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PRD_000367

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.63Å
C1Odoub1.21Å1.25Å
C2F1sing1.40Å1.35Å
C2F2sing1.40Å1.37Å
C2F3sing1.40Å1.36Å
NCAsing1.47Å1.50Å
NHsing0.97Å1.00Å
CACsing1.51Å1.53Å
CACBsing1.53Å1.53Å
CAHAsing1.09Å1.10Å
CO1doub1.21Å1.22Å
CBCGsing1.53Å1.53Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
CGCDsing1.53Å1.52Å
CGHG2sing1.09Å1.10Å
CGHG3sing1.09Å1.10Å
CDCEsing1.53Å1.54Å
CDHD2sing1.09Å1.10Å
CDHD3sing1.09Å1.10Å
CENZsing1.47Å1.45Å
CEHE2sing1.09Å1.10Å
CEHE3sing1.09Å1.10Å
NZHZ1sing1.01Å1.00Å
NZHZ2sing1.01Å1.00Å
NZHZ3sing1.01Å1.00Å
N1CA1sing1.46Å1.44Å
N1H1sing0.97Å1.00Å
CA1C3sing1.51Å1.54Å
CA1CB1sing1.53Å1.51Å
CA1HA1sing1.09Å1.10Å
C3O2doub1.21Å1.25Å
CB1CG1sing1.51Å1.48Å
CB1HB21sing1.09Å1.10Å
CB1HB31sing1.09Å1.10Å
CG1CD1doub1.38Å1.38ÅAromatic
CG1CD2sing1.38Å1.37ÅAromatic
CD1CE1sing1.38Å1.38ÅAromatic
CD1HD1sing1.08Å1.08Å
CD2CE2doub1.38Å1.38ÅAromatic
CD2HD21sing1.08Å1.08Å
CE1CZdoub1.38Å1.39ÅAromatic
CE1HE1sing1.08Å1.08Å
CE2CZsing1.38Å1.37ÅAromatic
CE2HE21sing1.08Å1.08Å
CZHZsing1.08Å1.08Å
C11N11sing1.40Å1.34Å
C11C21doub1.39Å1.40ÅAromatic
C11C6sing1.39Å1.41ÅAromatic
N11HN11sing0.97Å1.00Å
C21C31sing1.38Å1.38ÅAromatic
C21H2sing1.08Å1.08Å
C31C4doub1.38Å1.41ÅAromatic
C31H3sing1.08Å1.08Å
C4C5sing1.38Å1.41ÅAromatic
C4C1'sing1.51Å1.55Å
C5C6doub1.38Å1.39ÅAromatic
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C1'C2'sing1.53Å1.54Å
C1'C3'sing1.53Å1.51Å
C1'H1'sing1.09Å1.10Å
C2'H2'1sing1.09Å1.10Å
C2'H2'2sing1.09Å1.10Å
C2'H2'3sing1.09Å1.10Å
C3'H3'1sing1.09Å1.10Å
C3'H3'2sing1.09Å1.10Å
C3'H3'3sing1.09Å1.10Å
C1Nsing1.35Å1.37Å
CN1sing1.35Å1.33Å
C3N11sing1.35Å1.38Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O121.6°120.0°
C1C2F1119.0°109.5°
C1C2F2111.0°109.5°
C1C2F3113.9°109.4°
C2C1N121.7°120.0°
OC1N116.4°120.0°
F1C2F2103.4°109.5°
F1C2F3103.8°109.5°
F2C2F3104.3°109.5°
CANH117.0°120.0°
NCAC101.7°109.5°
NCACB118.0°109.4°
NCAHA108.0°109.5°
CANC1126.1°120.0°
