å | |
CE | HE | sing | 1.09Å | 1.10Å | |
CE | HEA | sing | 1.09Å | 1.10Å | |
CE | HEB | sing | 1.09Å | 1.10Å | |
CG | HG | sing | 1.09Å | 1.10Å | |
CG | HGA | sing | 1.09Å | 1.10Å | |
CAO | CAB | sing | 1.51Å | 1.53Å | |
CAB | HAB | sing | 1.09Å | 1.10Å | |
CAB | HABA | sing | 1.09Å | 1.10Å | |
CAB | HABB | sing | 1.09Å | 1.10Å | |
CAO | OAC | doub | 1.21Å | 1.24Å | |
CAP | OAD | sing | 1.34Å | 1.25Å | |
OAD | HOAD | sing | 0.97Å | 0.95Å | |
OAF | CAR | doub | 1.21Å | 1.24Å | |
CAP | OAG | doub | 1.21Å | 1.28Å | |
CAK | CAT | sing | 1.53Å | 1.53Å | |
CAK | CAP | sing | 1.51Å | 1.55Å | |
CAK | HAK | sing | 1.09Å | 1.10Å | |
CAK | HAKA | sing | 1.09Å | 1.10Å | |
CAT | NAL | sing | 1.46Å | 1.49Å | |
NAL | CAO | sing | 1.35Å | 1.35Å | |
NAL | HNAL | sing | 0.97Å | 1.00Å | |
CAR | CAT | sing | 1.51Å | 1.53Å | |
CAT | HAT | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
OXT | C | O | 125.5° | 120.0° |
OXT | C | CA | 116.9° | 120.0° |
O | C | CA | 117.6° | 120.0° |
C | O | HO | 109.5° | 117.0° |
C | CA | N | 112.3° | 109.4° |
C | CA | CB | 109.0° | 109.5° |
C | CA | HA | 106.7° | 109.4° |
CA | N | CAR | 119.3° | 120.0° |
CA | N | HN | 120.4° | 120.0° |
N | CA | CB | 105.3° | 109.5° |
N | CA | HA | 110.3° | 109.5° |
CAR | N | HN | 120.4° | 120.0° |
N | CAR | OAF | 121.1° | 120.0° |
N | CAR | CAT | 116.8° | 120.0° |
CB | CA | HA | 113.5° | 109.5° |
CA | CB | CG | 109.0° | 109.4° |
CA | CB | HB | 109.7° | 109.5° |
CA | CB | HBA | 109.6° | 109.5° |
CG | CB | HB | 109.6° | 109.5° |
CG | CB | HBA | 109.6° | 109.5° |
CB | CG | SD | 108.2° | 109.5° |
CB | CG | HG | 109.9° | 109.5° |
CB | CG | HGA | 109.9° | 109.4° |
HB | CB | HBA | 109.3° | 109.5° |
CE | SD | CG | 103.5° | 103.0° |
SD | CE | HE | 109.5° | 109.5° |
SD | CE | HEA | 109.5° | 109.5° |
SD | CE | HEB | 109.5° | 109.5° |
SD | CG | HG | 109.9° | 109.5° |
SD | CG | HGA | 109.9° | 109.4° |
HE | CE | HEA | 109.4° | 109.4° |
HE | CE | HEB | 109.5° | 109.5° |
HEA | CE | HEB | 109.5° | 109.4° |
HG | CG | HGA | 109.0° | 109.5° |
CAO | CAB | HAB | 109.5° | 109.4° |
CAO | CAB | HABA | 109.5° | 109.5° |
CAO | CAB | HABB | 109.5° | 109.5° |
CAB | CAO | OAC | 119.3° | 120.0° |
CAB | CAO | NAL | 115.5° | 120.0° |
HAB | CAB | HABA | 109.5° | 109.5° |
HAB | CAB | HABB | 109.5° | 109.4° |
HABA | CAB | HABB | 109.5° | 109.5° |
OAC | CAO | NAL | 124.2° | 120.0° |
CAP | OAD | HOAD | 109.5° | 117.0° |
OAD | CAP | OAG | 126.7° | 120.0° |
OAD | CAP | CAK | 115.8° | 120.0° |
OAF | CAR | CAT | 121.8° | 120.0° |
OAG | CAP | CAK | 117.5° | 120.0° |
