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PRD_000401

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C7sing1.35Å1.33Å
O1C16sing1.45Å1.41Å
C1C2doub1.38Å1.40ÅAromatic
C1C6sing1.38Å1.38ÅAromatic
C1H1sing1.08Å1.08Å
C2C3sing1.38Å1.38ÅAromatic
C2H2sing1.08Å1.08Å
C3C4doub1.38Å1.41ÅAromatic
C3H3sing1.08Å1.08Å
C4C5sing1.38Å1.40ÅAromatic
C4C16sing1.51Å1.52Å
C5C6doub1.38Å1.38ÅAromatic
C5H4sing1.08Å1.08Å
C6H5sing1.08Å1.08Å
C7O2doub1.22Å1.22Å
C7N1sing1.35Å1.36Å
N1C8sing1.46Å1.42Å
N1H6sing0.97Å1.00Å
C8C9sing1.53Å1.54Å
C8C17sing1.53Å1.55Å
C8H7sing1.09Å1.10Å
C9C10sing1.51Å1.49Å
C9H8sing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C10C11doub1.38Å1.41ÅAromatic
C10C15sing1.38Å1.38ÅAromatic
C11C12sing1.38Å1.38ÅAromatic
C11H10sing1.08Å1.08Å
C12C13doub1.38Å1.37ÅAromatic
C12H11sing1.08Å1.08Å
C13C14sing1.38Å1.37ÅAromatic
C13H12sing1.08Å1.08Å
C14C15doub1.38Å1.39ÅAromatic
C14H13sing1.08Å1.08Å
C15H14sing1.08Å1.08Å
C16H15sing1.09Å1.10Å
C16H16sing1.09Å1.10Å
C17O3sing1.43Å1.41Å
C17C18sing1.51Å1.55Å
C17H17sing1.09Å1.10Å
O3H18sing0.97Å0.95Å
C18O4doub1.21Å1.22Å
N2C19sing1.46Å1.47Å
N2H19sing0.97Å1.00Å
C19C20sing1.51Å1.51Å
C19C21sing1.53Å1.49Å
C19H20sing1.09Å1.10Å
C20O5doub1.21Å1.21Å
C21C22sing1.51Å1.51Å
C21H21sing1.09Å1.10Å
C21H22sing1.09Å1.10Å
C22C23doub1.38Å1.38ÅAromatic
C22C24sing1.38Å1.39ÅAromatic
C23C25sing1.38Å1.39ÅAromatic
C23H23sing1.08Å1.08Å
C24C26doub1.38Å1.39ÅAromatic
C24H24sing1.08Å1.08Å
C25C27doub1.38Å1.37ÅAromatic
C25H25sing1.08Å1.08Å
C26C27sing1.38Å1.39ÅAromatic
C26H26sing1.08Å1.08Å
C27H27sing1.08Å1.08Å
N3C28sing1.47Å1.47Å
N3H28sing0.97Å1.00Å
C28C29sing1.51Å1.52Å
C28C30sing1.53Å1.50Å
C28H29sing1.09Å1.10Å
C29O6doub1.21Å1.24Å
C30C31sing1.53Å1.51Å
C30H30sing1.09Å1.10Å
C30H31sing1.09Å1.10Å
C31C32sing1.51Å1.51Å
C31H32sing1.09Å1.10Å
C31H33sing1.09Å1.10Å
C32O7doub1.21Å1.26Å
C32O8sing1.34Å1.26Å
O8H34sing0.97Å0.95Å
N4C33sing1.47Å1.46Å
N4H35sing0.97Å1.00Å
C33C34sing1.51Å1.51Å
C33C35sing1.53Å1.53Å
C33H36sing1.09Å1.10Å
C34O9doub1.21Å1.23Å
C35C36sing1.53Å1.52Å
C35H37sing1.09Å1.10Å
C35H38sing1.09Å1.10Å
C36C37sing1.51Å1.51Å
C36H39sing1.09Å1.10Å
C36H40sing1.09Å1.10Å
C37O10doub1.21Å1.25Å
C37O11sing1.34Å1.25Å
O11H41sing0.97Å0.95Å
N5H42sing0.97Å1.00Å
N5H43sing0.97Å1.00Å
