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PRD_000358

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.57Å
C1Odoub1.21Å1.24Å
C2F1sing1.40Å1.32Å
C2F2sing1.40Å1.31Å
C2F3sing1.40Å1.31Å
NCAsing1.46Å1.44Å
NHsing0.97Å1.00Å
CACsing1.51Å1.52Å
CACBsing1.53Å1.51Å
CAHAsing1.09Å1.10Å
CO1doub1.21Å1.22Å
CBCGsing1.53Å1.51Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
CGCD1sing1.53Å1.53Å
CGCD2sing1.53Å1.51Å
CGHGsing1.09Å1.10Å
CD1HD11sing1.09Å1.10Å
CD1HD12sing1.09Å1.10Å
CD1HD13sing1.09Å1.10Å
CD2HD21sing1.09Å1.10Å
CD2HD22sing1.09Å1.10Å
CD2HD23sing1.09Å1.10Å
N1N2sing1.37Å1.56Å
N1C3sing1.47Å1.51Å
N1C1Msing1.47Å1.51Å
N1CA2sing1.47Å1.49Å
N2HN22sing0.97Å1.00Å
C3C11sing1.51Å1.53Å
C3H1sing1.09Å1.10Å
C3H2Asing1.09Å1.10Å
C11C21doub1.38Å1.39ÅAromatic
C11C6sing1.38Å1.41ÅAromatic
C21C31sing1.38Å1.38ÅAromatic
C21H2sing1.08Å1.08Å
C31C4doub1.38Å1.40ÅAromatic
C31H3sing1.08Å1.08Å
C4C5sing1.38Å1.39ÅAromatic
C4H4sing1.08Å1.08Å
C5C6doub1.38Å1.40ÅAromatic
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C1MH1M1sing1.09Å1.10Å
C1MH1M2sing1.09Å1.10Å
C1MH1M3sing1.09Å1.10Å
CA2CA1sing1.51Å1.52Å
CA2HA21sing1.09Å1.10Å
CA2HA22sing1.09Å1.10Å
CA1O2doub1.21Å1.24Å
C12N11sing1.40Å1.34Å
C12C22doub1.39Å1.41ÅAromatic
C12C61sing1.39Å1.39ÅAromatic
N11HN12sing0.97Å1.00Å
C22C32sing1.38Å1.41ÅAromatic
C22H21sing1.08Å1.08Å
C32C41doub1.38Å1.42ÅAromatic
C32H31sing1.08Å1.08Å
C41C51sing1.38Å1.40ÅAromatic
C41C1'sing1.51Å1.55Å
C51C61doub1.38Å1.39ÅAromatic
C51H51sing1.08Å1.08Å
C61H61sing1.08Å1.08Å
C1'C2'sing1.53Å1.54Å
C1'C3'sing1.53Å1.50Å
C1'H1'sing1.09Å1.10Å
C2'H2'1sing1.09Å1.10Å
C2'H2'2sing1.09Å1.10Å
C2'H2'3sing1.09Å1.10Å
C3'H3'1sing1.09Å1.10Å
C3'H3'2sing1.09Å1.10Å
C3'H3'3sing1.09Å1.10Å
C1Nsing1.35Å1.35Å
CN2sing1.35Å1.35Å
CA1N11sing1.35Å1.34Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O121.1°120.0°
C1C2F1116.1°109.5°
C1C2F2114.5°109.5°
C1C2F3111.5°109.5°
C2C1N118.7°120.0°
OC1N120.2°120.0°
F1C2F2103.3°109.4°
F1C2F3105.6°109.5°
F2C2F3104.7°109.5°
CANH118.1°120.0°
NCAC114.2°109.5°
NCACB106.6°109.5°
NCAHA109.2°109.5°
CANC1123.8°120.0°
HNC1118.1°120.0°
CCACB112.0°109.5°
CCAHA103.4°109.5°
