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PRD_000320

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCAsing1.47Å1.44Å
NHsing1.01Å1.00Å
NH2sing1.01Å1.00Å
CACsing1.51Å1.53Å
CACBsing1.53Å1.51Å
CAHAsing1.09Å1.10Å
COdoub1.21Å1.21Å
CBHB1sing1.09Å1.10Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
N1CA1sing1.47Å1.42Å
N1H1sing0.97Å1.00Å
CA1C1sing1.51Å1.51Å
CA1CB1sing1.53Å1.54Å
CA1HA1sing1.09Å1.10Å
C1O1doub1.21Å1.22Å
CB1HB11sing1.09Å1.10Å
CB1HB21sing1.09Å1.10Å
CB1HB31sing1.09Å1.10Å
N2CA2sing1.46Å1.45Å
N2H3sing0.97Å1.00Å
CA2C2sing1.53Å1.54Å
CA2CB2sing1.53Å1.52Å
CA2HA2sing1.09Å1.10Å
C2OSsing1.43Å1.40Å
C2CMsing1.53Å1.57Å
C2HCsing1.09Å1.10Å
OSHOSsing0.97Å0.95Å
CB2CGsing1.51Å1.53Å
CB2HB12sing1.09Å1.10Å
CB2HB22sing1.09Å1.10Å
CGCD1doub1.38Å1.39ÅAromatic
CGCD2sing1.38Å1.42ÅAromatic
CD1CE1sing1.38Å1.41ÅAromatic
CD1HD1sing1.08Å1.08Å
CD2CE2doub1.38Å1.41ÅAromatic
CD2HD2sing1.08Å1.08Å
CE1CZdoub1.38Å1.39ÅAromatic
CE1HE1sing1.08Å1.08Å
CE2CZsing1.38Å1.39ÅAromatic
CE2HE2sing1.08Å1.08Å
CZHZsing1.08Å1.08Å
CMHM2sing1.09Å1.10Å
CMHM3sing1.09Å1.10Å
CA3C3sing1.51Å1.51Å
CA3HA3sing1.09Å1.10Å
C3O2doub1.21Å1.25Å
N4CA4sing1.46Å1.44Å
N4H5sing0.97Å1.00Å
CA4C4sing1.51Å1.54Å
CA4CB3sing1.53Å1.53Å
CA4HA4sing1.09Å1.10Å
C4O3doub1.21Å1.21Å
CB3CG1sing1.53Å1.52Å
CB3CG2sing1.53Å1.54Å
CB3HBsing1.09Å1.10Å
CG1HG11sing1.09Å1.10Å
CG1HG12sing1.09Å1.10Å
CG1HG13sing1.09Å1.10Å
CG2HG21sing1.09Å1.10Å
CG2HG22sing1.09Å1.10Å
CG2HG23sing1.09Å1.10Å
N5CA5sing1.47Å1.42Å
N5H6sing0.97Å1.00Å
CA5C5sing1.51Å1.54Å
CA5CB4sing1.53Å1.52Å
CA5HA5sing1.09Å1.10Å
C5O4doub1.21Å1.23Å
CB4CG11sing1.53Å1.53Å
CB4CG21sing1.53Å1.53Å
CB4HB4sing1.09Å1.10Å
CG11HG14sing1.09Å1.10Å
CG11HG15sing1.09Å1.10Å
CG11HG16sing1.09Å1.10Å
CG21HG24sing1.09Å1.10Å
CG21HG25sing1.09Å1.10Å
C6O5sing1.45Å1.44Å
C6H22sing1.09Å1.10Å
C6H31sing1.09Å1.10Å
CN1sing1.35Å1.34Å
C1N2sing1.35Å1.36Å
CMCA3sing1.53Å1.53Å
C3N4sing1.35Å1.33Å
C4N5sing1.35Å1.34Å
C5O5sing1.34Å1.42Å
CA3HA31sing1.09Å1.10Å
HG26CG21sing1.09Å1.10Å
H7C6sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CANH109.5°111.0°
