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PRD_000368

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.58Å
C1Odoub1.21Å1.25Å
C2F1sing1.40Å1.31Å
C2F2sing1.40Å1.32Å
C2F3sing1.40Å1.31Å
NCAsing1.47Å1.45Å
NHsing0.97Å1.00Å
CACsing1.51Å1.52Å
CACBsing1.53Å1.52Å
CAHAsing1.09Å1.10Å
CO1doub1.21Å1.23Å
CBCGsing1.53Å1.51Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
CGCDsing1.53Å1.52Å
CGHG2sing1.09Å1.10Å
CGHG3sing1.09Å1.10Å
CDCEsing1.53Å1.53Å
CDHD2sing1.09Å1.10Å
CDHD3sing1.09Å1.10Å
CENZsing1.47Å1.46Å
CEHE2sing1.09Å1.10Å
CEHE3sing1.09Å1.10Å
NZHZ1sing1.01Å1.00Å
NZHZ2sing1.01Å1.00Å
NZHZ3sing1.01Å1.00Å
N1CA1sing1.47Å1.44Å
N1H1sing0.97Å1.00Å
CA1C3sing1.51Å1.53Å
CA1CB1sing1.53Å1.57Å
CA1HA1sing1.09Å1.10Å
C3O2doub1.21Å1.23Å
CB1CG1sing1.53Å1.56Å
CB1HB21sing1.09Å1.10Å
CB1HB31sing1.09Å1.10Å
CG1CD1sing1.53Å1.49Å
CG1CD2sing1.53Å1.48Å
CG1HGsing1.09Å1.10Å
CD1HD11sing1.09Å1.10Å
CD1HD12sing1.09Å1.10Å
CD1HD13sing1.09Å1.10Å
CD2HD21sing1.09Å1.10Å
CD2HD22sing1.09Å1.10Å
CD2HD23sing1.09Å1.10Å
C11N11sing1.40Å1.35Å
C11C21doub1.39Å1.39ÅAromatic
C11C6sing1.39Å1.38ÅAromatic
N11HN11sing0.97Å1.00Å
C21C31sing1.38Å1.39ÅAromatic
C21H2sing1.08Å1.08Å
C31C4doub1.38Å1.39ÅAromatic
C31H3sing1.08Å1.08Å
C4C5sing1.38Å1.37ÅAromatic
C4C1'sing1.51Å1.53Å
C5C6doub1.38Å1.37ÅAromatic
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C1'C2'sing1.53Å1.53Å
C1'C3'sing1.53Å1.52Å
C1'H1'sing1.09Å1.10Å
C2'H2'1sing1.09Å1.10Å
C2'H2'2sing1.09Å1.10Å
C2'H2'3sing1.09Å1.10Å
C3'H3'1sing1.09Å1.10Å
C3'H3'2sing1.09Å1.10Å
C3'H3'3sing1.09Å1.10Å
C1Nsing1.35Å1.35Å
CN1sing1.35Å1.35Å
C3N11sing1.35Å1.35Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O123.8°120.0°
C1C2F1116.5°109.5°
C1C2F2116.9°109.5°
C1C2F3108.7°109.5°
C2C1N116.9°120.0°
OC1N119.2°120.0°
F1C2F2104.2°109.5°
F1C2F3104.0°109.5°
F2C2F3105.2°109.4°
CANH119.2°120.0°
NCAC100.3°109.4°
NCACB114.0°109.4°
NCAHA112.4°109.5°
CANC1121.7°120.0°
HNC1119.1°120.0°
CCACB108.9°109.5°
CCAHA117.3°109.5°
CACO1122.1°120.1°
CACN1113.1°120.0°
CBCAHA104.4°109.5°
