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PRD_000389

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1Cdoub1.21Å1.23Å
CO2sing1.35Å1.38Å
O2CTsing1.45Å1.43Å
CTC1sing1.53Å1.54Å
CTC2sing1.53Å1.54Å
CTC3sing1.53Å1.55Å
C1H11sing1.09Å1.10Å
C1H12sing1.09Å1.10Å
C1H13sing1.09Å1.10Å
C2H21sing1.09Å1.10Å
C2H22sing1.09Å1.10Å
C2H23sing1.09Å1.10Å
C3H31sing1.09Å1.10Å
C3H32sing1.09Å1.10Å
C3H33sing1.09Å1.10Å
NCAsing1.46Å1.45Å
NHsing0.97Å1.00Å
CAC4sing1.51Å1.53Å
CACBsing1.53Å1.52Å
CAHAsing1.09Å1.10Å
C4Odoub1.21Å1.25Å
CBHB1sing1.09Å1.10Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
N1CA1sing1.46Å1.44Å
N1H1sing0.97Å1.00Å
CA1C5sing1.51Å1.54Å
CA1CB1sing1.53Å1.56Å
CA1HA1sing1.09Å1.10Å
C5O3doub1.21Å1.25Å
CB1CG1sing1.53Å1.50Å
CB1CG2sing1.53Å1.49Å
CB1HBsing1.09Å1.10Å
CG1HG11sing1.09Å1.10Å
CG1HG12sing1.09Å1.10Å
CG1HG13sing1.09Å1.10Å
CG2HG21sing1.09Å1.10Å
CG2HG22sing1.09Å1.10Å
CG2HG23sing1.09Å1.10Å
N2CA2sing1.47Å1.46Å
N2H2Nsing0.97Å1.00Å
CA2Bsing1.57Å1.64Å
CA2HA2sing1.09Å1.10Å
CB2CA2sing1.53Å1.52Å
CB2H1Bsing1.09Å1.10Å
CB2H2Bsing1.09Å1.10Å
CGCB2sing1.53Å1.51Å
CGH1Gsing1.09Å1.10Å
CGH2Gsing1.09Å1.10Å
CDCGsing1.53Å1.50Å
CDH1Dsing1.09Å1.10Å
CDH2Dsing1.09Å1.10Å
CECDsing1.53Å1.50Å
CEH1Esing1.09Å1.10Å
CEH2Esing1.09Å1.10Å
NZCEsing1.47Å1.44Å
NZH1NZsing1.01Å1.00Å
NZH2NZsing1.01Å1.00Å
BO4sing1.42Å1.47Å
BOXTsing1.42Å1.50Å
OXTC11sing1.43Å1.46Å
C11C21sing1.53Å1.51Å
C11H111sing1.09Å1.10Å
C11H211sing1.09Å1.10Å
C21H121sing1.09Å1.10Å
C21H221sing1.09Å1.10Å
C21H321sing1.09Å1.10Å
O4C31sing1.43Å1.44Å
C31H131sing1.09Å1.10Å
C31H231sing1.09Å1.10Å
C51C31sing1.53Å1.54Å
C51H15sing1.09Å1.10Å
C51H25sing1.09Å1.10Å
C51H35sing1.09Å1.10Å
CNsing1.35Å1.33Å
C4N1sing1.35Å1.33Å
C5N2sing1.35Å1.34Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1CO2120.1°119.9°
O1CN122.3°120.1°
CO2CT131.1°117.0°
O2CN117.6°120.0°
O2CTC1112.8°109.5°
O2CTC2108.8°109.4°
O2CTC3109.8°109.5°
C1CTC2105.6°109.4°
C1CTC3109.8°109.5°
CTC1H11109.5°109.5°
CTC1H12109.5°109.4°
CTC1H13109.5°109.5°
C2CTC3110.0°109.5°
CTC2H21109.5°109.4°
CTC2H22109.4°109.4°
CTC2H23109.5°109.5°
CTC3H31109.5°109.4°
CTC3H32109.5°109.5°
CTC3H33109.4°109.5°
H11C1H12109.4°109.4°
H11C1H13109.5°109.5°
H12C1H13109.5°109.5°
