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PRD_000365

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.58Å
C1Odoub1.21Å1.24Å
C2F1sing1.40Å1.33Å
C2F2sing1.40Å1.34Å
C2F3sing1.40Å1.33Å
NCAsing1.46Å1.45Å
NHsing0.97Å1.00Å
CACsing1.51Å1.54Å
CACBsing1.53Å1.54Å
CAHAsing1.09Å1.10Å
CO1doub1.21Å1.22Å
CBCGsing1.53Å1.52Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
CGCDsing1.53Å1.53Å
CGHG2sing1.09Å1.10Å
CGHG3sing1.09Å1.10Å
CDCEsing1.53Å1.53Å
CDHD2sing1.09Å1.10Å
CDHD3sing1.09Å1.10Å
CENZsing1.47Å1.45Å
CEHE2sing1.09Å1.10Å
CEHE3sing1.09Å1.10Å
NZHZ1sing1.01Å1.00Å
NZHZ2sing1.01Å1.00Å
NZHZ3sing1.01Å1.00Å
N1CA1sing1.47Å1.47Å
N1CD1sing1.47Å1.46Å
CA1C3sing1.51Å1.54Å
CA1CB1sing1.54Å1.53Å
CA1HA1sing1.09Å1.10Å
C3O2doub1.21Å1.25Å
CB1CG1sing1.55Å1.52Å
CB1HB21sing1.09Å1.10Å
CB1HB31sing1.09Å1.10Å
CG1CD1sing1.55Å1.53Å
CG1HG21sing1.09Å1.10Å
CG1HG31sing1.09Å1.10Å
CD1HD21sing1.09Å1.10Å
CD1HD31sing1.09Å1.10Å
C11N11sing1.40Å1.36Å
C11C21doub1.39Å1.41ÅAromatic
C11C6sing1.39Å1.40ÅAromatic
N11HN11sing0.97Å1.00Å
C21C31sing1.38Å1.40ÅAromatic
C21H2sing1.08Å1.08Å
C31C4doub1.38Å1.41ÅAromatic
C31H3sing1.08Å1.08Å
C4C5sing1.38Å1.40ÅAromatic
C4C1'sing1.51Å1.54Å
C5C6doub1.38Å1.40ÅAromatic
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C1'C2'sing1.53Å1.54Å
C1'C3'sing1.53Å1.49Å
C1'H1'sing1.09Å1.10Å
C2'H2'1sing1.09Å1.10Å
C2'H2'2sing1.09Å1.10Å
C2'H2'3sing1.09Å1.10Å
C3'H3'1sing1.09Å1.10Å
C3'H3'2sing1.09Å1.10Å
C3'H3'3sing1.09Å1.10Å
C1Nsing1.35Å1.35Å
CN1sing1.35Å1.34Å
C3N11sing1.35Å1.36Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O121.7°120.0°
C1C2F1111.5°109.4°
C1C2F2115.9°109.4°
C1C2F3114.1°109.5°
C2C1N118.3°120.0°
OC1N120.0°120.0°
F1C2F2103.8°109.4°
F1C2F3105.2°109.5°
F2C2F3105.3°109.5°
CANH117.1°120.1°
NCAC109.4°109.5°
NCACB104.6°109.5°
NCAHA114.4°109.4°
CANC1125.8°120.0°
HNC1117.1°120.0°
CCACB114.2°109.5°
CCAHA104.9°109.5°
CACO1118.1°120.0°
CACN1124.5°120.0°
CBCAHA109.7°109.5°
CACBCG118.5°109.5°
CACBHB2106.5°109.5°
CACBHB3104.5°109.5°
O1CN1117.3°120.0°
CGCBHB2106.6°109.4°
CGCBHB3104.4°109.4°
CBCGCD113.2°109.5°
CBCGHG2108.3°109.5°
CBCGHG3107.4°109.5°
HB2CBHB3116.9°109.5°
CDCGHG2108.2°109.5°
CDCGHG3107.4°109.4°
CGCDCE107.1°109.5°
CGCDHD2110.3°109.5°
CGCDHD3110.8°109.5°
HG2CGHG3112.4°109.4°
CECDHD2110.3°109.5°
CECDHD3110.8°109.5°
CDCENZ112.0°109.5°
CDCEHE2108.6°109.5°
CDCEHE3108.0°109.5°
HD2CDHD3107.6°109.4°
NZCEHE2108.6°109.4°
NZCEHE3108.1°109.5°