CANH2109.5°110.9°
NCAC112.8°109.4°
NCACB114.7°109.5°
NCAHA105.4°109.5°
HNH2109.5°111.0°
CCACB115.3°109.5°
CCAHA104.7°109.4°
CACO127.8°120.0°
CACN1111.8°120.0°
CBCAHA102.2°109.5°
CACBHB1109.5°109.5°
CACBHB2109.5°109.5°
CACBHB3109.5°109.5°
OCN1120.4°120.0°
HB1CBHB2109.5°109.4°
HB1CBHB3109.5°109.5°
HB2CBHB3109.5°109.5°
CA1N1H1115.7°120.0°
N1CA1C1111.8°109.5°
N1CA1CB1107.9°109.5°
N1CA1HA1111.2°109.5°
CA1N1C128.7°120.0°
H1N1C115.7°120.0°
C1CA1CB1115.3°109.5°
C1CA1HA1103.0°109.5°
CA1C1O1126.1°120.0°
CA1C1N2113.9°120.0°
CB1CA1HA1107.4°109.5°
CA1CB1HB11109.5°109.5°
CA1CB1HB21109.5°109.5°
CA1CB1HB31109.4°109.5°
O1C1N2120.0°120.0°
HB11CB1HB21109.5°109.4°
HB11CB1HB31109.4°109.5°
HB21CB1HB31109.5°109.5°
CA2N2H3117.4°120.1°
N2CA2C2107.8°109.4°
N2CA2CB2112.5°109.5°
N2CA2HA2108.9°109.5°
CA2N2C1125.1°120.0°
H3N2C1117.4°119.9°
C2CA2CB2110.5°109.5°
C2CA2HA2111.1°109.5°
CA2C2OS110.2°109.5°
CA2C2CM109.3°109.5°
CA2C2HC108.3°109.4°
CB2CA2HA2106.1°109.5°
CA2CB2CG120.8°109.5°
CA2CB2HB12105.9°109.4°
CA2CB2HB22105.9°109.5°
OSC2CM106.8°109.5°
OSC2HC110.7°109.4°
C2OSHOS109.5°114.0°
CMC2HC111.6°109.5°
C2CMHM2109.5°109.5°
C2CMHM3109.6°109.5°
C2CMCA3109.2°109.5°
CGCB2HB12105.8°109.5°
CGCB2HB22105.9°109.5°
CB2CGCD1123.4°120.0°
CB2CGCD2116.5°120.0°
HB12CB2HB22112.8°109.4°
CD1CGCD2120.2°120.0°
CGCD1CE1121.4°120.0°
CGCD1HD1119.3°120.0°
CGCD2CE2118.3°120.0°
CGCD2HD2120.9°119.9°
CE1CD1HD1119.3°120.0°
CD1CE1CZ118.0°120.0°
CD1CE1HE1121.0°120.0°
CE2CD2HD2120.8°120.1°
CD2CE2CZ120.5°120.0°
CD2CE2HE2119.8°120.0°
CZCE1HE1121.0°120.1°
CE1CZCE2121.6°120.1°
CE1CZHZ119.2°120.0°
CZCE2HE2119.8°120.0°
CE2CZHZ119.2°120.0°
HM2CMHM3109.4°109.5°
HM2CMCA3109.6°109.5°
HM3CMCA3109.6°109.4°
C3CA3HA3108.4°109.4°
CA3C3O2119.6°119.9°
C3CA3CM112.7°109.5°
CA3C3N4119.3°120.0°
C3CA3HA31108.4°109.5°
HA3CA3CM108.4°109.5°
HA3CA3HA31110.6°109.5°
O2C3N4121.2°120.0°
CA4N4H5118.9°120.0°
N4CA4C4108.8°109.5°
N4CA4CB3114.6°109.5°
N4CA4HA4107.3°109.5°
CA4N4C3122.2°120.0°
H5N4C3118.9°120.0°
