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PRD_000618

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CCAsing1.53Å1.54Å
NC8sing1.35Å1.38Å
NHNsing0.97Å1.00Å
OCsing1.43Å1.28Å
C1N2sing1.47Å1.48Å
C1H1sing1.09Å1.10Å
N1N2sing1.37Å1.41Å
N1C4sing1.47Å1.49Å
C2C1sing1.55Å1.53Å
C2C3sing1.55Å1.56Å
C2H2sing1.09Å1.10Å
C2H2Asing1.09Å1.10Å
N2C7sing1.35Å1.39Å
O2C8doub1.21Å1.25Å
C3N1sing1.48Å1.47Å
C3H3sing1.09Å1.10Å
C3H3Asing1.09Å1.10Å
N3C6sing1.47Å1.50Å
N3HN3sing1.01Å1.00Å
N3HN3Asing1.01Å1.00Å
C4C5sing1.53Å1.55Å
C4H4sing1.09Å1.10Å
C4H4Asing1.09Å1.10Å
C5C6sing1.52Å1.51Å
C5H5sing1.09Å1.10Å
C5H5Asing1.09Å1.10Å
C6C9sing1.53Å1.55Å
C7O1doub1.21Å1.22Å
C7C6sing1.50Å1.55Å
C8C1sing1.51Å1.52Å
C9C10sing1.51Å1.53Å
C9H9sing1.09Å1.10Å
C9H9Asing1.09Å1.10Å
CANsing1.47Å1.49Å
CACBsing1.53Å1.55Å
CAHAsing1.09Å1.10Å
CBCGsing1.53Å1.49Å
CBHBsing1.09Å1.10Å
CBHBAsing1.09Å1.10Å
CDNEsing1.47Å1.43Å
CDHDsing1.09Å1.10Å
CDHDAsing1.09Å1.10Å
NECZsing1.38Å1.30Å
NEHNEsing0.97Å1.00Å
CGCDsing1.53Å1.44Å
CGHGsing1.09Å1.10Å
CGHGAsing1.09Å1.10Å
CZNH1doub1.30Å1.35Å
CZNH2sing1.37Å1.34Å
C10C11doub1.38Å1.42ÅAromatic
C10C15sing1.38Å1.41ÅAromatic
C11C12sing1.38Å1.41ÅAromatic
C11H11sing1.08Å1.08Å
C12C13doub1.38Å1.39ÅAromatic
C12H12sing1.08Å1.08Å
C13H13sing1.08Å1.08Å
C14C13sing1.38Å1.39ÅAromatic
C14H14sing1.08Å1.08Å
C15C14doub1.38Å1.41ÅAromatic
C15H15sing1.08Å1.08Å
C1XC6Xsing1.38Å1.40ÅAromatic
C1XC7Xsing1.51Å1.57Å
N1XC9Xsing1.35Å1.46Å
N1XHN1Xsing0.97Å1.00Å
C2XC1Xdoub1.38Å1.41ÅAromatic
C2XH2Xsing1.08Å1.08Å
C3XC2Xsing1.38Å1.41ÅAromatic
C3XC4Xdoub1.38Å1.41ÅAromatic
C3XH3Xsing1.08Å1.08Å
C4XC5Xsing1.38Å1.42ÅAromatic
C4XH4Xsing1.08Å1.08Å
C5XC6Xdoub1.38Å1.41ÅAromatic
C5XH5Xsing1.08Å1.08Å
C6XH6Xsing1.08Å1.08Å
C7XC8Xsing1.53Å1.58Å
C7XH7Xsing1.09Å1.10Å
C7XH7XAsing1.09Å1.10Å
C8XN1Xsing1.46Å1.49Å
C8XH8Xsing1.09Å1.10Å
C8XH8XAsing1.09Å1.10Å
C9XCsing1.51Å1.53Å
C9XO1Xdoub1.21Å1.19Å
NH1HNH1sing0.97Å1.00Å
NH2HNH2sing0.97Å1.00Å
NH2HNHAsing0.97Å1.00Å
CH41sing1.09Å1.10Å
OH42sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CACO124.5°109.5°