CENZHZ1109.5°109.5°
CENZHZ2109.4°109.5°
CENZHZ3109.5°109.5°
HE2CEHE3111.5°109.5°
HZ1NZHZ2109.5°109.4°
HZ1NZHZ3109.5°109.5°
HZ2NZHZ3109.5°109.5°
CA1N1CD1112.9°108.7°
N1CA1C3112.3°109.9°
N1CA1CB1103.0°107.2°
N1CA1HA1114.2°109.9°
CA1N1C122.8°125.6°
N1CD1CG1103.9°104.7°
N1CD1HD21111.4°110.4°
N1CD1HD31112.6°110.4°
CD1N1C124.2°125.6°
C3CA1CB1115.5°109.9°
C3CA1HA1101.4°109.9°
CA1C3O2123.6°120.0°
CA1C3N11107.5°120.0°
CB1CA1HA1110.9°110.0°
CA1CB1CG1104.8°103.0°
CA1CB1HB21111.1°110.7°
CA1CB1HB31112.1°110.7°
O2C3N11128.8°120.0°
CG1CB1HB21111.1°110.8°
CG1CB1HB31112.1°110.7°
CB1CG1CD1105.1°101.5°
CB1CG1HG21110.9°111.0°
CB1CG1HG31111.9°111.1°
HB21CB1HB31105.9°110.8°
CD1CG1HG21111.0°111.2°
CD1CG1HG31111.9°110.9°
CG1CD1HD21111.4°110.5°
CG1CD1HD31112.6°110.4°
HG21CG1HG31106.2°110.9°
HD21CD1HD31105.2°110.4°
N11C11C21122.4°120.1°
N11C11C6118.7°120.0°
C11N11HN11117.7°120.0°
C11N11C3124.6°120.0°
C21C11C6118.7°119.9°
C11C21C31120.4°119.9°
C11C21H2119.8°120.0°
C11C6C5121.0°119.9°
C11C6H6119.5°120.1°
HN11N11C3117.7°120.0°
C31C21H2119.8°120.0°
C21C31C4120.4°120.1°
C21C31H3119.8°119.9°
C4C31H3119.8°120.0°
C31C4C5119.2°120.1°
C31C4C1'121.3°120.0°
C5C4C1'119.5°119.9°
C4C5C6120.4°120.1°
C4C5H5119.8°120.0°
C4C1'C2'112.7°109.5°
C4C1'C3'106.2°109.5°
C4C1'H1'109.9°109.4°
C6C5H5119.8°119.9°
C5C6H6119.5°120.0°
C2'C1'C3'110.4°109.5°
C2'C1'H1'105.6°109.4°
C1'C2'H2'1109.5°109.4°
C1'C2'H2'2109.4°109.5°
C1'C2'H2'3109.5°109.5°
C3'C1'H1'112.2°109.5°
C1'C3'H3'1109.5°109.5°
C1'C3'H3'2109.5°109.5°
C1'C3'H3'3109.5°109.5°
H2'1C2'H2'2109.5°109.4°
H2'1C2'H2'3109.4°109.5°
H2'2C2'H2'3109.5°109.5°
H3'1C3'H3'2109.4°109.5°
H3'1C3'H3'3109.5°109.4°
H3'2C3'H3'3109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1ON178.3°179.7°
C1C2F1F2125.4°119.9°
C1C2F1F3124.2°120.0°
C1C2F2F3127.1°120.0°
C2C1NCA169.9°180.0°
C2C1NH10.1°0.0°
OC1C2F148.4°0.1°
OC1C2F2166.8°120.0°
OC1C2F370.6°120.0°
OC1NCA11.8°0.3°
OC1NH168.2°179.7°
F1C2F2F3110.3°120.1°
F1C2C1N133.3°179.7°
F2C2C1N14.9°60.3°
F3C2C1N107.7°59.7°
CANHC1180.0°180.0°
NCACCB116.8°120.1°
NCACHA123.2°119.9°
NCACBHA123.1°120.0°
NCACO149.5°20.1°
NCACBCG153.4°65.0°
NCACBHB286.6°55.0°
NCACBHB337.7°175.0°
NCACN1126.9°160.0°
HNCAC130.3°120.0°
HNCACB7.6°120.0°
HNCAHA112.4°0.0°
CCACBHA117.3°120.0°
CACO1N1176.7°180.0°
CCACBCG33.8°175.0°
CCACBHB2153.8°65.1°
CCACBHB381.9°55.0°
CACN1CA1169.4°180.0°
CACN1CD114.4°0.4°
CCANC149.7°60.1°
CBCACO167.2°100.0°