CACO1124.1°120.0°
CACN2105.5°120.0°
CBCAHA111.5°109.4°
CACBCG118.0°109.5°
CACBHB2106.7°109.5°
CACBHB3104.8°109.5°
O1CN2130.3°120.0°
CGCBHB2106.7°109.5°
CGCBHB3104.7°109.5°
CBCGCD1112.3°109.5°
CBCGCD2106.4°109.5°
CBCGHG110.4°109.5°
HB2CBHB3116.4°109.5°
CD1CGCD2111.4°109.5°
CD1CGHG105.2°109.5°
CGCD1HD11109.5°109.5°
CGCD1HD12109.4°109.5°
CGCD1HD13109.5°109.5°
CD2CGHG111.3°109.5°
CGCD2HD21109.5°109.5°
CGCD2HD22109.4°109.5°
CGCD2HD23109.4°109.4°
HD11CD1HD12109.4°109.5°
HD11CD1HD13109.5°109.4°
HD12CD1HD13109.5°109.5°
HD21CD2HD22109.4°109.5°
HD21CD2HD23109.4°109.4°
HD22CD2HD23109.5°109.5°
N2N1C3105.2°109.5°
N2N1C1M95.3°109.5°
N2N1CA2117.3°109.4°
N1N2HN22118.2°120.0°
N1N2C123.7°120.0°
C3N1C1M113.5°109.5°
C3N1CA2113.3°109.5°
N1C3C11118.4°109.5°
N1C3H1106.6°109.5°
N1C3H2A104.5°109.5°
C1MN1CA2111.0°109.5°
N1C1MH1M1109.5°109.5°
N1C1MH1M2109.5°109.5°
N1C1MH1M3109.5°109.5°
N1CA2CA1118.4°109.5°
N1CA2HA21106.6°109.5°
N1CA2HA22104.5°109.5°
HN22N2C118.1°120.0°
C11C3H1106.6°109.5°
C11C3H2A104.5°109.5°
C3C11C21119.1°119.9°
C3C11C6121.6°120.0°
H1C3H2A116.8°109.4°
C21C11C6119.2°120.0°
C11C21C31118.9°120.0°
C11C21H2120.5°120.0°
C11C6C5121.2°120.0°
C11C6H6119.4°120.0°
C31C21H2120.5°120.0°
C21C31C4122.2°120.0°
C21C31H3118.9°120.0°
C4C31H3118.9°120.0°
C31C4C5119.6°120.0°
C31C4H4120.2°119.9°
C5C4H4120.2°120.0°
C4C5C6118.9°120.0°
C4C5H5120.5°120.0°
C6C5H5120.6°120.1°
C5C6H6119.4°120.0°
H1M1C1MH1M2109.5°109.4°
H1M1C1MH1M3109.4°109.4°
H1M2C1MH1M3109.5°109.5°
CA1CA2HA21106.6°109.5°
CA1CA2HA22104.5°109.5°
CA2CA1O2125.2°119.9°
CA2CA1N11102.5°120.0°
HA21CA2HA22116.8°109.4°
O2CA1N11132.4°120.1°
N11C12C22123.5°120.0°
N11C12C61116.9°120.1°
C12N11HN12118.8°120.0°
C12N11CA1122.6°119.9°
C22C12C61119.6°119.9°
C12C22C32119.7°119.9°
C12C22H21120.2°120.0°
C12C61C51120.8°119.9°
C12C61H61119.6°120.1°
HN12N11CA1118.7°120.0°
C32C22H21120.1°120.0°
C22C32C41120.6°120.1°
C22C32H31119.7°120.0°
C41C32H31119.7°120.0°
C32C41C51118.5°120.1°
C32C41C1'122.3°119.9°
C51C41C1'119.2°120.0°
C41C51C61120.7°120.1°
C41C51H51119.6°119.9°
C41C1'C2'114.3°109.4°
C41C1'C3'105.5°109.5°
C41C1'H1'108.5°109.5°
C61C51H51119.6°120.0°