CCAN108.2°109.5°
CCACB106.6°109.5°
CCAHA113.5°109.5°
CACC9X112.0°109.5°
CACH4195.4°109.4°
C8NHN118.0°120.1°
NC8O2119.5°120.0°
NC8C1126.1°120.0°
C8NCA124.0°120.0°
HNNCA118.0°119.9°
OCC9X111.3°109.5°
OCH4196.5°109.4°
COH42109.5°114.0°
N2C1H1116.5°110.3°
C1N2N1112.2°109.5°
N2C1C2101.7°105.5°
C1N2C7120.7°125.6°
N2C1C8112.8°110.2°
H1C1C2109.7°110.2°
H1C1C897.9°110.2°
N2N1C4109.9°109.6°
N1N2C7125.7°124.9°
N2N1C3103.8°106.9°
C4N1C3119.7°110.7°
N1C4C5113.1°108.9°
N1C4H4108.3°109.6°
N1C4H4A108.3°109.6°
C1C2C3106.0°101.2°
C1C2H2110.6°111.1°
C1C2H2A110.7°111.1°
C2C1C8119.1°110.3°
C3C2H2110.6°111.0°
C3C2H2A110.7°111.1°
C2C3N1103.1°101.6°
C2C3H3111.6°111.0°
C2C3H3A111.6°111.1°
H2C2H2A108.3°111.0°
N2C7O1120.9°119.1°
N2C7C6121.4°121.8°
O2C8C1114.3°120.0°
N1C3H3111.6°111.0°
N1C3H3A111.7°111.0°
H3C3H3A107.2°110.9°
C6N3HN3109.5°111.0°
C6N3HN3A109.5°111.0°
N3C6C5111.4°109.1°
N3C6C999.9°109.1°
N3C6C7104.3°109.0°
HN3N3HN3A109.5°111.0°
C5C4H4108.3°109.6°
C5C4H4A108.3°109.5°
C4C5C6114.2°110.8°
C4C5H5107.9°109.2°
C4C5H5A107.9°109.2°
H4C4H4A110.6°109.7°
C6C5H5107.9°109.2°
C6C5H5A107.9°109.2°
C5C6C9114.7°109.0°
C5C6C7111.3°111.7°
H5C5H5A111.0°109.2°
C9C6C7114.1°108.9°
C6C9C10113.2°109.5°
C6C9H9108.2°109.4°
C6C9H9A108.2°109.5°
O1C7C6117.4°119.1°
C10C9H9108.2°109.4°
C10C9H9A108.2°109.5°
C9C10C11120.9°120.0°
C9C10C15122.6°119.9°
H9C9H9A110.7°109.5°
NCACB113.0°109.5°
NCAHA107.1°109.5°
CBCAHA108.7°109.4°
CACBCG109.3°109.5°
CACBHB109.5°109.5°
CACBHBA109.5°109.5°
CGCBHB109.6°109.4°
CGCBHBA109.5°109.5°
CBCGCD117.6°109.5°
CBCGHG106.8°109.4°
CBCGHGA106.8°109.5°
HBCBHBA109.4°109.5°
NECDHD108.1°109.5°
NECDHDA108.1°109.5°
CDNECZ128.1°120.0°
CDNEHNE115.9°120.0°
NECDCG113.8°109.5°
HDCDHDA110.8°109.5°
HDCDCG108.1°109.5°
HDACDCG108.1°109.5°
CZNEHNE116.0°120.0°
NECZNH1118.4°120.0°
NECZNH2123.0°120.0°
CDCGHG106.9°109.4°
CDCGHGA106.8°109.5°
HGCGHGA112.0°109.4°
NH1CZNH2118.4°120.0°
CZNH1HNH1112.0°120.0°
CZNH2HNH2120.0°120.0°
CZNH2HNHA120.0°120.0°
C11C10C15116.5°120.0°
C10C11C12120.5°120.0°
C10C11H11119.8°120.0°
C10C15C14121.8°120.0°