CAT | CAK | CAP | 110.6° | 109.5° |
CAT | CAK | HAK | 109.1° | 109.5° |
CAT | CAK | HAKA | 109.1° | 109.5° |
CAK | CAT | NAL | 113.4° | 109.5° |
CAK | CAT | CAR | 105.4° | 109.4° |
CAK | CAT | HAT | 109.5° | 109.4° |
CAP | CAK | HAK | 109.1° | 109.4° |
CAP | CAK | HAKA | 109.1° | 109.4° |
HAK | CAK | HAKA | 109.9° | 109.5° |
CAT | NAL | CAO | 121.6° | 120.0° |
CAT | NAL | HNAL | 119.1° | 120.0° |
NAL | CAT | CAR | 108.9° | 109.5° |
NAL | CAT | HAT | 106.0° | 109.5° |
CAO | NAL | HNAL | 119.2° | 120.0° |
CAR | CAT | HAT | 113.9° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
OXT | C | O | CA | 177.9° | 179.8° |
OXT | C | CA | N | 145.8° | 0.2° |
OXT | C | O | HO | 0.0° | 0.2° |
OXT | C | CA | CB | 98.0° | 120.2° |
OXT | C | CA | HA | 24.9° | 119.8° |
O | C | CA | N | 32.3° | 180.0° |
O | C | CA | CB | 83.9° | 60.0° |
O | C | CA | HA | 153.2° | 60.0° |
C | CA | N | CB | 118.4° | 120.0° |
C | CA | N | HA | 118.8° | 120.0° |
C | CA | N | CAR | 63.3° | 85.0° |
C | CA | N | HN | 116.6° | 95.0° |
CA | C | O | HO | 177.9° | 180.0° |
C | CA | CB | HA | 118.7° | 120.0° |
C | CA | CB | CG | 55.7° | 175.0° |
C | CA | CB | HB | 175.7° | 65.0° |
C | CA | CB | HBA | 64.3° | 55.0° |
CA | N | CAR | HN | 180.0° | 180.0° |
N | CA | CB | HA | 120.7° | 120.1° |
N | CA | CB | CG | 176.3° | 65.0° |
N | CA | CB | HB | 63.7° | 55.0° |
N | CA | CB | HBA | 56.3° | 175.0° |
CA | N | CAR | OAF | 0.7° | 0.0° |
CA | N | CAR | CAT | 173.0° | 180.0° |
CAR | N | CA | CB | 178.3° | 155.0° |
CAR | N | CA | HA | 55.5° | 35.0° |
N | CAR | OAF | CAT | 173.4° | 180.0° |
N | CAR | CAT | CAK | 76.6° | 60.0° |
N | CAR | CAT | NAL | 161.5° | 180.0° |
N | CAR | CAT | HAT | 43.5° | 60.0° |
HN | N | CA | CB | 1.8° | 25.0° |
HN | N | CA | HA | 124.6° | 145.0° |
HN | N | CAR | OAF | 179.2° | 180.0° |
HN | N | CAR | CAT | 7.0° | 0.0° |
CA | CB | CG | HB | 120.0° | 120.0° |
CA | CB | CG | HBA | 120.0° | 120.0° |
CA | CB | HB | HBA | 120.2° | 120.0° |
CA | CB | CG | SD | 176.6° | 180.0° |
CA | CB | CG | HG | 56.6° | 60.0° |
CA | CB | CG | HGA | 63.4° | 60.0° |
HA | CA | CB | CG | 63.0° | 55.0° |
HA | CA | CB | HB | 57.0° | 175.0° |
HA | CA | CB | HBA | 177.0° | 65.0° |
CG | CB | HB | HBA | 120.2° | 120.0° |
CB | CG | SD | CE | 77.5° | 180.0° |
CB | CG | SD | HG | 120.0° | 120.0° |
CB | CG | SD | HGA | 120.0° | 119.9° |
CB | CG | HG | HGA | 120.5° | 120.0° |
HB | CB | CG | SD | 63.4° | 60.0° |
HB | CB | CG | HG | 176.6° | NaN° |
HB | CB | CG | HGA | 56.7° | 60.0° |
HBA | CB | CG | SD | 56.6° | 60.0° |
HBA | CB | CG | HG | 63.4° | 60.0° |