CACBCGHB2120.0°120.0°
CACBCGHB3115.7°120.1°
CACBHB2HB3116.3°120.1°
CACBCGCD122.8°180.0°
CACBCGHG2117.2°60.0°
CACBCGHG34.4°60.0°
CBCANC1172.4°60.0°
CBCACN1116.3°79.9°
HACACO1172.7°140.0°
HACACBCG83.5°55.0°
HACACBHB236.5°174.9°
HACACBHB3160.8°65.0°
HACANC167.6°180.0°
HACACN13.7°40.1°
O1CN1CA114.2°0.0°
O1CN1CD1162.0°179.7°
CGCBHB2HB3116.3°120.0°
CBCGCDHG2120.0°120.1°
CBCGCDHG3118.4°120.0°
CBCGHG2HG3118.5°120.1°
CBCGCDCE162.0°180.0°
CBCGCDHD242.0°59.9°
CBCGCDHD377.1°60.0°
HB2CBCGCD2.8°60.0°
HB2CBCGHG2122.8°180.0°
HB2CBCGHG3115.6°60.0°
HB3CBCGCD121.5°60.0°
HB3CBCGHG21.5°60.0°
HB3CBCGHG3120.1°180.0°
CDCGHG2HG3118.4°119.9°
CGCDCEHD2120.0°120.1°
CGCDCEHD3120.9°120.0°
CGCDHD2HD3121.0°120.0°
CGCDCENZ172.6°180.0°
CGCDCEHE252.6°60.0°
CGCDCEHE368.5°60.0°
HG2CGCDCE78.0°59.9°
HG2CGCDHD2162.0°180.0°
HG2CGCDHD343.0°60.1°
HG3CGCDCE43.6°60.0°
HG3CGCDHD276.4°60.1°
HG3CGCDHD3164.6°180.0°
CECDHD2HD3121.0°120.0°
CDCENZHE2120.0°120.0°
CDCENZHE3118.9°120.0°
CDCEHE2HE3118.9°120.0°
CDCENZHZ1101.5°60.0°
CDCENZHZ218.5°60.0°
CDCENZHZ3138.5°180.0°
HD2CDCENZ67.4°60.0°
HD2CDCEHE2172.6°179.9°
HD2CDCEHE351.6°60.0°
HD3CDCENZ51.7°60.0°
HD3CDCEHE268.3°60.0°
HD3CDCEHE3170.6°180.0°
NZCEHE2HE3119.0°120.0°
CENZHZ1HZ2120.0°120.0°
CENZHZ1HZ3120.0°120.0°
CENZHZ2HZ3120.0°120.0°
HE2CENZHZ1138.5°179.9°
HE2CENZHZ2101.5°60.0°
HE2CENZHZ318.5°60.0°
HE3CENZHZ117.4°60.0°
HE3CENZHZ2137.4°180.0°
HE3CENZHZ3102.6°60.0°
HZ1NZHZ2HZ3120.0°120.0°
CA1N1CD1C176.5°179.7°
N1CA1C3CB1117.7°117.7°
N1CA1C3HA1122.3°121.1°
N1CA1CB1HA1122.6°119.5°
N1CA1C3O285.6°0.1°
N1CA1CB1CG128.9°22.2°
N1CA1CB1HB21148.9°140.6°
N1CA1CB1HB3192.9°96.2°
CA1N1CD1CG14.3°24.4°
CA1N1CD1HD21115.7°94.5°
CA1N1CD1HD31126.4°143.2°
N1CA1C3N1191.6°180.0°
CD1N1CA1C3109.5°120.7°
CD1N1CA1CB115.4°1.3°
CD1N1CA1HA1135.8°118.2°
N1CD1CG1CB122.6°37.3°
N1CD1CG1HD21120.0°118.8°
N1CD1CG1HD31122.1°118.8°
N1CD1CG1HG2197.4°80.8°
N1CD1CG1HG31144.2°155.3°
N1CD1HD21HD31122.3°122.3°
C3CA1CB1HA1114.6°121.2°
CA1C3O2N11176.6°179.9°
C3CA1CB1CG193.9°97.2°
C3CA1CB1HB2126.1°21.2°
C3CA1CB1HB31144.4°144.4°
CA1C3N11C11175.1°174.8°
CA1C3N11HN114.9°5.3°
C3CA1N1C73.9°59.6°
CB1CA1C3O232.1°117.8°
CA1CB1CG1HB21120.0°118.3°
CA1CB1CG1HB31121.8°118.4°
CA1CB1HB21HB31121.9°123.2°
CA1CB1CG1CD132.3°35.6°
CA1CB1CG1HG2187.7°82.6°
CA1CB1CG1HG31154.0°153.6°
CB1CA1N1C161.2°179.0°
CB1CA1C3N11150.7°62.3°
HA1CA1C3O2152.1°121.0°
HA1CA1CB1CG1151.5°141.6°
HA1CA1CB1HB2188.5°100.0°