C18N2sing1.35Å1.33Å
C34N5sing1.35Å1.24Å
C20N3sing1.35Å1.35Å
C29N4sing1.35Å1.31Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C7O1C16120.1°117.0°
O1C7O2125.6°120.0°
O1C7N1110.6°120.1°
O1C16C4104.6°109.5°
O1C16H15110.7°109.5°
O1C16H16110.7°109.5°
C2C1C6119.4°120.0°
C2C1H1120.3°120.0°
C1C2C3122.1°120.0°
C1C2H2119.0°120.0°
C6C1H1120.3°120.0°
C1C6C5117.1°120.0°
C1C6H5121.4°120.0°
C3C2H2118.9°120.0°
C2C3C4120.2°120.0°
C2C3H3119.9°120.0°
C4C3H3119.9°120.0°
C3C4C5115.2°120.0°
C3C4C16122.7°120.0°
C5C4C16122.1°120.0°
C4C5C6125.9°120.0°
C4C5H4117.0°120.0°
C4C16H15110.7°109.5°
C4C16H16110.7°109.5°
C6C5H4117.0°120.0°
C5C6H5121.4°120.0°
O2C7N1123.8°120.0°
C7N1C8125.5°120.0°
C7N1H6117.2°120.0°
C8N1H6117.3°120.0°
N1C8C9109.3°109.5°
N1C8C17108.7°109.5°
N1C8H7110.5°109.5°
C9C8C17110.9°109.5°
C9C8H7108.7°109.5°
C8C9C10116.3°109.5°
C8C9H8107.7°109.5°
C8C9H9107.7°109.5°
C17C8H7108.7°109.4°
C8C17O3108.6°109.4°
C8C17C18108.2°109.5°
C8C17H17108.5°109.5°
C10C9H8107.8°109.5°
C10C9H9107.7°109.4°
C9C10C11121.5°119.9°
C9C10C15122.1°120.0°
H8C9H9109.5°109.5°
C11C10C15116.5°120.0°
C10C11C12120.6°120.0°
C10C11H10119.8°120.1°
C10C15C14121.3°120.0°
C10C15H14119.3°120.0°
C12C11H10119.7°120.0°
C11C12C13122.9°120.0°
C11C12H11118.6°120.0°
C13C12H11118.6°120.0°
C12C13C14116.4°120.0°
C12C13H12121.8°120.0°
C14C13H12121.8°120.0°
C13C14C15122.3°120.0°
C13C14H13118.8°120.0°
C15C14H13118.9°120.0°
C14C15H14119.4°120.1°
H15C16H16109.5°109.4°
O3C17C18112.6°109.4°
O3C17H17110.4°109.5°
C17O3H18109.5°114.1°
C18C17H17108.5°109.5°
C17C18O4117.7°120.0°
C17C18N2123.0°120.0°
O4C18N2118.3°120.0°
C19N2H19118.5°120.0°
N2C19C20110.7°109.5°
N2C19C21113.7°109.5°
N2C19H20106.0°109.4°
C19N2C18122.9°120.0°
H19N2C18118.6°120.0°
C20C19C21114.4°109.5°
C20C19H20105.4°109.5°
C19C20O5116.8°119.9°
C19C20N3118.5°120.0°
C21C19H20105.7°109.5°
C19C21C22119.4°109.5°
C19C21H21106.9°109.4°
C19C21H22107.0°109.5°
O5C20N3124.6°120.0°
C22C21H21107.0°109.5°
C22C21H22106.9°109.5°
C21C22C23120.7°120.0°
C21C22C24120.0°120.0°
H21C21H22109.4°109.5°
C23C22C24119.3°120.0°
C22C23C25121.3°120.0°
C22C23H23119.4°120.0°
C22C24C26119.6°120.0°
C22C24H24120.2°120.0°
C25C23H23119.4°120.0°
C23C25C27119.0°120.0°
C23C25H25120.5°120.0°
C26C24H24120.2°120.0°
C24C26C27120.2°120.0°