C51C61H61119.6°120.0°
C2'C1'C3'107.9°109.5°
C2'C1'H1'106.1°109.5°
C1'C2'H2'1109.5°109.4°
C1'C2'H2'2109.4°109.4°
C1'C2'H2'3109.5°109.4°
C3'C1'H1'114.8°109.5°
C1'C3'H3'1109.5°109.5°
C1'C3'H3'2109.5°109.5°
C1'C3'H3'3109.4°109.5°
H2'1C2'H2'2109.5°109.5°
H2'1C2'H2'3109.5°109.5°
H2'2C2'H2'3109.5°109.5°
H3'1C3'H3'2109.4°109.5°
H3'1C3'H3'3109.5°109.4°
H3'2C3'H3'3109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1ON179.6°179.8°
C1C2F1F2126.2°120.0°
C1C2F1F3124.1°120.0°
C1C2F2F3122.5°120.0°
C2C1NCA152.5°180.0°
C2C1NH27.5°0.0°
OC1C2F1175.8°0.0°
OC1C2F255.5°120.0°
OC1C2F363.2°120.0°
OC1NCA27.1°0.2°
OC1NH153.0°179.7°
F1C2F2F3110.3°120.0°
F1C2C1N4.6°179.8°
F2C2C1N124.9°60.3°
F3C2C1N116.4°59.7°
CANHC1180.0°180.0°
NCACCB121.3°120.0°
NCACHA118.5°120.0°
NCACBHA119.0°120.0°
NCACO148.5°0.0°
NCACBCG146.6°65.0°
NCACBHB226.6°55.0°
NCACBHB397.4°175.0°
NCACN2127.8°180.0°
HNCAC139.3°25.0°
HNCACB15.0°95.0°
HNCAHA105.6°145.1°
CCACBHA115.3°120.0°
CACO1N2175.2°180.0°
CCACBCG87.7°175.0°
CCACBHB2152.3°65.0°
CCACBHB328.2°55.0°
CACN2N1170.9°180.0°
CACN2HN229.1°0.0°
CCANC140.7°155.0°
CBCACO172.9°120.0°
CACBCGHB2120.0°120.0°
CACBCGHB3116.0°120.0°
CACBHB2HB3116.5°120.0°
CACBCGCD147.8°175.0°
CACBCGCD2169.9°65.0°
CACBCGHG69.3°55.0°
CBCANC1165.0°85.0°
CBCACN2110.9°60.0°
HACACO1167.0°120.1°
HACACBCG27.6°55.0°
HACACBHB292.4°175.0°
HACACBHB3143.6°65.0°
HACANC174.4°35.0°
HACACN29.3°59.9°
O1CN2N15.0°0.0°
O1CN2HN22175.0°180.0°
CGCBHB2HB3116.4°120.0°
CBCGCD1CD2119.2°120.0°
CBCGCD1HG120.1°120.0°
CBCGCD2HG120.2°120.0°
CBCGCD1HD1195.8°60.0°
CBCGCD1HD1224.1°180.0°
CBCGCD1HD13144.1°60.0°
CBCGCD2HD21178.7°60.1°
CBCGCD2HD2261.3°60.0°
CBCGCD2HD2358.7°180.0°
HB2CBCGCD172.2°55.0°
HB2CBCGCD249.9°175.0°
HB2CBCGHG170.7°65.1°
HB3CBCGCD1163.8°65.0°
HB3CBCGCD274.1°55.0°
HB3CBCGHG46.7°175.0°
CD1CGCD2HG117.1°120.0°
CGCD1HD11HD12120.0°120.0°
CGCD1HD11HD13120.0°120.0°
CGCD1HD12HD13120.0°120.0°
CD1CGCD2HD2158.6°59.9°
CD1CGCD2HD2261.4°180.0°
CD1CGCD2HD23178.6°60.0°
CD2CGCD1HD11145.0°60.0°
CD2CGCD1HD1295.0°60.0°
CD2CGCD1HD1325.0°180.0°
CGCD2HD21HD22120.0°120.1°
CGCD2HD21HD23120.0°119.9°
CGCD2HD22HD23120.0°120.0°