HNC1116.9°120.0°
CCACB105.4°109.5°
CCAHA120.0°109.5°
CACO1126.2°120.0°
CACN1107.2°120.0°
CBCAHA104.5°109.5°
CACBCG108.8°109.5°
CACBHB2109.7°109.5°
CACBHB3109.8°109.4°
O1CN1126.1°120.0°
CGCBHB2109.7°109.5°
CGCBHB3109.8°109.5°
CBCGCD111.9°109.5°
CBCGHG2108.6°109.5°
CBCGHG3108.1°109.4°
HB2CBHB3109.0°109.5°
CDCGHG2108.7°109.5°
CDCGHG3108.1°109.5°
CGCDCE112.4°109.5°
CGCDHD2108.5°109.4°
CGCDHD3107.8°109.5°
HG2CGHG3111.5°109.5°
CECDHD2108.5°109.5°
CECDHD3107.8°109.5°
CDCENZ112.1°109.5°
CDCEHE2108.6°109.5°
CDCEHE3108.0°109.5°
HD2CDHD3111.8°109.5°
NZCEHE2108.6°109.5°
NZCEHE3108.0°109.5°
CENZHZ1109.5°109.5°
CENZHZ2109.5°109.5°
CENZHZ3109.4°109.5°
HE2CEHE3111.5°109.5°
HZ1NZHZ2109.5°109.4°
HZ1NZHZ3109.5°109.5°
HZ2NZHZ3109.5°109.5°
CA1N1H1116.4°120.1°
N1CA1C3116.5°109.5°
N1CA1CB197.6°109.5°
N1CA1HA1115.8°109.5°
CA1N1C127.2°120.0°
H1N1C116.4°120.0°
C3CA1CB1116.9°109.4°
C3CA1HA196.0°109.5°
CA1C3O2120.5°120.0°
CA1C3N11108.7°120.0°
CB1CA1HA1115.4°109.5°
CA1CB1CG1112.3°109.4°
CA1CB1HB21108.6°109.5°
CA1CB1HB31107.9°109.5°
O2C3N11130.1°120.0°
CG1CB1HB21108.5°109.5°
CG1CB1HB31107.9°109.5°
CB1CG1CD1120.6°120.0°
CB1CG1CD2118.0°120.0°
HB21CB1HB31111.7°109.4°
CD1CG1CD2121.4°120.1°
CG1CD1CE1119.5°119.9°
CG1CD1HD1120.2°120.1°
CG1CD2CE2119.1°120.0°
CG1CD2HD21120.5°120.1°
CE1CD1HD1120.2°120.0°
CD1CE1CZ119.0°120.0°
CD1CE1HE1120.5°119.9°
CE2CD2HD21120.4°120.0°
CD2CE2CZ120.2°120.0°
CD2CE2HE21119.9°120.0°
CZCE1HE1120.5°120.0°
CE1CZCE2120.8°120.0°
CE1CZHZ119.6°120.0°
CZCE2HE21119.9°120.0°
CE2CZHZ119.6°120.0°
N11C11C21120.4°120.1°
N11C11C6119.2°120.1°
C11N11HN11116.2°120.0°
C11N11C3127.5°120.0°
C21C11C6119.6°119.8°
C11C21C31119.9°119.9°
C11C21H2120.0°120.0°
C11C6C5120.6°119.9°
C11C6H6119.7°120.0°
HN11N11C3116.3°120.0°
C31C21H2120.0°120.0°
C21C31C4121.0°120.1°
C21C31H3119.5°120.0°
C4C31H3119.5°120.0°
C31C4C5119.5°120.1°
C31C4C1'118.2°119.9°
C5C4C1'122.3°119.9°
C4C5C6119.5°120.1°
C4C5H5120.3°120.0°
C4C1'C2'107.2°109.5°
C4C1'C3'111.6°109.5°
C4C1'H1'111.1°109.5°