HBA | CB | CG | HGA | 176.6° | 180.0° |
SD | CE | HE | HEA | 120.0° | 120.0° |
SD | CE | HE | HEB | 120.0° | 120.1° |
SD | CE | HEA | HEB | 120.0° | 120.0° |
CE | SD | CG | HG | 42.4° | 60.0° |
CE | SD | CG | HGA | 162.5° | 60.0° |
CG | SD | CE | HE | 180.0° | 179.9° |
CG | SD | CE | HEA | 60.0° | 60.0° |
CG | SD | CE | HEB | 60.0° | 60.0° |
SD | CG | HG | HGA | 120.5° | 120.0° |
HE | CE | HEA | HEB | 120.0° | 120.0° |
CAO | CAB | HAB | HABA | 120.0° | 120.0° |
CAO | CAB | HAB | HABB | 120.0° | 120.0° |
CAO | CAB | HABA | HABB | 120.0° | 120.1° |
CAB | CAO | OAC | NAL | 168.1° | 180.0° |
CAB | CAO | NAL | CAT | 177.5° | 175.1° |
CAB | CAO | NAL | HNAL | 2.5° | 5.0° |
HAB | CAB | HABA | HABB | 120.0° | 120.0° |
HAB | CAB | CAO | OAC | 0.0° | 120.0° |
HAB | CAB | CAO | NAL | 169.1° | 60.0° |
HABA | CAB | CAO | OAC | 120.0° | 0.0° |
HABA | CAB | CAO | NAL | 71.0° | 180.0° |
HABB | CAB | CAO | OAC | 120.0° | 120.1° |
HABB | CAB | CAO | NAL | 49.1° | 59.9° |
OAC | CAO | NAL | CAT | 9.0° | 4.9° |
OAC | CAO | NAL | HNAL | 171.0° | 175.0° |
OAD | CAP | OAG | CAK | 179.6° | 180.0° |
OAD | CAP | CAK | CAT | 81.7° | 175.5° |
OAD | CAP | CAK | HAK | 158.3° | 55.5° |
OAD | CAP | CAK | HAKA | 38.3° | 64.5° |
HOAD | OAD | CAP | OAG | 0.0° | 0.0° |
HOAD | OAD | CAP | CAK | 179.6° | 180.0° |
OAF | CAR | CAT | CAK | 109.7° | 120.0° |
OAF | CAR | CAT | NAL | 12.2° | 0.0° |
OAF | CAR | CAT | HAT | 130.3° | 120.0° |
OAG | CAP | CAK | CAT | 98.7° | 4.5° |
OAG | CAP | CAK | HAK | 21.3° | 124.5° |
OAG | CAP | CAK | HAKA | 141.3° | 115.5° |
CAT | CAK | CAP | HAK | 120.0° | 120.0° |
CAT | CAK | CAP | HAKA | 120.0° | 120.0° |
CAT | CAK | HAK | HAKA | 119.6° | 120.1° |
CAK | CAT | NAL | CAR | 116.9° | 120.0° |
CAK | CAT | NAL | HAT | 120.1° | 120.0° |
CAK | CAT | NAL | CAO | 88.9° | 153.3° |
CAK | CAT | NAL | HNAL | 91.1° | 26.8° |
CAK | CAT | CAR | HAT | 120.0° | 120.0° |
CAP | CAK | HAK | HAKA | 119.5° | 120.0° |
CAP | CAK | CAT | NAL | 67.1° | 65.6° |
CAP | CAK | CAT | CAR | 173.9° | 174.4° |
CAP | CAK | CAT | HAT | 51.1° | 54.4° |
HAK | CAK | CAT | NAL | 52.9° | 174.5° |
HAK | CAK | CAT | CAR | 66.1° | 54.4° |
HAK | CAK | CAT | HAT | 171.1° | 65.6° |
HAKA | CAK | CAT | NAL | 172.9° | 54.4° |
HAKA | CAK | CAT | CAR | 54.0° | 65.6° |
HAKA | CAK | CAT | HAT | 68.9° | 174.4° |
CAT | NAL | CAO | HNAL | 180.0° | 179.9° |
NAL | CAT | CAR | HAT | 118.1° | 120.0° |
CAO | NAL | CAT | CAR | 154.2° | 86.8° |
CAO | NAL | CAT | HAT | 31.2° | 33.3° |
HNAL | NAL | CAT | CAR | 25.8° | 93.2° |
HNAL | NAL | CAT | HAT | 148.8° | 146.8° |