CACBCG113.2°109.5°
CACBHB2108.3°109.4°
CACBHB3107.4°109.4°
O1CN1124.7°120.0°
CGCBHB2108.2°109.5°
CGCBHB3107.4°109.5°
CBCGCD111.1°109.5°
CBCGHG2108.9°109.5°
CBCGHG3108.6°109.5°
HB2CBHB3112.5°109.5°
CDCGHG2109.0°109.5°
CDCGHG3108.6°109.5°
CGCDCE111.4°109.5°
CGCDHD2108.9°109.5°
CGCDHD3108.4°109.5°
HG2CGHG3110.8°109.4°
CECDHD2108.8°109.5°
CECDHD3108.4°109.5°
CDCENZ109.9°109.5°
CDCEHE2109.3°109.5°
CDCEHE3109.2°109.5°
HD2CDHD3111.0°109.4°
NZCEHE2109.3°109.4°
NZCEHE3109.2°109.5°
CENZHZ1109.5°109.5°
CENZHZ2109.5°109.5°
CENZHZ3109.5°109.5°
HE2CEHE3109.8°109.5°
HZ1NZHZ2109.5°109.5°
HZ1NZHZ3109.5°109.5°
HZ2NZHZ3109.5°109.4°
CA1N1H1117.6°120.0°
N1CA1C395.0°109.5°
N1CA1CB1109.0°109.4°
N1CA1HA1121.2°109.5°
CA1N1C124.7°120.0°
H1N1C117.7°120.0°
C3CA1CB1116.4°109.5°
C3CA1HA1114.3°109.5°
CA1C3O2124.5°120.0°
CA1C3N11106.2°120.0°
CB1CA1HA1101.7°109.5°
CA1CB1CG1121.1°109.5°
CA1CB1HB21105.7°109.5°
CA1CB1HB31103.0°109.5°
O2C3N11129.0°120.0°
CG1CB1HB21105.8°109.5°
CG1CB1HB31103.0°109.5°
CB1CG1CD1112.2°109.5°
CB1CG1CD2111.8°109.5°
CB1CG1HG102.6°109.5°
HB21CB1HB31119.1°109.4°
CD1CG1CD295.0°109.5°
CD1CG1HG117.7°109.5°
CG1CD1HD11109.5°109.5°
CG1CD1HD12109.4°109.5°
CG1CD1HD13109.5°109.5°
CD2CG1HG118.0°109.5°
CG1CD2HD21109.5°109.5°
CG1CD2HD22109.5°109.5°
CG1CD2HD23109.5°109.5°
HD11CD1HD12109.4°109.5°
HD11CD1HD13109.5°109.4°
HD12CD1HD13109.6°109.4°
HD21CD2HD22109.5°109.5°
HD21CD2HD23109.5°109.4°
HD22CD2HD23109.5°109.5°
N11C11C21125.5°120.0°
N11C11C6114.8°120.1°
C11N11HN11118.6°120.0°
C11N11C3122.7°120.1°
C21C11C6119.3°119.9°
C11C21C31119.1°119.9°
C11C21H2120.4°120.1°
C11C6C5121.5°119.9°
C11C6H6119.2°120.0°
HN11N11C3118.7°120.0°
C31C21H2120.5°120.0°
C21C31C4120.4°120.1°
C21C31H3119.8°119.9°
C4C31H3119.8°120.0°
C31C4C5119.6°120.1°
C31C4C1'122.8°119.9°
C5C4C1'117.6°119.9°
C4C5C6120.1°120.1°
C4C5H5120.0°119.9°
C4C1'C2'110.4°109.5°
C4C1'C3'107.2°109.4°
C4C1'H1'113.3°109.5°
C6C5H5120.0°120.0°
C5C6H6119.3°120.1°
C2'C1'C3'116.8°109.5°
C2'C1'H1'102.9°109.5°
C1'C2'H2'1109.5°109.5°