H21C2H22109.5°109.5°
H21C2H23109.5°109.5°
H22C2H23109.5°109.5°
H31C3H32109.5°109.5°
H31C3H33109.5°109.4°
H32C3H33109.5°109.5°
CANH117.3°120.1°
NCAC4112.4°109.4°
NCACB111.1°109.5°
NCAHA105.5°109.5°
CANC125.4°119.9°
HNC117.3°120.0°
C4CACB106.7°109.5°
C4CAHA109.9°109.5°
CAC4O124.6°120.0°
CAC4N1112.6°120.0°
CBCAHA111.3°109.5°
CACBHB1109.5°109.5°
CACBHB2109.5°109.5°
CACBHB3109.4°109.5°
OC4N1122.8°120.0°
HB1CBHB2109.5°109.5°
HB1CBHB3109.5°109.4°
HB2CBHB3109.5°109.5°
CA1N1H1119.2°120.0°
N1CA1C5107.3°109.4°
N1CA1CB1100.4°109.5°
N1CA1HA1121.3°109.5°
CA1N1C4121.5°120.0°
H1N1C4119.3°120.0°
C5CA1CB1121.0°109.4°
C5CA1HA1100.8°109.5°
CA1C5O3118.7°120.0°
CA1C5N2119.3°120.0°
CB1CA1HA1107.6°109.4°
CA1CB1CG1116.3°109.5°
CA1CB1CG2104.3°109.5°
CA1CB1HB110.3°109.4°
O3C5N2122.0°120.0°
CG1CB1CG2114.2°109.5°
CG1CB1HB99.4°109.4°
CB1CG1HG11109.5°109.5°
CB1CG1HG12109.5°109.4°
CB1CG1HG13109.5°109.5°
CG2CB1HB112.5°109.5°
CB1CG2HG21109.5°109.5°
CB1CG2HG22109.5°109.5°
CB1CG2HG23109.5°109.5°
HG11CG1HG12109.5°109.4°
HG11CG1HG13109.4°109.5°
HG12CG1HG13109.5°109.5°
HG21CG2HG22109.5°109.5°
HG21CG2HG23109.4°109.4°
HG22CG2HG23109.5°109.4°
CA2N2H2N118.1°120.0°
N2CA2B100.7°109.4°
N2CA2HA2117.0°109.4°
N2CA2CB2108.2°109.5°
CA2N2C5123.8°120.0°
H2NN2C5118.1°120.0°
BCA2HA2112.5°109.5°
BCA2CB2113.0°109.5°
CA2BO4116.0°120.0°
CA2BOXT118.6°120.0°
HA2CA2CB2105.5°109.5°
CA2CB2H1B109.7°109.5°
CA2CB2H2B109.8°109.5°
CA2CB2CG108.8°109.5°
H1BCB2H2B109.0°109.5°
H1BCB2CG109.7°109.5°
H2BCB2CG109.9°109.4°
CB2CGH1G109.2°109.5°
CB2CGH2G109.1°109.4°
CB2CGCD110.1°109.5°
H1GCGH2G110.0°109.5°
H1GCGCD109.3°109.5°
H2GCGCD109.1°109.5°
CGCDH1D110.8°109.5°
CGCDH2D111.7°109.5°
CGCDCE105.4°109.5°
H1DCDH2D106.4°109.5°
H1DCDCE110.8°109.5°
H2DCDCE111.7°109.4°
CDCEH1E109.1°109.5°
CDCEH2E108.8°109.4°
CDCENZ110.7°109.5°
H1ECEH2E110.4°109.5°
H1ECENZ109.1°109.5°
H2ECENZ108.8°109.5°
CENZH1NZ109.5°111.0°
CENZH2NZ109.5°111.0°
H1NZNZH2NZ109.4°110.9°
O4BOXT111.0°120.0°
BO4C31138.9°114.0°
BOXTC11129.8°114.0°
OXTC11C21122.1°109.5°
OXTC11H111105.4°109.5°
OXTC11H211102.5°109.5°
C21C11H111105.5°109.5°
C21C11H211102.5°109.4°
C11C21H121109.5°109.5°
C11C21H221109.5°109.5°
C11C21H321109.5°109.5°
H111C11H211120.0°109.4°