HA1CA1CB1HB3129.8°23.2°
HA1CA1N1C40.8°61.5°
HA1CA1C3N1130.7°58.9°
O2C3N11C111.9°5.3°
O2C3N11HN11178.0°174.7°
CG1CB1HB21HB31121.9°123.3°
CB1CG1CD1HG21120.0°118.1°
CB1CG1CD1HG31121.7°118.1°
CB1CG1HG21HG31121.8°123.9°
CB1CG1CD1HD2197.4°81.6°
CB1CG1CD1HD31144.6°156.1°
HB21CB1CG1CD1152.3°154.0°
HB21CB1CG1HG2132.3°35.8°
HB21CB1CG1HG3186.0°88.1°
HB31CB1CG1CD189.5°82.7°
HB31CB1CG1HG21150.5°159.1°
HB31CB1CG1HG3132.2°35.2°
CD1CG1HG21HG31121.8°123.9°
CG1CD1HD21HD31122.3°122.3°
CG1CD1N1C179.1°155.9°
HG21CG1CD1HD21142.6°160.4°
HG21CG1CD1HD3124.6°38.0°
HG31CG1CD1HD2124.2°36.5°
HG31CG1CD1HD3193.7°85.9°
HD21CD1N1C60.9°85.2°
HD31CD1N1C57.1°37.1°
N11C11C21C6174.6°179.7°
C11N11HN11C3180.0°180.0°
N11C11C21C31174.0°180.0°
N11C11C21H26.0°0.1°
N11C11C6C5173.8°179.7°
N11C11C6H66.2°0.0°
C21C11N11HN11152.9°33.1°
C11C21C31H2180.0°179.9°
C11C21C31C40.1°0.0°
C11C21C31H3179.9°180.0°
C21C11C6C51.0°0.5°
C21C11C6H6179.0°179.7°
C21C11N11C327.2°146.8°
C6C11N11HN1121.7°146.6°
C6C11C21C310.6°0.3°
C6C11C21H2179.4°179.8°
C11C6C5C40.6°0.6°
C11C6C5H6180.0°179.7°
C11C6C5H5179.4°179.7°
C6C11N11C3158.3°33.4°
C21C31C4H3180.0°180.0°
C21C31C4C50.4°0.0°
C21C31C4C1'178.0°180.0°
H2C21C31C4179.9°179.9°
H2C21C31H30.1°0.0°
C31C4C5C1'178.4°180.0°
C31C4C5C60.0°0.3°
C31C4C5H5179.9°180.0°
C31C4C1'C2'8.9°120.0°
C31C4C1'C3'112.1°120.0°
C31C4C1'H1'126.3°0.0°
H3C31C4C5179.6°179.9°
H3C31C4C1'2.0°0.0°
C4C5C6H5180.0°179.7°
C4C5C6H6179.4°179.7°
C5C4C1'C2'169.5°60.1°
C5C4C1'C3'69.5°60.0°
C5C4C1'H1'52.0°180.0°
C1'C4C5C6178.3°179.7°
C1'C4C5H51.7°0.0°
C4C1'C2'C3'118.5°120.1°
C4C1'C2'H1'120.0°119.9°
C4C1'C3'H1'120.0°120.0°
C4C1'C2'H2'129.0°60.1°
C4C1'C2'H2'291.0°180.0°
C4C1'C2'H2'3149.0°59.9°
C4C1'C3'H3'1143.8°59.9°
C4C1'C3'H3'223.8°180.0°
C4C1'C3'H3'396.2°60.0°
H5C5C6H60.6°0.0°
C2'C1'C3'H1'117.5°120.0°
C1'C2'H2'1H2'2120.0°120.0°
C1'C2'H2'1H2'3120.0°120.0°
C1'C2'H2'2H2'3120.0°120.1°
C2'C1'C3'H3'193.7°180.0°
C2'C1'C3'H3'2146.3°59.9°
C2'C1'C3'H3'326.3°60.0°
C3'C1'C2'H2'189.5°60.0°
C3'C1'C2'H2'2150.5°59.9°
C3'C1'C2'H2'330.5°180.0°
C1'C3'H3'1H3'2120.0°120.1°
C1'C3'H3'1H3'3120.0°120.0°
C1'C3'H3'2H3'3120.0°120.0°
H1'C1'C2'H2'1149.0°180.0°
H1'C1'C2'H2'229.0°60.0°
H1'C1'C2'H2'391.0°60.0°
H1'C1'C3'H3'123.8°60.0°
H1'C1'C3'H3'296.2°60.0°
H1'C1'C3'H3'3143.8°180.0°
H2'1C2'H2'2H2'3120.0°120.0°
H3'1C3'H3'2H3'3120.0°119.9°

222415

PDB entries from 2024-07-10

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