C1'C2'H2'2109.5°109.5°
C1'C2'H2'3109.5°109.5°
C3'C1'H1'106.3°109.5°
C1'C3'H3'1109.5°109.5°
C1'C3'H3'2109.5°109.5°
C1'C3'H3'3109.4°109.4°
H2'1C2'H2'2109.5°109.5°
H2'1C2'H2'3109.4°109.5°
H2'2C2'H2'3109.5°109.5°
H3'1C3'H3'2109.4°109.5°
H3'1C3'H3'3109.5°109.4°
H3'2C3'H3'3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1ON174.8°179.6°
C1C2F1F2130.4°120.0°
C1C2F1F3119.6°120.0°
C1C2F2F3120.7°120.0°
C2C1NCA165.6°180.0°
C2C1NH14.4°0.0°
OC1C2F1121.2°0.0°
OC1C2F22.9°120.1°
OC1C2F3121.8°120.0°
OC1NCA19.2°0.3°
OC1NH160.8°179.7°
F1C2F2F3109.1°120.0°
F1C2C1N53.7°179.7°
F2C2C1N177.9°60.3°
F3C2C1N63.3°59.7°
CANHC1180.0°180.0°
NCACCB120.0°119.9°
NCACHA121.9°120.0°
NCACBHA123.0°120.0°
NCACO1133.6°20.0°
NCACBCG123.4°65.0°
NCACBHB23.4°55.0°
NCACBHB3118.2°174.9°
NCACN143.0°160.0°
HNCAC62.9°120.0°
HNCACB53.2°120.0°
HNCAHA171.7°0.0°
CCACBHA126.0°120.1°
CACO1N1176.3°180.0°
CCACBCG125.5°175.0°
CCACBHB2114.5°65.0°
CCACBHB37.1°55.0°
CACN1CA1170.6°174.9°
CACN1H19.4°5.0°
CCANC1117.1°60.0°
CBCACO113.7°100.0°
CACBCGHB2120.0°120.0°
CACBCGHB3118.3°120.0°
CACBHB2HB3118.5°119.9°
CACBCGCD76.2°180.0°
CACBCGHG243.8°59.9°
CACBCGHG3164.5°60.0°
CBCANC1126.8°60.0°
CBCACN1163.0°80.0°
HACACO1104.4°140.0°
HACACBCG0.5°54.9°
HACACBHB2119.5°174.9°
HACACBHB3118.8°65.1°
HACANC18.3°179.9°
HACACN178.9°40.0°
O1CN1CA112.8°5.1°
O1CN1H1167.2°175.0°
CGCBHB2HB3118.5°120.1°
CBCGCDHG2120.0°120.1°
CBCGCDHG3119.3°120.0°
CBCGHG2HG3119.3°120.0°
CBCGCDCE167.9°180.0°
CBCGCDHD247.9°60.0°
CBCGCDHD372.9°60.0°
HB2CBCGCD163.8°60.0°
HB2CBCGHG276.2°179.9°
HB2CBCGHG344.5°60.0°
HB3CBCGCD42.1°60.0°
HB3CBCGHG2162.1°60.0°
HB3CBCGHG377.2°180.0°
CDCGHG2HG3119.4°120.0°
CGCDCEHD2120.0°120.1°
CGCDCEHD3119.2°120.0°
CGCDHD2HD3119.2°120.0°
CGCDCENZ179.8°179.9°
CGCDCEHE259.8°60.0°
CGCDCEHE360.3°60.0°
HG2CGCDCE72.1°59.9°
HG2CGCDHD2167.9°180.0°
HG2CGCDHD347.1°60.0°
HG3CGCDCE48.7°60.0°
HG3CGCDHD271.4°60.0°
HG3CGCDHD3167.8°180.0°
CECDHD2HD3119.2°120.0°
CDCENZHE2120.0°120.0°
CDCENZHE3119.8°120.0°
CDCEHE2HE3119.8°120.1°