C10C15H15119.1°120.0°
C12C11H11119.7°120.0°
C11C12C13122.2°120.0°
C11C12H12118.9°119.9°
C13C12H12118.9°120.1°
C12C13H13121.2°120.0°
C12C13C14117.7°120.0°
H13C13C14121.1°120.0°
C13C14H14119.5°120.0°
C13C14C15120.9°120.0°
H14C14C15119.6°120.0°
C14C15H15119.1°120.0°
C6XC1XC7X117.9°120.0°
C6XC1XC2X122.0°120.1°
C1XC6XC5X119.5°119.9°
C1XC6XH6X120.2°120.0°
C7XC1XC2X119.9°119.9°
C1XC7XC8X102.8°109.5°
C1XC7XH7X111.7°109.5°
C1XC7XH7XA111.7°109.5°
C9XN1XHN1X124.1°120.0°
C9XN1XC8X111.8°120.0°
N1XC9XC110.4°120.0°
N1XC9XO1X128.4°120.0°
HN1XN1XC8X124.1°120.0°
C1XC2XH2X120.9°120.1°
C1XC2XC3X118.2°120.0°
H2XC2XC3X120.9°120.0°
C2XC3XC4X120.8°120.0°
C2XC3XH3X119.6°120.0°
C4XC3XH3X119.6°120.0°
C3XC4XC5X119.9°120.0°
C3XC4XH4X120.1°120.0°
C5XC4XH4X120.1°120.0°
C4XC5XC6X119.5°120.1°
C4XC5XH5X120.3°120.0°
C6XC5XH5X120.2°119.9°
C5XC6XH6X120.3°120.0°
C8XC7XH7X111.8°109.4°
C8XC7XH7XA111.8°109.4°
C7XC8XN1X108.6°109.5°
C7XC8XH8X109.8°109.4°
C7XC8XH8XA109.7°109.4°
H7XC7XH7XA107.1°109.5°
N1XC8XH8X109.7°109.5°
N1XC8XH8XA109.8°109.5°
H8XC8XH8XA109.1°109.5°
CC9XO1X121.2°120.0°
C9XCH41114.8°109.5°
HNH2NH2HNHA120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CCANC8115.3°155.0°
CCANHN64.7°25.0°
CACOC9X139.0°120.1°
CACOH41101.2°119.9°
CCANCB117.8°120.0°
CCANHA122.6°120.0°
CCACBHA122.6°120.0°
CCACBCG152.8°175.0°
CCACBHB87.2°65.1°
CCACBHBA32.8°55.0°
CACC9XN1X99.3°65.0°
CACC9XH41107.4°120.0°
CACC9XO1X82.8°114.9°
CACOH42180.0°60.0°
C8NHNCA180.0°179.9°
NC8C1N2149.0°180.0°
NC8C1H125.9°58.1°
NC8C1C292.0°63.9°
NC8O2C1177.6°180.0°
C8NCACB127.0°85.0°
C8NCAHA7.3°35.0°
HNNC8O2178.1°180.0°
HNNC8C14.6°0.0°
HNNCACB53.1°95.0°
HNNCAHA172.7°145.1°
OCCAN170.6°65.0°
OCCACB48.8°55.0°
OCCAHA70.8°175.0°
OCC9XN1X45.0°175.0°
OCC9XH41108.3°120.0°
OCC9XO1X132.8°5.1°
N2C1H1C2114.8°116.0°
N2C1H1C8120.4°122.0°
C1N2N1C7166.6°179.3°
C1N2N1C4163.3°148.3°
N2C1C2C8124.6°119.0°
N2C1C2C36.6°19.0°
N2C1C2H2113.4°98.9°
N2C1C2H2A126.6°137.0°
N2C1C8O228.4°0.0°
C1N2N1C334.2°28.3°
C1N2C7O12.0°2.3°
C1N2C7C6174.9°177.7°
H1C1N2N1135.9°123.7°
H1C1C2C8111.5°122.0°