C6C5H5120.3°119.9°
C5C6H6119.7°120.1°
C2'C1'C3'113.6°109.4°
C2'C1'H1'109.0°109.4°
C1'C2'H2'1109.5°109.5°
C1'C2'H2'2109.5°109.5°
C1'C2'H2'3109.5°109.5°
C3'C1'H1'104.3°109.5°
C1'C3'H3'1109.5°109.5°
C1'C3'H3'2109.4°109.5°
C1'C3'H3'3109.4°109.5°
H2'1C2'H2'2109.4°109.4°
H2'1C2'H2'3109.5°109.4°
H2'2C2'H2'3109.5°109.5°
H3'1C3'H3'2109.5°109.4°
H3'1C3'H3'3109.4°109.4°
H3'2C3'H3'3109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1ON173.6°179.8°
C1C2F1F2123.6°120.0°
C1C2F1F3127.8°120.0°
C1C2F2F3123.0°119.9°
C2C1NCA162.3°180.0°
C2C1NH17.7°0.1°
OC1C2F173.6°0.1°
OC1C2F246.1°120.0°
OC1C2F3163.4°120.1°
OC1NCA24.1°0.2°
OC1NH155.9°179.7°
F1C2F2F3108.3°120.0°
F1C2C1N99.7°179.8°
F2C2C1N140.6°60.2°
F3C2C1N23.3°59.8°
CANHC1180.0°179.9°
NCACCB123.7°120.0°
NCACHA119.0°120.0°
NCACBHA119.9°120.0°
NCACO1120.2°20.0°
NCACBCG124.0°65.0°
NCACBHB24.0°55.0°
NCACBHB3115.7°175.0°
NCACN168.0°160.0°
HNCAC33.1°120.0°
HNCACB81.6°120.0°
HNCAHA160.3°0.1°
CCACBHA127.4°120.0°
CACO1N1170.3°180.0°
CCACBCG123.3°175.0°
CCACBHB2116.7°65.0°
CCACBHB33.1°55.0°
CACN1CA1162.2°180.0°
CACN1H117.7°0.1°
CCANC1146.9°59.9°
CBCACO13.5°100.0°
CACBCGHB2120.0°120.0°
CACBCGHB3120.3°120.0°
CACBHB2HB3120.3°119.9°
CACBCGCD170.8°180.0°
CACBCGHG250.9°60.0°
CACBCGHG370.2°60.0°
CBCANC198.4°60.1°
CBCACN1168.3°80.0°
HACACO1120.8°140.0°
HACACBCG4.1°55.0°
HACACBHB2115.9°175.0°
HACACBHB3124.4°65.0°
HACANC119.7°180.0°
HACACN150.9°40.0°
O1CN1CA126.0°0.1°
O1CN1H1154.0°180.0°
CGCBHB2HB3120.3°120.0°
CBCGCDHG2120.0°120.0°
CBCGCDHG3118.9°119.9°
CBCGHG2HG3119.0°120.0°
CBCGCDCE166.4°180.0°
CBCGCDHD246.4°60.0°
CBCGCDHD374.9°60.0°
HB2CBCGCD69.2°60.0°
HB2CBCGHG2170.9°180.0°
HB2CBCGHG349.8°60.0°
HB3CBCGCD50.6°60.0°
HB3CBCGHG269.4°60.0°
HB3CBCGHG3169.5°180.0°
CDCGHG2HG3119.0°120.0°
CGCDCEHD2120.0°120.0°
CGCDCEHD3118.7°120.0°
CGCDHD2HD3118.8°120.0°
CGCDCENZ75.9°180.0°
CGCDCEHE2164.1°60.0°
CGCDCEHE343.0°60.0°
HG2CGCDCE73.6°60.0°
HG2CGCDHD2166.4°180.0°
HG2CGCDHD345.1°60.0°
HG3CGCDCE47.5°60.0°
HG3CGCDHD272.5°60.0°