C4CA4CB3112.0°109.4°
C4CA4HA4110.2°109.4°
CA4C4O3122.2°120.0°
CA4C4N5110.8°120.0°
CB3CA4HA4103.7°109.4°
CA4CB3CG1114.0°109.5°
CA4CB3CG2111.8°109.5°
CA4CB3HB104.4°109.5°
O3C4N5127.0°120.0°
CG1CB3CG2108.8°109.5°
CG1CB3HB107.6°109.5°
CB3CG1HG11109.5°109.5°
CB3CG1HG12109.4°109.5°
CB3CG1HG13109.5°109.5°
CG2CB3HB110.1°109.4°
CB3CG2HG21109.5°109.4°
CB3CG2HG22109.5°109.5°
CB3CG2HG23109.5°109.5°
HG11CG1HG12109.4°109.4°
HG11CG1HG13109.5°109.5°
HG12CG1HG13109.5°109.5°
HG21CG2HG22109.5°109.5°
HG21CG2HG23109.4°109.5°
HG22CG2HG23109.5°109.5°
CA5N5H6115.4°120.0°
N5CA5C5109.2°109.5°
N5CA5CB4115.5°109.5°
N5CA5HA5106.4°109.4°
CA5N5C4129.1°120.0°
H6N5C4115.4°120.1°
C5CA5CB4112.0°109.5°
C5CA5HA5110.2°109.5°
CA5C5O4121.8°120.0°
CA5C5O5115.6°120.0°
CB4CA5HA5103.2°109.5°
CA5CB4CG11116.6°109.5°
CA5CB4CG21112.9°109.5°
CA5CB4HB4101.9°109.4°
O4C5O5122.7°120.0°
CG11CB4CG21110.2°109.5°
CG11CB4HB4105.0°109.5°
CB4CG11HG14109.5°109.5°
CB4CG11HG15109.4°109.5°
CB4CG11HG16109.5°109.5°
CG21CB4HB4109.4°109.5°
CB4CG21HG24109.5°109.5°
CB4CG21HG25109.4°109.5°
CB4CG21HG26109.5°109.5°
HG14CG11HG15109.5°109.4°
HG14CG11HG16109.4°109.5°
HG15CG11HG16109.5°109.4°
HG24CG21HG25109.5°109.4°
HG24CG21HG26109.5°109.4°
HG25CG21HG26109.5°109.5°
O5C6H22109.5°109.5°
O5C6H31109.5°109.5°
C6O5C5108.5°117.0°
O5C6H7109.5°109.5°
H22C6H31109.4°109.5°
H22C6H7109.5°109.5°
H31C6H7109.5°109.5°
CMCA3HA31108.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CANHH2120.0°123.8°
NCACCB134.4°120.0°
NCACHA114.1°119.9°
NCACBHA113.5°120.0°
NCACO54.7°20.0°
NCACBHB1180.0°60.0°
NCACBHB260.0°180.0°
NCACBHB360.0°60.0°
NCACN1124.8°160.0°
HNCAC180.0°60.1°
HNCACB45.3°60.0°
HNCAHA66.4°180.0°
H2NCAC60.0°176.1°
H2NCACB165.3°63.9°
H2NCAHA53.6°56.2°
CCACBHA112.9°120.0°
CACON1179.4°180.0°
CCACBHB146.4°60.0°
CCACBHB2166.4°60.0°
CCACBHB373.6°180.0°
CACN1CA1179.5°180.0°
CACN1H10.5°0.0°
CBCACO79.7°100.0°
CACBHB1HB2120.0°120.0°
CACBHB1HB3120.0°120.0°
CACBHB2HB3120.0°120.1°
CBCACN1100.8°80.0°
HACACO168.8°140.0°
HACACBHB166.5°180.0°
HACACBHB253.5°60.0°