H1C1C2C3117.3°100.0°
H1C1C2H2122.7°142.1°
H1C1C2H2A2.7°18.0°
H1C1N2C756.7°55.6°
H1C1C8O2151.5°121.9°
N2N1C4C3119.8°117.7°
N1N2C1C216.7°4.7°
N2N1C3C235.7°39.5°
N2N1C3H3155.7°78.5°
N2N1C3H3A84.3°157.7°
N2N1C4C551.3°59.8°
N2N1C4H4171.3°179.6°
N2N1C4H4A68.7°60.0°
N1N2C7O1163.6°178.5°
N1N2C7C69.3°1.6°
N1N2C1C8112.0°114.4°
C4N1C3C2158.5°158.9°
C4N1N2C730.1°31.0°
C4N1C3H381.5°40.8°
C4N1C3H3A38.5°83.0°
N1C4C5H4120.0°119.8°
N1C4C5H4A120.0°119.8°
N1C4H4H4A118.5°120.3°
N1C4C5C655.2°61.8°
N1C4C5H564.8°58.5°
N1C4C5H5A175.2°177.9°
C1C2C3H2120.0°118.0°
C1C2C3H2A120.0°118.0°
C1C2H2H2A121.4°124.1°
C2C1N2C7175.9°174.6°
C2C1C8O290.6°116.1°
C1C2C3N126.1°34.3°
C1C2C3H3146.1°83.8°
C1C2C3H3A93.9°152.4°
C3C2H2H2A121.4°124.1°
C2C3N1H3120.0°118.0°
C2C3N1H3A120.0°118.1°
C2C3H3H3A122.6°124.0°
C3C2C1C8131.2°138.0°
H2C2C3N193.9°83.7°
H2C2C3H326.1°158.2°
H2C2C3H3A146.1°34.4°
H2C2C1C811.2°20.1°
H2AC2C3N1146.1°152.3°
H2AC2C3H393.9°34.3°
H2AC2C3H3A26.1°89.6°
H2AC2C1C8108.8°103.9°
C7N2N1C3159.2°151.1°
N2C7C6N3129.8°123.1°
N2C7C6C59.6°2.5°
N2C7C6C9122.2°118.0°
N2C7O1C6173.2°180.0°
C7N2C1C855.3°66.3°
O2C8NCA1.9°0.0°
N1C3H3H3A122.6°123.9°
C3N1C4C5171.1°177.5°
C3N1C4H468.9°62.7°
C3N1C4H4A51.1°57.7°
C6N3HN3HN3A120.0°123.9°
N3C6C5C4147.5°152.5°
N3C6C5C9112.6°119.0°
N3C6C5C7116.0°120.6°
N3C6C5H527.5°32.1°
N3C6C5H5A92.5°87.2°
N3C6C9C7110.7°118.9°
N3C6C7O143.4°57.0°
N3C6C9C10172.1°54.9°
N3C6C9H968.0°65.0°
N3C6C9H9A52.1°175.0°
HN3N3C6C5180.0°180.0°
HN3N3C6C958.4°61.0°
HN3N3C6C759.8°57.8°
HN3AN3C6C560.0°56.1°
HN3AN3C6C9178.4°175.0°
HN3AN3C6C760.2°66.1°
C5C4H4H4A118.5°120.3°
C4C5C6H5120.0°120.3°
C4C5C6H5A120.0°120.3°
C4C5H5H5A118.1°119.4°
C4C5C6C999.9°88.5°
C4C5C6C731.6°31.9°
H4C4C5C6175.2°178.4°
H4C4C5H555.2°61.3°
H4C4C5H5A64.8°58.1°
H4AC4C5C664.8°58.0°
H4AC4C5H5175.2°178.4°
H4AC4C5H5A55.2°62.3°
C6C5H5H5A118.0°119.4°
C5C6C9C7130.1°122.1°
C5C6C7O1163.6°177.5°
C5C6C9C1052.9°173.9°
C5C6C9H9172.8°54.0°
C5C6C9H9A67.1°66.0°
H5C5C6C9140.1°151.1°
H5C5C6C788.4°88.4°
H5AC5C6C920.1°31.8°
H5AC5C6C7151.6°152.3°
C9C6C7O164.6°62.0°