CDCENZHZ180.6°180.0°
CDCENZHZ239.4°60.0°
CDCENZHZ3159.4°60.0°
HD2CDCENZ60.1°60.0°
HD2CDCEHE2179.8°179.9°
HD2CDCEHE359.7°60.0°
HD3CDCENZ60.7°60.0°
HD3CDCEHE259.4°60.0°
HD3CDCEHE3179.5°180.0°
NZCEHE2HE3119.8°120.0°
CENZHZ1HZ2120.0°120.0°
CENZHZ1HZ3120.0°120.1°
CENZHZ2HZ3120.0°120.0°
HE2CENZHZ1159.4°60.0°
HE2CENZHZ280.6°180.0°
HE2CENZHZ339.4°60.0°
HE3CENZHZ139.3°60.0°
HE3CENZHZ2159.3°60.0°
HE3CENZHZ380.7°180.0°
HZ1NZHZ2HZ3120.0°120.0°
CA1N1H1C180.0°179.9°
N1CA1C3CB1114.2°119.9°
N1CA1C3HA1127.6°120.0°
N1CA1CB1HA1129.1°120.0°
N1CA1C3O289.8°14.1°
N1CA1CB1CG178.0°173.8°
N1CA1CB1HB2142.0°53.9°
N1CA1CB1HB31167.8°66.1°
N1CA1C3N1196.5°165.9°
H1N1CA1C3101.5°28.5°
H1N1CA1CB118.7°91.5°
H1N1CA1HA1136.0°148.5°
C3CA1CB1HA1124.9°120.0°
CA1C3O2N11172.2°180.0°
C3CA1CB1CG1176.0°66.2°
C3CA1CB1HB2164.0°173.8°
C3CA1CB1HB3161.8°53.9°
CA1C3N11C11151.0°175.1°
CA1C3N11HN1129.1°5.0°
C3CA1N1C78.5°151.4°
CB1CA1C3O224.4°105.9°
CA1CB1CG1HB21120.0°120.0°
CA1CB1CG1HB31114.2°120.1°
CA1CB1HB21HB31115.2°120.0°
CA1CB1CG1CD1119.3°66.3°
CA1CB1CG1CD214.0°173.7°
CA1CB1CG1HG113.5°53.7°
CB1CA1N1C161.3°88.6°
CB1CA1C3N11149.3°74.2°
HA1CA1C3O2142.6°134.1°
HA1CA1CB1CG151.1°53.8°
HA1CA1CB1HB21171.1°66.2°
HA1CA1CB1HB3163.2°173.9°
HA1CA1N1C44.0°31.4°
HA1CA1C3N1131.1°45.8°
O2C3N11C1135.7°4.9°
O2C3N11HN11144.2°175.1°
CG1CB1HB21HB31115.2°120.0°
CB1CG1CD1CD2116.0°120.0°
CB1CG1CD1HG118.6°120.0°
CB1CG1CD2HG118.6°120.0°
CB1CG1CD1HD11100.2°175.8°
CB1CG1CD1HD12139.8°55.8°
CB1CG1CD1HD1319.8°64.2°
CB1CG1CD2HD21125.1°60.0°
CB1CG1CD2HD22114.8°180.0°
CB1CG1CD2HD235.1°60.0°
HB21CB1CG1CD1120.7°53.7°
HB21CB1CG1CD2134.0°66.3°
HB21CB1CG1HG6.5°173.7°
HB31CB1CG1CD15.1°173.6°
HB31CB1CG1CD2100.3°53.6°
HB31CB1CG1HG132.3°66.4°
CD1CG1CD2HG125.1°120.0°
CG1CD1HD11HD12120.0°120.1°
CG1CD1HD11HD13120.0°120.0°
CG1CD1HD12HD13120.0°120.0°
CD1CG1CD2HD21118.5°180.0°
CD1CG1CD2HD221.5°60.0°
CD1CG1CD2HD23121.5°60.0°
CD2CG1CD1HD1115.8°64.1°
CD2CG1CD1HD12104.1°175.8°
CD2CG1CD1HD13135.8°55.8°
CG1CD2HD21HD22120.0°120.0°
CG1CD2HD21HD23120.0°120.0°