HGCGCD1HD1124.3°180.0°
HGCGCD1HD12144.2°60.0°
HGCGCD1HD1395.8°60.1°
HGCGCD2HD2158.5°179.9°
HGCGCD2HD22178.5°60.0°
HGCGCD2HD2361.5°60.0°
HD11CD1HD12HD13120.0°120.0°
HD21CD2HD22HD23120.0°120.0°
N2N1C3C1M102.8°120.0°
N2N1C3CA2129.4°120.0°
N2N1C1MCA2121.9°120.0°
N1N2HN22C180.0°179.9°
N2N1C3C11177.6°56.8°
N2N1C3H162.4°63.3°
N2N1C3H2A61.8°176.8°
N2N1C1MH1M1113.1°54.0°
N2N1C1MH1M27.0°174.0°
N2N1C1MH1M3127.0°66.0°
N2N1CA2CA147.7°54.8°
N2N1CA2HA2172.3°65.3°
N2N1CA2HA22163.5°174.7°
C3N1C1MCA2129.0°120.0°
C3N1N2HN22103.9°120.0°
N1C3C11H1120.0°120.0°
N1C3C11H2A115.7°120.0°
N1C3H1H2A116.3°120.0°
N1C3C11C21125.0°90.0°
N1C3C11C658.1°90.2°
C3N1C1MH1M14.0°174.0°
C3N1C1MH1M2116.0°66.0°
C3N1C1MH1M3124.0°54.1°
C3N1CA2CA1170.7°174.8°
C3N1CA2HA2150.7°54.7°
C3N1CA2HA2273.6°65.3°
C3N1N2C76.1°60.0°
C1MN1N2HN2212.2°120.0°
C1MN1C3C1174.7°176.8°
C1MN1C3H1165.3°56.8°
C1MN1C3H2A41.0°63.2°
N1C1MH1M1H1M2120.0°120.0°
N1C1MH1M1H1M3120.0°120.0°
N1C1MH1M2H1M3120.0°120.0°
C1MN1CA2CA160.3°65.2°
C1MN1CA2HA21179.7°174.7°
C1MN1CA2HA2255.5°54.8°
C1MN1N2C167.8°60.1°
CA2N1N2HN22129.1°0.0°
CA2N1C3C1153.0°63.2°
CA2N1C3H167.0°176.8°
CA2N1C3H2A168.8°56.8°
CA2N1C1MH1M1125.0°65.9°
CA2N1C1MH1M2115.0°54.0°
CA2N1C1MH1M35.0°174.1°
N1CA2CA1HA21120.0°120.1°
N1CA2CA1HA22115.8°120.0°
N1CA2HA21HA22116.3°120.0°
N1CA2CA1O265.1°7.0°
CA2N1N2C50.9°180.0°
N1CA2CA1N11113.3°173.1°
C11C3H1H2A116.3°120.0°
C3C11C21C6177.0°179.7°
C3C11C21C31176.6°180.0°
C3C11C21H23.4°0.0°
C3C11C6C5176.7°179.8°
C3C11C6H63.3°0.0°
H1C3C11C215.0°30.0°
H1C3C11C6178.1°149.7°
H2AC3C11C21119.2°150.0°
H2AC3C11C657.6°29.7°
C11C21C31H2180.0°179.9°
C11C21C31C40.2°0.0°
C11C21C31H3179.8°179.9°
C21C11C6C50.2°0.4°
C21C11C6H6179.8°179.7°
C6C11C21C310.4°0.3°
C6C11C21H2179.7°179.8°
C11C6C5C40.1°0.4°
C11C6C5H6180.0°179.9°
C11C6C5H5179.9°179.7°
C21C31C4H3180.0°179.9°
C21C31C4C50.1°0.1°
C21C31C4H4179.9°180.0°
H2C21C31C4179.8°180.0°
H2C21C31H30.2°0.0°
C31C4C5H4180.0°179.9°
C31C4C5C60.2°0.1°
C31C4C5H5179.8°180.0°
H3C31C4C5179.9°180.0°
H3C31C4H40.1°0.1°
C4C5C6H5180.0°179.9°
C4C5C6H6179.9°179.8°
H4C4C5C6179.8°179.8°
H4C4C5H50.2°0.1°
H5C5C6H60.1°0.1°