C6C9C10H9120.0°119.9°
C6C9C10H9A120.0°120.1°
C6C9H9H9A118.5°120.0°
C6C9C10C1188.0°89.9°
C6C9C10C1592.5°90.3°
C7C6C9C1077.3°64.0°
C7C6C9H942.7°176.1°
C7C6C9H9A162.8°56.1°
C1C8NCA175.4°180.0°
C10C9H9H9A118.4°120.0°
C9C10C11C15179.5°179.7°
C9C10C11C12178.2°180.0°
C9C10C11H111.8°0.0°
C9C10C15C14178.1°179.8°
C9C10C15H151.9°0.0°
H9C9C10C11152.0°30.0°
H9C9C10C1527.5°149.8°
H9AC9C10C1132.0°150.0°
H9AC9C10C15147.5°29.7°
NCACBHA118.7°119.9°
NCACBCG88.5°64.9°
NCACBHB31.5°55.0°
NCACBHBA151.5°175.0°
NCACC9X50.7°175.0°
NCACH4168.8°54.9°
CACBCGHB120.0°120.0°
CACBCGHBA120.0°120.0°
CACBHBHBA120.0°120.1°
CACBCGCD174.9°180.0°
CACBCGHG65.1°60.0°
CACBCGHGA54.9°59.9°
CBCACC9X172.5°65.0°
CBCACH4153.0°175.0°
HACACBCG30.2°55.0°
HACACBHB150.2°175.0°
HACACBHBA89.8°65.0°
HACACC9X68.0°54.9°
HACACH41172.5°65.1°
CGCBHBHBA120.1°119.9°
CBCGCDNE165.4°180.0°
CBCGCDHD45.4°60.0°
CBCGCDHDA74.6°60.0°
CBCGCDHG120.0°120.0°
CBCGCDHGA120.0°120.1°
CBCGHGHGA116.6°120.0°
HBCBCGCD54.9°60.0°
HBCBCGHG174.9°180.0°
HBCBCGHGA65.1°60.1°
HBACBCGCD65.1°60.0°
HBACBCGHG54.9°60.0°
HBACBCGHGA174.9°180.0°
NECDHDHDA118.2°120.1°
NECDHDCG123.5°120.0°
NECDHDACG123.5°120.0°
CDNECZHNE180.0°179.9°
NECDCGHG45.4°60.0°
NECDCGHGA74.6°60.0°
CDNECZNH11.1°0.0°
CDNECZNH2174.4°180.0°
HDCDHDACG118.3°120.0°
HDCDNECZ61.8°60.1°
HDCDNEHNE118.2°120.0°
HDCDCGHG74.6°60.0°
HDCDCGHGA165.4°180.0°
HDACDNECZ58.2°60.0°
HDACDNEHNE121.8°119.9°
HDACDCGHG165.4°180.0°
HDACDCGHGA45.5°60.1°
CZNECDCG178.2°180.0°
NECZNH1NH2175.8°180.0°
NECZNH1HNH1175.8°180.0°
NECZNH2HNH2175.6°0.0°
NECZNH2HNHA4.4°180.0°
HNENECDCG1.8°0.1°
HNENECZNH1178.9°179.9°
HNENECZNH25.5°0.1°
CDCGHGHGA116.7°120.0°
NH1CZNH2HNH20.0°180.0°
NH1CZNH2HNHA180.0°0.0°
NH2CZNH1HNH10.0°0.1°
CZNH2HNH2HNHA180.0°180.0°
C10C11C12H11180.0°180.0°
C10C11C12C132.2°0.0°
C10C11C12H12177.8°180.0°
C11C10C15C141.4°0.5°
C11C10C15H15178.6°179.8°
C15C10C11C122.2°0.2°
C15C10C11H11177.7°179.7°
C10C15C14C135.3°0.5°
C10C15C14H14174.7°179.7°
C10C15C14H15180.0°179.7°
C11C12C13H12180.0°180.0°
C11C12C13H13178.3°180.0°
C11C12C13C141.6°0.0°