CG1CD2HD22HD23120.0°120.0°
HGCG1CD1HD11141.2°55.8°
HGCG1CD1HD1221.2°64.2°
HGCG1CD1HD1398.9°175.8°
HGCG1CD2HD216.6°60.0°
HGCG1CD2HD22126.6°60.0°
HGCG1CD2HD23113.4°180.0°
HD11CD1HD12HD13120.0°119.9°
HD21CD2HD22HD23120.0°120.0°
N11C11C21C6171.8°179.6°
C11N11HN11C3180.0°180.0°
N11C11C21C31170.3°179.9°
N11C11C21H29.7°0.1°
N11C11C6C5171.4°179.8°
N11C11C6H68.6°0.1°
C21C11N11HN11144.5°145.0°
C11C21C31H2180.0°180.0°
C11C21C31C40.6°0.0°
C11C21C31H3179.4°180.0°
C21C11C6C51.2°0.6°
C21C11C6H6178.8°179.7°
C21C11N11C335.5°35.0°
C6C11N11HN1143.5°35.4°
C6C11C21C311.4°0.3°
C6C11C21H2178.6°179.7°
C11C6C5C40.1°0.6°
C11C6C5H6180.0°179.7°
C11C6C5H5179.9°179.7°
C6C11N11C3136.6°144.7°
C21C31C4H3180.0°180.0°
C21C31C4C50.4°0.0°
C21C31C4C1'177.2°180.0°
H2C21C31C4179.4°180.0°
H2C21C31H30.6°0.0°
C31C4C5C1'177.8°180.0°
C31C4C5C60.7°0.3°
C31C4C5H5179.3°179.9°
C31C4C1'C2'41.7°120.0°
C31C4C1'C3'86.5°120.0°
C31C4C1'H1'156.5°0.0°
H3C31C4C5179.6°180.0°
H3C31C4C1'2.8°0.0°
C4C5C6H5180.0°179.8°
C4C5C6H6179.9°179.7°
C5C4C1'C2'136.0°60.0°
C5C4C1'C3'95.7°60.0°
C5C4C1'H1'21.3°180.0°
C1'C4C5C6177.1°179.7°
C1'C4C5H52.9°0.1°
C4C1'C2'C3'122.8°120.0°
C4C1'C2'H1'121.2°120.0°
C4C1'C3'H1'121.5°120.0°
C4C1'C2'H2'115.9°60.0°
C4C1'C2'H2'2104.1°179.9°
C4C1'C2'H2'3135.8°60.0°
C4C1'C3'H3'178.9°60.0°
C4C1'C3'H3'241.1°60.0°
C4C1'C3'H3'3161.1°180.0°
H5C5C6H60.1°0.0°
C2'C1'C3'H1'114.1°120.0°
C1'C2'H2'1H2'2120.0°120.0°
C1'C2'H2'1H2'3120.0°120.0°
C1'C2'H2'2H2'3120.0°120.0°
C2'C1'C3'H3'1156.7°60.0°
C2'C1'C3'H3'283.3°180.0°
C2'C1'C3'H3'336.7°60.0°
C3'C1'C2'H2'1106.9°60.0°
C3'C1'C2'H2'2133.1°60.0°
C3'C1'C2'H2'313.0°180.0°
C1'C3'H3'1H3'2120.0°120.0°
C1'C3'H3'1H3'3120.0°119.9°
C1'C3'H3'2H3'3120.0°120.0°
H1'C1'C2'H2'1137.1°180.0°
H1'C1'C2'H2'217.0°60.0°
H1'C1'C2'H2'3103.0°60.0°
H1'C1'C3'H3'142.6°180.0°
H1'C1'C3'H3'2162.6°60.0°
H1'C1'C3'H3'377.4°60.1°
H2'1C2'H2'2H2'3120.0°120.0°
H3'1C3'H3'2H3'3120.0°120.0°

223532

PDB entries from 2024-08-07

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