C24C26H26119.8°120.0°
C27C25H25120.5°120.0°
C25C27C26120.7°120.0°
C25C27H27119.6°120.0°
C27C26H26119.9°120.0°
C26C27H27119.7°120.0°
C28N3H28116.7°120.0°
N3C28C29111.5°109.5°
N3C28C30112.0°109.5°
N3C28H29107.3°109.5°
C28N3C20126.7°120.0°
H28N3C20116.7°120.0°
C29C28C30111.9°109.4°
C29C28H29106.7°109.5°
C28C29O6116.0°120.0°
C28C29N4118.9°120.0°
C30C28H29107.0°109.5°
C28C30C31120.7°109.4°
C28C30H30106.6°109.5°
C28C30H31106.6°109.5°
O6C29N4125.1°120.0°
C31C30H30106.6°109.5°
C31C30H31106.6°109.5°
C30C31C32115.0°109.5°
C30C31H32108.1°109.5°
C30C31H33108.0°109.5°
H30C30H31109.5°109.5°
C32C31H32108.1°109.5°
C32C31H33108.1°109.4°
C31C32O7115.0°120.0°
C31C32O8121.7°120.0°
H32C31H33109.5°109.5°
O7C32O8122.9°120.1°
C32O8H34109.5°116.9°
C33N4H35118.7°120.0°
N4C33C34112.4°109.5°
N4C33C35107.6°109.5°
N4C33H36108.4°109.4°
C33N4C29122.6°120.0°
H35N4C29118.7°120.0°
C34C33C35112.8°109.5°
C34C33H36107.8°109.5°
C33C34O9121.8°120.0°
C33C34N5121.1°120.0°
C35C33H36107.6°109.5°
C33C35C36111.3°109.5°
C33C35H37109.0°109.4°
C33C35H38109.0°109.4°
O9C34N5116.9°120.0°
C36C35H37109.0°109.5°
C36C35H38109.0°109.5°
C35C36C37114.7°109.5°
C35C36H39108.1°109.5°
C35C36H40108.1°109.5°
H37C35H38109.5°109.5°
C37C36H39108.2°109.5°
C37C36H40108.2°109.5°
C36C37O10116.6°120.0°
C36C37O11120.3°120.0°
H39C36H40109.5°109.5°
O10C37O11123.2°120.0°
C37O11H41109.5°117.0°
H42N5H43120.0°119.9°
H42N5C34120.0°120.0°
H43N5C34120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C7O1C16C4163.0°180.0°
O1C7O2N1177.2°180.0°
O1C7N1C8178.3°180.0°
O1C7N1H61.7°0.0°
C7O1C16H1543.8°60.0°
C7O1C16H1677.8°60.0°
O1C16C4C380.7°90.0°
O1C16C4C599.1°90.1°
O1C16C4H15119.2°120.0°
O1C16C4H16119.2°120.0°
C16O1C7O23.3°0.0°
C16O1C7N1179.2°180.0°
O1C16H15H16122.3°120.0°
C2C1C6H1180.0°179.6°
C1C2C3H2180.0°179.8°
C1C2C3C40.4°0.2°
C1C2C3H3179.6°179.9°
C2C1C6C50.0°0.0°
C2C1C6H5179.9°180.0°
C6C1C2C30.1°0.1°
C6C1C2H2179.9°179.9°
C1C6C5C40.0°0.0°
C1C6C5H5180.0°179.9°
C1C6C5H4180.0°180.0°
H1C1C2C3179.9°179.7°
H1C1C2H20.1°0.5°
H1C1C6C5180.0°179.7°
H1C1C6H50.1°0.4°
C2C3C4H3180.0°179.9°
C2C3C4C50.4°0.2°
C2C3C4C16179.8°179.9°
H2C2C3C4179.6°180.0°
H2C2C3H30.4°0.1°
C3C4C5C16179.8°179.9°
C3C4C5C60.2°0.1°
C3C4C5H4179.7°179.9°
C3C4C16H15160.0°30.0°