H1M1C1MH1M2H1M3120.0°119.9°
CA1CA2HA21HA22116.3°120.0°
CA2CA1O2N11177.8°179.9°
CA2CA1N11C12169.4°175.3°
CA2CA1N11HN1210.7°4.8°
HA21CA2CA1O2174.9°113.1°
HA21CA2CA1N116.7°66.8°
HA22CA2CA1O250.7°127.0°
HA22CA2CA1N11131.0°53.1°
O2CA1N11C1212.5°4.6°
O2CA1N11HN12167.5°175.3°
N11C12C22C61179.1°179.7°
C12N11HN12CA1180.0°180.0°
N11C12C22C32178.8°180.0°
N11C12C22H211.2°0.1°
N11C12C61C51178.4°179.7°
N11C12C61H611.6°0.0°
C22C12N11HN12137.8°35.8°
C12C22C32H21180.0°179.9°
C12C22C32C410.0°0.0°
C12C22C32H31179.9°180.0°
C22C12C61C510.8°0.5°
C22C12C61H61179.3°179.7°
C22C12N11CA142.2°144.2°
C61C12N11HN1241.4°143.9°
C61C12C22C320.3°0.3°
C61C12C22H21179.7°179.9°
C12C61C51C410.9°0.5°
C12C61C51H61180.0°179.8°
C12C61C51H51179.1°179.7°
C61C12N11CA1138.7°36.1°
C22C32C41H31180.0°180.0°
C22C32C41C510.1°0.0°
C22C32C41C1'179.5°180.0°
H21C22C32C41180.0°179.9°
H21C22C32H310.1°0.1°
C32C41C51C1'179.4°180.0°
C32C41C51C610.6°0.2°
C32C41C51H51179.4°180.0°
C32C41C1'C2'13.5°120.0°
C32C41C1'C3'131.8°120.0°
C32C41C1'H1'104.6°0.0°
H31C32C41C51179.9°180.0°
H31C32C41C1'0.5°0.0°
C41C51C61H51180.0°179.8°
C41C51C61H61179.1°179.7°
C51C41C1'C2'167.0°60.0°
C51C41C1'C3'48.7°60.0°
C51C41C1'H1'74.8°180.0°
C1'C41C51C61180.0°179.7°
C1'C41C51H510.0°0.1°
C41C1'C2'C3'117.0°120.0°
C41C1'C2'H1'119.5°120.0°
C41C1'C3'H1'119.4°120.0°
C41C1'C2'H2'123.5°60.0°
C41C1'C2'H2'296.5°180.0°
C41C1'C2'H2'3143.4°60.0°
C41C1'C3'H3'1142.1°60.0°
C41C1'C3'H3'222.2°179.9°
C41C1'C3'H3'397.9°60.0°
H51C51C61H610.9°0.1°
C2'C1'C3'H1'118.1°120.0°
C1'C2'H2'1H2'2120.0°119.9°
C1'C2'H2'1H2'3120.0°120.0°
C1'C2'H2'2H2'3120.0°120.0°
C2'C1'C3'H3'195.3°180.0°
C2'C1'C3'H3'2144.7°60.0°
C2'C1'C3'H3'324.6°60.0°
C3'C1'C2'H2'193.5°60.0°
C3'C1'C2'H2'2146.5°60.0°
C3'C1'C2'H2'326.5°180.0°
C1'C3'H3'1H3'2120.0°120.0°
C1'C3'H3'1H3'3120.0°120.0°
C1'C3'H3'2H3'3120.0°120.0°
H1'C1'C2'H2'1143.0°179.9°
H1'C1'C2'H2'223.0°60.0°
H1'C1'C2'H2'397.1°60.0°
H1'C1'C3'H3'122.7°60.0°
H1'C1'C3'H3'297.2°60.0°
H1'C1'C3'H3'3142.7°180.0°
H2'1C2'H2'2H2'3120.0°120.1°
H3'1C3'H3'2H3'3120.0°120.0°

223532

PDB entries from 2024-08-07

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