HG3CGCDHD3166.2°179.9°
CECDHD2HD3118.8°120.1°
CDCENZHE2120.0°120.0°
CDCENZHE3118.9°120.0°
CDCEHE2HE3118.9°120.0°
CDCENZHZ1105.2°60.0°
CDCENZHZ214.8°60.0°
CDCENZHZ3134.8°180.0°
HD2CDCENZ44.2°60.0°
HD2CDCEHE275.8°180.0°
HD2CDCEHE3163.0°60.0°
HD3CDCENZ165.4°60.0°
HD3CDCEHE245.4°60.0°
HD3CDCEHE375.7°180.0°
NZCEHE2HE3119.0°120.0°
CENZHZ1HZ2120.0°120.0°
CENZHZ1HZ3120.0°120.0°
CENZHZ2HZ3120.0°120.0°
HE2CENZHZ1134.8°180.0°
HE2CENZHZ2105.2°60.0°
HE2CENZHZ314.8°60.0°
HE3CENZHZ113.7°60.0°
HE3CENZHZ2133.6°180.0°
HE3CENZHZ3106.4°60.0°
HZ1NZHZ2HZ3120.0°120.0°
CA1N1H1C180.0°179.9°
N1CA1C3CB1114.8°120.0°
N1CA1C3HA1122.8°120.0°
N1CA1CB1HA1123.3°120.1°
N1CA1C3O266.9°0.0°
N1CA1CB1CG1112.0°65.0°
N1CA1CB1HB218.0°54.9°
N1CA1CB1HB31129.3°174.9°
N1CA1C3N11121.7°180.0°
H1N1CA1C362.6°25.0°
H1N1CA1CB162.6°95.0°
H1N1CA1HA1174.4°145.0°
C3CA1CB1HA1111.8°120.0°
CA1C3O2N11169.3°180.0°
C3CA1CB1CG1123.1°175.0°
C3CA1CB1HB21116.9°65.0°
C3CA1CB1HB314.3°55.0°
CA1C3N11C11163.8°175.4°
CA1C3N11HN1116.1°4.6°
C3CA1N1C117.4°155.0°
CB1CA1C3O2178.3°120.0°
CA1CB1CG1HB21120.0°120.0°
CA1CB1CG1HB31118.8°120.0°
CA1CB1HB21HB31118.8°120.0°
CA1CB1CG1CD163.9°90.0°
CA1CB1CG1CD2114.8°90.3°
CB1CA1N1C117.4°85.1°
CB1CA1C3N116.9°60.0°
HA1CA1C3O255.9°120.0°
HA1CA1CB1CG111.3°55.0°
HA1CA1CB1HB21131.3°175.0°
HA1CA1CB1HB31107.5°65.0°
HA1CA1N1C5.6°35.0°
HA1CA1C3N11115.5°60.0°
O2C3N11C1125.9°4.6°
O2C3N11HN11154.2°175.4°
CG1CB1HB21HB31118.8°120.0°
CB1CG1CD1CD2178.6°179.6°
CB1CG1CD1CE1178.7°180.0°
CB1CG1CD1HD11.2°0.1°
CB1CG1CD2CE2178.5°180.0°
CB1CG1CD2HD211.5°0.1°
HB21CB1CG1CD156.1°30.0°
HB21CB1CG1CD2125.2°149.7°
HB31CB1CG1CD1177.4°149.9°
HB31CB1CG1CD24.0°29.7°
CG1CD1CE1HD1180.0°179.9°
CD1CG1CD2CE20.1°0.4°
CD1CG1CD2HD21179.9°179.7°
CG1CD1CE1CZ0.1°0.0°
CG1CD1CE1HE1179.9°179.9°
CD2CG1CD1CE10.1°0.3°
CD2CG1CD1HD1179.8°179.8°
CG1CD2CE2HD21180.0°179.9°
CG1CD2CE2CZ0.4°0.1°
CG1CD2CE2HE21179.6°180.0°
CD1CE1CZHE1180.0°179.9°
CD1CE1CZCE20.1°0.2°
CD1CE1CZHZ179.9°180.0°
HD1CD1CE1CZ179.8°179.9°
HD1CD1CE1HE10.1°0.0°