C3C4C16H1638.5°149.9°
H3C3C4C5179.6°179.9°
H3C3C4C160.2°0.0°
C4C5C6H4180.0°180.0°
C4C5C6H5180.0°180.0°
C5C4C16H1520.1°149.9°
C5C4C16H16141.7°30.0°
C16C4C5C6179.9°180.0°
C16C4C5H40.1°0.0°
C4C16H15H16122.3°120.0°
H4C5C6H50.0°0.1°
O2C7N1C84.1°0.0°
O2C7N1H6175.9°180.0°
C7N1C8H6180.0°180.0°
C7N1C8C9116.1°91.3°
C7N1C8C17122.7°148.7°
C7N1C8H73.5°28.7°
N1C8C9C17119.8°120.0°
N1C8C9H7120.8°120.0°
N1C8C17H7120.4°120.0°
N1C8C9C10179.7°65.0°
N1C8C9H858.7°55.0°
N1C8C9H959.3°175.0°
N1C8C17O347.1°58.4°
N1C8C17C1875.4°61.6°
N1C8C17H17167.1°178.4°
H6N1C8C963.8°88.7°
H6N1C8C1757.3°31.3°
H6N1C8H7176.5°151.3°
C9C8C17H7119.5°120.0°
C8C9C10H8121.0°120.0°
C8C9C10H9121.0°120.0°
C8C9H8H9116.9°120.0°
C8C9C10C11131.6°90.0°
C8C9C10C1547.0°90.2°
C9C8C17O373.1°61.6°
C9C8C17C18164.4°178.4°
C9C8C17H1746.9°58.3°
C17C8C9C1060.5°174.9°
C17C8C9H8178.5°65.0°
C17C8C9H960.5°55.0°
C8C17O3C18119.8°120.0°
C8C17O3H17118.8°120.0°
C8C17C18H17117.5°120.1°
C8C17O3H18180.0°60.0°
C8C17C18O478.8°120.9°
C8C17C18N289.4°59.2°
H7C8C9C1059.0°55.0°
H7C8C9H862.0°175.0°
H7C8C9H9179.9°65.0°
H7C8C17O3167.4°178.4°
H7C8C17C1845.0°58.4°
H7C8C17H1772.6°61.6°
C10C9H8H9116.9°120.0°
C9C10C11C15178.7°179.8°
C9C10C11C12179.6°180.0°
C9C10C11H100.4°0.0°
C9C10C15C14179.2°179.7°
C9C10C15H140.8°0.0°
H8C9C10C11107.4°30.0°
H8C9C10C1574.0°149.8°
H9C9C10C1110.6°150.0°
H9C9C10C15168.0°29.8°
C10C11C12H10180.0°180.0°
C10C11C12C130.4°0.0°
C10C11C12H11179.5°180.0°
C11C10C15C142.1°0.5°
C11C10C15H14177.9°179.8°
C15C10C11C121.7°0.2°
C15C10C11H10178.3°179.8°
C10C15C14C130.5°0.4°
C10C15C14H14180.0°179.8°
C10C15C14H13179.5°179.7°
C11C12C13H11180.0°180.0°
C11C12C13C142.1°0.0°
C11C12C13H12177.9°180.0°
H10C11C12C13179.6°180.0°
H10C11C12H110.5°0.0°
C12C13C14H12180.0°180.0°
C12C13C14C151.6°0.2°
C12C13C14H13178.4°180.0°
H11C12C13C14177.9°180.0°
H11C12C13H122.1°0.0°
C13C14C15H13180.0°179.9°
C13C14C15H14179.5°179.8°
H12C13C14C15178.4°179.8°
H12C13C14H131.6°0.1°
H13C14C15H140.5°0.0°
O3C17C18H17122.5°120.0°
O3C17C18O4161.2°1.0°
O3C17C18N230.6°179.1°
C18C17O3H1860.2°59.9°
C17C18O4N2168.8°179.9°
C17C18N2C19172.0°174.7°
C17C18N2H198.0°5.4°
H17C17O3H1861.2°180.0°
H17C17C18O438.8°119.0°
H17C17C18N2153.0°60.9°
O4C18N2C193.9°5.2°
O4C18N2H19176.1°174.7°
C19N2H19C18180.0°179.9°