H121C21H221109.5°109.5°
H121C21H321109.5°109.4°
H221C21H321109.5°109.5°
O4C31H131106.6°109.5°
O4C31H231104.5°109.4°
O4C31C51118.5°109.4°
H131C31H231116.8°109.5°
H131C31C51106.6°109.5°
H231C31C51104.5°109.5°
C31C51H15109.5°109.5°
C31C51H25109.5°109.5°
C31C51H35109.5°109.4°
H15C51H25109.4°109.5°
H15C51H35109.4°109.5°
H25C51H35109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1CO2N178.5°179.8°
O1CO2CT50.1°0.0°
O1CNCA0.7°0.0°
O1CNH179.3°180.0°
CO2CTC130.6°60.0°
CO2CTC2147.4°180.0°
CO2CTC392.2°60.1°
O2CNCA179.1°179.7°
O2CNH0.9°0.2°
O2CTC1C2118.7°120.0°
O2CTC1C3122.8°120.0°
O2CTC2C3120.3°120.0°
O2CTC1H1117.7°60.0°
O2CTC1H12102.3°180.0°
O2CTC1H13137.7°60.0°
O2CTC2H2142.7°60.0°
O2CTC2H2277.3°180.0°
O2CTC2H23162.7°60.0°
O2CTC3H31108.6°60.0°
O2CTC3H3211.5°180.0°
O2CTC3H33131.5°59.9°
CTO2CN131.5°179.7°
C1CTC2C3118.4°120.0°
CTC1H11H12120.0°120.0°
CTC1H11H13120.0°120.0°
CTC1H12H13120.0°120.0°
C1CTC2H2178.6°180.0°
C1CTC2H22161.4°60.0°
C1CTC2H2341.4°60.0°
C1CTC3H31126.9°60.0°
C1CTC3H32113.1°59.9°
C1CTC3H336.9°180.0°
C2CTC1H11136.3°59.9°
C2CTC1H1216.4°60.0°
C2CTC1H13103.7°180.0°
CTC2H21H22120.0°119.9°
CTC2H21H23120.0°120.0°
CTC2H22H23120.0°120.0°
C2CTC3H3111.1°180.0°
C2CTC3H32131.1°60.0°
C2CTC3H33108.9°60.1°
C3CTC1H11105.2°180.0°
C3CTC1H12134.9°60.0°
C3CTC1H1314.8°60.0°
C3CTC2H21163.0°60.0°
C3CTC2H2243.0°60.0°
C3CTC2H2377.0°180.0°
CTC3H31H32120.0°120.0°
CTC3H31H33120.0°120.0°
CTC3H32H33120.0°120.1°
H11C1H12H13120.0°120.0°
H21C2H22H23120.0°120.1°
H31C3H32H33120.0°120.0°
CANHC180.0°180.0°
NCAC4CB122.1°120.0°
NCAC4HA117.2°120.0°
NCACBHA117.2°120.1°
NCAC4O34.0°0.0°
NCACBHB11.9°180.0°
NCACBHB2118.1°60.0°
NCACBHB3121.9°60.0°
NCAC4N1148.9°180.0°
HNCAC424.4°25.0°
HNCACB95.1°95.0°
HNCAHA144.2°145.0°
C4CACBHA119.9°120.0°
CAC4ON1176.8°180.0°
C4CACBHB1124.8°60.0°
C4CACBHB24.7°180.0°
C4CACBHB3115.2°60.0°
CAC4N1CA1177.7°180.0°
CAC4N1H12.3°0.0°
C4CANC155.6°155.0°
CBCAC4O88.0°120.0°
CACBHB1HB2120.0°120.0°
CACBHB1HB3120.0°120.0°
CACBHB2HB3120.0°120.0°
CBCANC84.9°85.0°
CBCAC4N189.0°60.0°
HACAC4O151.2°120.0°
HACACBHB1115.3°60.0°
HACACBHB2124.7°60.0°
HACACBHB34.7°179.9°
HACANC35.8°35.0°
HACAC4N131.8°60.0°
OC4N1CA10.6°0.0°
OC4N1H1179.4°180.0°