CD2CE2CZCE10.4°0.2°
CD2CE2CZHE21180.0°179.9°
CD2CE2CZHZ179.6°180.0°
HD21CD2CE2CZ179.6°180.0°
HD21CD2CE2HE210.4°0.1°
CE1CZCE2HZ180.0°179.8°
CE1CZCE2HE21179.6°179.7°
HE1CE1CZCE2179.9°179.8°
HE1CE1CZHZ0.2°0.0°
HE21CE2CZHZ0.4°0.1°
N11C11C21C6169.0°179.8°
C11N11HN11C3180.0°180.0°
N11C11C21C31167.9°180.0°
N11C11C21H212.1°0.0°
N11C11C6C5168.2°179.7°
N11C11C6H611.8°0.0°
C21C11N11HN11141.7°144.9°
C11C21C31H2180.0°180.0°
C11C21C31C40.5°0.0°
C11C21C31H3179.5°180.0°
C21C11C6C51.0°0.5°
C21C11C6H6179.0°179.7°
C21C11N11C338.2°35.1°
C6C11N11HN1127.4°34.8°
C6C11C21C311.1°0.2°
C6C11C21H2178.8°179.8°
C11C6C5C40.2°0.5°
C11C6C5H6180.0°179.8°
C11C6C5H5179.9°179.7°
C6C11N11C3152.7°145.2°
C21C31C4H3180.0°180.0°
C21C31C4C50.4°0.0°
C21C31C4C1'177.8°180.0°
H2C21C31C4179.5°180.0°
H2C21C31H30.5°0.0°
C31C4C5C1'178.1°179.9°
C31C4C5C60.5°0.3°
C31C4C5H5179.5°180.0°
C31C4C1'C2'57.0°120.0°
C31C4C1'C3'178.0°120.0°
C31C4C1'H1'62.0°0.1°
H3C31C4C5179.6°180.0°
H3C31C4C1'2.2°0.0°
C4C5C6H5180.0°179.7°
C4C5C6H6179.8°179.7°
C5C4C1'C2'121.1°60.0°
C5C4C1'C3'3.9°59.9°
C5C4C1'H1'119.9°180.0°
C1'C4C5C6177.6°179.7°
C1'C4C5H52.4°0.0°
C4C1'C2'C3'123.8°120.0°
C4C1'C2'H1'120.4°120.0°
C4C1'C3'H1'120.1°120.1°
C4C1'C2'H2'1176.9°60.0°
C4C1'C2'H2'263.1°60.0°
C4C1'C2'H2'356.9°180.0°
C4C1'C3'H3'131.1°60.0°
C4C1'C3'H3'288.9°180.0°
C4C1'C3'H3'3151.1°60.0°
H5C5C6H60.2°0.0°
C2'C1'C3'H1'118.6°120.0°
C1'C2'H2'1H2'2120.0°120.0°
C1'C2'H2'1H2'3120.0°120.0°
C1'C2'H2'2H2'3120.0°120.1°
C2'C1'C3'H3'1152.5°180.0°
C2'C1'C3'H3'232.5°60.0°
C2'C1'C3'H3'387.6°60.0°
C3'C1'C2'H2'159.3°180.0°
C3'C1'C2'H2'260.7°60.0°
C3'C1'C2'H2'3179.3°60.0°
C1'C3'H3'1H3'2120.0°120.0°
C1'C3'H3'1H3'3120.0°120.1°
C1'C3'H3'2H3'3120.0°120.1°
H1'C1'C2'H2'156.6°60.0°
H1'C1'C2'H2'2176.5°180.0°
H1'C1'C2'H2'363.4°60.0°
H1'C1'C3'H3'188.9°60.0°
H1'C1'C3'H3'2151.1°59.9°
H1'C1'C3'H3'331.0°180.0°
H2'1C2'H2'2H2'3120.0°119.9°
H3'1C3'H3'2H3'3120.0°119.9°

246704

PDB entries from 2025-12-24

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