N2C19C20C21130.1°120.1°
N2C19C20H20114.2°119.9°
N2C19C21H20115.9°119.9°
N2C19C20O54.9°0.1°
N2C19C21C2262.6°67.7°
N2C19C21H21176.0°52.3°
N2C19C21H2258.8°172.2°
N2C19C20N3171.5°180.0°
H19N2C19C2054.6°27.9°
H19N2C19C2175.8°92.2°
H19N2C19H20168.5°147.9°
C20C19C21H20115.5°120.0°
C19C20O5N3176.1°180.0°
C20C19C21C2266.0°172.2°
C20C19C21H2155.4°67.8°
C20C19C21H22172.6°52.2°
C19C20N3C28173.6°180.0°
C19C20N3H286.4°0.0°
C20C19N2C18125.4°152.2°
C21C19C20O5125.2°120.0°
C19C21C22H21121.4°120.0°
C19C21C22H22121.4°120.0°
C19C21H21H22115.5°120.0°
C19C21C22C2379.4°97.2°
C19C21C22C24100.8°83.0°
C21C19N2C18104.2°87.7°
C21C19C20N358.4°60.0°
H20C19C20O5119.1°120.0°
H20C19C21C22178.5°52.2°
H20C19C21H2160.1°172.2°
H20C19C21H2257.1°67.8°
H20C19N2C1811.6°32.2°
H20C19C20N357.3°60.0°
O5C20N3C282.4°0.0°
O5C20N3H28177.6°180.0°
C22C21H21H22115.5°120.0°
C21C22C23C24179.9°179.8°
C21C22C23C25179.9°180.0°
C21C22C23H230.1°0.1°
C21C22C24C26179.9°180.0°
C21C22C24H240.1°0.1°
H21C21C22C2342.1°22.8°
H21C21C22C24137.8°157.0°
H22C21C22C23159.2°142.8°
H22C21C22C2420.7°37.0°
C22C23C25H23180.0°179.9°
C23C22C24C260.1°0.2°
C23C22C24H24180.0°179.7°
C22C23C25C270.0°0.0°
C22C23C25H25180.0°179.9°
C24C22C23C250.0°0.3°
C24C22C23H23180.0°179.8°
C22C24C26H24180.0°179.9°
C22C24C26C270.0°0.0°
C22C24C26H26180.0°180.0°
C23C25C27H25180.0°180.0°
C23C25C27C260.1°0.2°
C23C25C27H27179.9°180.0°
H23C23C25C27180.0°179.9°
H23C23C25H250.0°0.0°
C24C26C27C250.0°0.3°
C24C26C27H26180.0°179.9°
C24C26C27H27180.0°180.0°
H24C24C26C27180.0°180.0°
H24C24C26H260.0°0.1°
C25C27C26H27180.0°179.7°
C25C27C26H26180.0°179.8°
H25C25C27C26180.0°179.8°
H25C25C27H270.1°0.0°
H26C26C27H270.1°0.0°
C28N3H28C20180.0°180.0°
N3C28C29C30126.3°120.0°
N3C28C29H29116.9°120.0°
N3C28C30H29117.4°120.0°
N3C28C29O625.9°0.1°
N3C28C30C3165.0°65.0°
N3C28C30H30173.5°55.0°
N3C28C30H3156.6°175.0°
N3C28C29N4153.1°180.0°
H28N3C28C29122.9°25.0°
H28N3C28C303.4°95.0°
H28N3C28H29120.5°145.0°
C29C28C30H29116.6°120.0°
C28C29O6N4178.9°179.9°
C29C28C30C3161.0°175.0°
C29C28C30H3060.5°65.0°
C29C28C30H31177.4°55.0°
C28C29N4C33179.5°180.0°
C28C29N4H350.5°0.0°
C29C28N3C2057.1°155.0°
C30C28C29O6100.4°120.1°
C28C30C31H30121.5°120.0°
C28C30C31H31121.6°120.0°
C28C30H30H31115.0°120.1°
C28C30C31C3282.3°180.0°