HB1CBHB2HB3120.0°120.0°
CA1N1H1C4180.0°180.0°
N1CA1C5CB1114.0°120.0°
N1CA1C5HA1127.7°120.0°
N1CA1CB1HA1127.7°120.0°
N1CA1C5O324.6°27.8°
N1CA1CB1CG189.9°69.1°
N1CA1CB1CG2143.4°170.9°
N1CA1CB1HB22.3°50.8°
N1CA1C5N2152.8°152.2°
H1N1CA1C596.3°25.0°
H1N1CA1CB130.9°95.0°
H1N1CA1HA1149.0°145.0°
C5CA1CB1HA1114.8°120.0°
CA1C5O3N2177.3°180.0°
C5CA1CB1CG127.7°50.9°
C5CA1CB1CG299.1°69.1°
C5CA1CB1HB139.8°170.8°
CA1C5N2CA2174.0°172.0°
CA1C5N2H2N6.0°8.0°
C5CA1N1C483.7°155.0°
CB1CA1C5O389.4°92.2°
CA1CB1CG1CG2121.6°120.0°
CA1CB1CG1HB118.3°119.9°
CA1CB1CG2HB119.6°120.0°
CA1CB1CG1HG11100.7°55.9°
CA1CB1CG1HG1219.3°175.9°
CA1CB1CG1HG13139.3°64.1°
CA1CB1CG2HG21113.1°64.1°
CA1CB1CG2HG226.9°175.9°
CA1CB1CG2HG23126.9°55.9°
CB1CA1N1C4149.1°85.0°
CB1CA1C5N293.2°87.8°
HA1CA1C5O3152.3°147.8°
HA1CA1CB1CG1142.4°170.9°
HA1CA1CB1CG215.7°50.8°
HA1CA1CB1HB105.4°69.2°
HA1CA1N1C431.0°35.0°
HA1CA1C5N225.1°32.2°
O3C5N2CA23.3°8.1°
O3C5N2H2N176.7°171.9°
CG1CB1CG2HB112.4°120.0°
CB1CG1HG11HG12120.0°120.0°
CB1CG1HG11HG13120.0°120.1°
CB1CG1HG12HG13120.0°120.0°
CG1CB1CG2HG2114.9°175.9°
CG1CB1CG2HG22134.9°55.8°
CG1CB1CG2HG23105.1°64.1°
CG2CB1CG1HG11137.7°64.1°
CG2CB1CG1HG12102.3°55.8°
CG2CB1CG1HG1317.7°175.8°
CB1CG2HG21HG22120.0°120.0°
CB1CG2HG21HG23120.0°120.0°
CB1CG2HG22HG23120.0°120.0°
HBCB1CG1HG1117.6°175.9°
HBCB1CG1HG12137.7°64.2°
HBCB1CG1HG13102.3°55.8°
HBCB1CG2HG21127.3°55.9°
HBCB1CG2HG22112.7°64.1°
HBCB1CG2HG237.3°175.9°
HG11CG1HG12HG13119.9°120.0°
HG21CG2HG22HG23119.9°119.9°
CA2N2H2NC5180.0°180.0°
N2CA2BHA2125.3°119.9°
N2CA2BCB2115.2°120.0°
N2CA2HA2CB2120.4°120.0°
N2CA2CB2H1B44.8°58.3°
N2CA2CB2H2B164.5°61.8°
N2CA2CB2CG75.2°178.3°
N2CA2BO438.0°122.1°
N2CA2BOXT174.2°57.9°
H2NN2CA2B67.6°84.2°
H2NN2CA2HA2170.1°155.8°
H2NN2CA2CB251.2°35.8°
BCA2HA2CB2123.7°120.1°
BCA2CB2H1B65.8°178.2°
BCA2CB2H2B53.9°58.2°
BCA2CB2CG174.2°61.7°
CA2BO4OXT139.4°179.9°
CA2BOXTC11141.5°3.9°
CA2BO4C3171.4°5.2°
BCA2N2C5112.4°95.8°
HA2CA2CB2H1B170.8°61.7°
HA2CA2CB2H2B69.5°178.2°
HA2CA2CB2CG50.8°58.3°
HA2CA2BO487.3°2.2°
HA2CA2BOXT48.8°177.9°
HA2CA2N2C59.9°24.2°
CA2CB2H1BH2B120.2°120.0°
CA2CB2H1BCG119.4°120.0°
CA2CB2H2BCG119.6°119.9°
CA2CB2CGH1G64.5°55.1°
CA2CB2CGH2G55.7°64.9°
CA2CB2CGCD175.4°175.2°