H11C11C12C13177.8°180.0°
H11C11C12H122.2°0.0°
C12C13H13C14180.0°180.0°
C12C13C14H14174.7°179.9°
C12C13C14C155.3°0.2°
H12C12C13H131.7°0.0°
H12C12C13C14178.4°180.0°
H13C13C14H145.3°0.1°
H13C13C14C15174.7°179.8°
C13C14H14C15180.0°179.8°
C13C14C15H15174.7°179.8°
H14C14C15H155.3°0.1°
C6XC1XC7XC2X175.5°179.7°
C6XC1XC2XH2X176.0°180.0°
C6XC1XC2XC3X4.0°0.0°
C1XC6XC5XC4X0.2°0.1°
C1XC6XC5XH6X180.0°179.7°
C1XC6XC5XH5X179.8°180.0°
C6XC1XC7XC8X16.2°90.0°
C6XC1XC7XH7X103.9°150.0°
C6XC1XC7XH7XA136.2°30.0°
C7XC1XC2XH2X0.7°0.3°
C7XC1XC2XC3X179.3°179.7°
C7XC1XC6XC5X178.2°179.7°
C7XC1XC6XH6X1.8°0.0°
C1XC7XC8XH7X120.0°120.1°
C1XC7XC8XH7XA120.0°120.0°
C1XC7XH7XH7XA122.7°120.1°
C1XC7XC8XN1X65.3°180.0°
C1XC7XC8XH8X54.7°60.0°
C1XC7XC8XH8XA174.6°60.0°
C9XN1XHN1XC8X180.0°180.0°
C9XN1XC8XC7X94.7°180.0°
C9XN1XC8XH8X145.3°60.1°
C9XN1XC8XH8XA25.3°60.0°
N1XC9XCO1X177.9°179.9°
N1XC9XCH41153.3°55.1°
HN1XN1XC8XC7X85.3°0.0°
HN1XN1XC8XH8X34.7°120.0°
HN1XN1XC8XH8XA154.7°119.9°
HN1XN1XC9XC2.0°0.1°
HN1XN1XC9XO1X175.7°180.0°
C1XC2XH2XC3X180.0°179.9°
C1XC2XC3XC4X2.3°0.0°
C1XC2XC3XH3X177.7°179.9°
C2XC1XC6XC5X2.8°0.0°
C2XC1XC6XH6X177.2°179.7°
C2XC1XC7XC8X159.4°89.7°
C2XC1XC7XH7X80.6°30.3°
C2XC1XC7XH7XA39.4°150.3°
H2XC2XC3XC4X177.7°179.9°
H2XC2XC3XH3X2.3°0.0°
C2XC3XC4XH3X180.0°179.9°
C2XC3XC4XC5X0.5°0.1°
C2XC3XC4XH4X179.5°180.0°
C3XC4XC5XH4X180.0°179.9°
C3XC4XC5XC6X1.7°0.2°
C3XC4XC5XH5X178.3°180.0°
H3XC3XC4XC5X179.5°180.0°
H3XC3XC4XH4X0.5°0.1°
C4XC5XC6XH5X180.0°179.8°
C4XC5XC6XH6X179.8°179.8°
H4XC4XC5XC6X178.3°179.9°
H4XC4XC5XH5X1.7°0.1°
H5XC5XC6XH6X0.2°0.4°
C8XC7XH7XH7XA122.7°119.9°
C7XC8XN1XH8X120.0°120.0°
C7XC8XN1XH8XA120.0°119.9°
C7XC8XH8XH8XA120.3°119.9°
H7XC7XC8XN1X174.7°60.0°
H7XC7XC8XH8X65.3°60.1°
H7XC7XC8XH8XA54.6°180.0°
H7XAC7XC8XN1X54.6°60.0°
H7XAC7XC8XH8X174.7°180.0°
H7XAC7XC8XH8XA65.4°60.0°
N1XC8XH8XH8XA120.3°120.1°
C8XN1XC9XC178.0°180.0°
C8XN1XC9XO1X4.3°0.1°
C9XCOH4240.9°60.1°
O1XC9XCH4124.6°125.0°
H41COH4278.8°179.9°

224931

PDB entries from 2024-09-11

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