C28C30C31H3238.5°60.0°
C28C30C31H33156.9°60.1°
C30C28N3C20176.7°85.0°
C30C28C29N480.6°60.0°
H29C28C29O6142.8°120.0°
H29C28C30C31177.6°55.0°
H29C28C30H3056.1°175.0°
H29C28C30H3160.8°65.0°
H29C28N3C2059.5°35.0°
H29C28C29N436.2°59.9°
O6C29N4C331.6°0.1°
O6C29N4H35178.4°180.0°
C31C30H30H31115.0°120.0°
C30C31C32H32120.8°120.0°
C30C31C32H33120.8°120.0°
C30C31H32H33117.4°120.1°
C30C31C32O7179.5°0.1°
C30C31C32O87.5°180.0°
H30C30C31C32156.1°60.0°
H30C30C31H3283.0°180.0°
H30C30C31H3335.3°59.9°
H31C30C31C3239.2°60.0°
H31C30C31H32160.1°60.0°
H31C30C31H3381.6°179.9°
C32C31H32H33117.5°119.9°
C31C32O7O8172.9°179.9°
C31C32O8H34172.4°180.0°
H32C31C32O759.6°119.9°
H32C31C32O8113.4°60.0°
H33C31C32O758.8°120.1°
H33C31C32O8128.3°60.0°
O7C32O8H340.0°0.1°
C33N4H35C29180.0°180.0°
N4C33C34C35121.9°120.0°
N4C33C34H36119.5°120.0°
N4C33C35H36116.6°120.0°
N4C33C34O9172.6°0.0°
N4C33C35C3658.2°65.0°
N4C33C35H3762.1°55.1°
N4C33C35H38178.4°175.0°
N4C33C34N53.3°180.0°
H35N4C33C34106.4°95.0°
H35N4C33C3518.4°25.0°
H35N4C33H36134.5°145.0°
C34C33C35H36118.7°120.0°
C33C34O9N5176.0°180.0°
C34C33C35C36177.2°175.0°
C34C33C35H3762.5°65.0°
C34C33C35H3857.0°55.0°
C33C34N5H42176.0°0.0°
C33C34N5H433.9°180.0°
C34C33N4C2973.6°85.0°
C35C33C34O965.5°120.0°
C33C35C36H37120.3°120.0°
C33C35C36H38120.3°120.0°
C33C35H37H38119.2°120.0°
C33C35C36C37115.5°180.0°
C33C35C36H39123.7°60.0°
C33C35C36H405.3°60.0°
C35C33C34N5118.6°60.0°
C35C33N4C29161.6°155.0°
H36C33C34O953.1°120.0°
H36C33C35C3658.5°55.0°
H36C33C35H37178.8°175.0°
H36C33C35H3861.8°65.0°
H36C33C34N5122.7°60.0°
H36C33N4C2945.5°35.0°
O9C34N5H420.0°180.0°
O9C34N5H43180.0°0.0°
C36C35H37H38119.2°120.0°
C35C36C37H39120.8°120.0°
C35C36C37H40120.8°120.0°
C35C36H39H40117.6°120.0°
C35C36C37O10169.5°0.0°
C35C36C37O1111.7°180.0°
H37C35C36C374.8°60.0°
H37C35C36H39116.0°180.0°
H37C35C36H40125.6°60.0°
H38C35C36C37124.3°60.0°
H38C35C36H393.5°60.0°
H38C35C36H40115.0°180.0°
C37C36H39H40117.6°120.0°
C36C37O10O11178.8°180.0°
C36C37O11H41178.8°180.0°
H39C36C37O1069.8°120.0°
H39C36C37O11109.1°60.0°
H40C36C37O1048.7°120.0°
H40C36C37O11132.4°60.0°
O10C37O11H410.0°0.0°
H42N5H43C34180.0°180.0°

227111

PDB entries from 2024-11-06

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