CB2CA2BO4153.2°117.9°
CB2CA2BOXT70.6°62.1°
CB2CA2N2C5128.8°144.2°
H1BCB2H2BCG120.2°120.0°
H1BCB2CGH1G175.5°175.2°
H1BCB2CGH2G64.3°55.2°
H1BCB2CGCD55.5°64.8°
H2BCB2CGH1G55.7°64.9°
H2BCB2CGH2G176.0°175.2°
H2BCB2CGCD64.3°55.2°
CB2CGH1GH2G119.7°119.9°
CB2CGH1GCD120.5°120.1°
CB2CGH2GCD120.4°120.0°
CB2CGCDH1D62.8°59.9°
CB2CGCDH2D55.6°60.1°
CB2CGCDCE177.2°180.0°
H1GCGH2GCD119.8°120.0°
H1GCGCDH1D177.2°180.0°
H1GCGCDH2D64.4°60.0°
H1GCGCDCE57.2°59.9°
H2GCGCDH1D56.9°60.0°
H2GCGCDH2D175.3°180.0°
H2GCGCDCE63.1°60.1°
CGCDH1DH2D121.6°120.0°
CGCDH1DCE116.7°120.1°
CGCDH2DCE117.8°120.0°
CGCDCEH1E64.8°59.9°
CGCDCEH2E55.7°60.1°
CGCDCENZ175.2°180.0°
H1DCDH2DCE121.1°120.0°
H1DCDCEH1E175.2°180.0°
H1DCDCEH2E64.3°60.0°
H1DCDCENZ55.2°60.0°
H2DCDCEH1E56.7°60.0°
H2DCDCEH2E177.2°180.0°
H2DCDCENZ63.3°60.0°
CDCEH1EH2E119.5°119.9°
CDCEH1ENZ121.0°120.0°
CDCEH2ENZ120.7°119.9°
CDCENZH1NZ23.8°56.1°
CDCENZH2NZ143.8°180.0°
H1ECEH2ENZ119.7°120.1°
H1ECENZH1NZ96.2°63.9°
H1ECENZH2NZ23.8°60.0°
H2ECENZH1NZ143.3°176.0°
H2ECENZH2NZ96.7°60.1°
CENZH1NZH2NZ120.0°123.9°
O4BOXTC113.3°176.2°
BO4C31H131109.4°65.0°
BO4C31H231126.3°55.0°
BO4C31C5110.5°175.0°
BOXTC11C2151.4°173.6°
BOXTC11H11168.5°66.3°
BOXTC11H211165.1°53.7°
OXTBO4C3168.0°174.8°
OXTC11C21H111120.0°120.1°
OXTC11C21H211113.6°120.0°
OXTC11H111H211114.8°120.0°
OXTC11C21H121166.8°175.1°
OXTC11C21H22146.8°55.0°
OXTC11C21H32173.2°65.0°
C21C11H111H211114.8°119.9°
C11C21H121H221120.0°120.1°
C11C21H121H321120.0°120.0°
C11C21H221H321120.0°120.0°
H111C11C21H12173.2°64.9°
H111C11C21H221166.8°175.0°
H111C11C21H32146.8°55.0°
H211C11C21H12153.2°55.1°
H211C11C21H22166.8°65.0°
H211C11C21H321173.2°175.0°
H121C21H221H321120.0°119.9°
O4C31H131H231116.3°120.0°
O4C31H131C51127.4°119.9°
O4C31H231C51125.1°119.9°
O4C31C51H1566.2°60.0°
O4C31C51H2553.8°60.0°
O4C31C51H35173.9°180.0°
H131C31H231C51117.4°120.1°
H131C31C51H15173.8°180.0°
H131C31C51H2566.2°60.0°
H131C31C51H3553.8°60.0°
H231C31C51H1549.6°59.9°
H231C31C51H25169.6°180.0°
H231C31C51H3570.4°60.1°
C31C51H15H25120.0°120.1°
C31C51H15H35120.0°119.9°
C31C51H25H35120.0°119.9°
H15C51H25H35120.0°120.0°

222624

PDB entries from 2024-07-17

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