HACACBHB3173.5°60.1°
HACACN110.7°40.0°
OCN1CA10.0°0.0°
OCN1H1180.0°180.0°
HB1CBHB2HB3120.0°120.0°
CA1N1H1C180.0°180.0°
N1CA1C1CB1123.8°120.0°
N1CA1C1HA1119.5°120.0°
N1CA1CB1HA1120.0°120.0°
N1CA1C1O163.1°0.0°
N1CA1CB1HB11180.0°60.0°
N1CA1CB1HB2160.0°180.0°
N1CA1CB1HB3160.0°60.0°
N1CA1C1N2118.7°180.0°
H1N1CA1C1127.3°25.0°
H1N1CA1CB10.5°95.0°
H1N1CA1HA1118.1°145.0°
C1CA1CB1HA1114.2°120.1°
CA1C1O1N2178.2°180.0°
C1CA1CB1HB1154.2°59.9°
C1CA1CB1HB21174.2°60.0°
C1CA1CB1HB3165.8°180.0°
CA1C1N2CA2177.4°180.0°
CA1C1N2H32.6°0.1°
C1CA1N1C52.6°155.0°
CB1CA1C1O160.7°120.0°
CA1CB1HB11HB21120.0°120.0°
CA1CB1HB11HB31120.0°120.1°
CA1CB1HB21HB31120.0°120.1°
CB1CA1N1C179.5°85.0°
CB1CA1C1N2117.6°60.0°
HA1CA1C1O1177.4°120.0°
HA1CA1CB1HB1160.0°180.0°
HA1CA1CB1HB2160.0°60.1°
HA1CA1CB1HB31180.0°60.0°
HA1CA1N1C62.0°35.0°
HA1CA1C1N20.9°60.0°
O1C1N2CA21.0°0.0°
O1C1N2H3179.0°180.0°
HB11CB1HB21HB31120.0°120.0°
CA2N2H3C1180.0°180.0°
N2CA2C2CB2123.3°120.0°
N2CA2C2HA2119.2°120.0°
N2CA2CB2HA2119.0°120.0°
N2CA2C2OS62.7°60.0°
N2CA2C2CM54.4°60.0°
N2CA2C2HC176.1°180.0°
N2CA2CB2CG51.8°65.0°
N2CA2CB2HB1268.2°55.0°
N2CA2CB2HB22171.8°174.9°
H3N2CA2C257.8°25.0°
H3N2CA2CB264.3°95.1°
H3N2CA2HA2178.4°144.9°
C2CA2CB2HA2120.5°120.0°
CA2C2OSCM118.6°120.0°
CA2C2OSHC119.7°119.9°
CA2C2CMHC119.7°120.0°
CA2C2OSHOS180.0°60.0°
C2CA2CB2CG172.3°175.0°
C2CA2CB2HB1252.3°65.0°
C2CA2CB2HB2267.7°54.9°
CA2C2CMHM292.1°65.0°
CA2C2CMHM327.9°55.1°
C2CA2N2C1122.2°155.0°
CA2C2CMCA3147.9°175.0°
CB2CA2C2OS60.6°60.0°
CB2CA2C2CM177.7°180.0°
CB2CA2C2HC60.5°59.9°
CA2CB2CGHB12120.0°120.0°
CA2CB2CGHB22120.0°120.1°
CA2CB2HB12HB22115.4°119.9°
CA2CB2CGCD170.8°90.0°
CA2CB2CGCD2109.7°90.3°
CB2CA2N2C1115.8°85.0°
HA2CA2C2OS178.1°180.0°
HA2CA2C2CM64.8°60.0°
HA2CA2C2HC56.9°60.1°
HA2CA2CB2CG67.3°55.0°
HA2CA2CB2HB12172.8°175.0°
HA2CA2CB2HB2252.7°65.1°
HA2CA2N2C11.6°35.0°
OSC2CMHC121.1°120.0°
OSC2CMHM227.1°55.0°
OSC2CMHM3147.1°175.1°
OSC2CMCA392.9°65.0°
CMC2OSHOS61.4°60.0°
C2CMHM2HM3120.1°120.0°
C2CMHM2CA3119.8°120.0°
C2CMHM3CA3119.8°120.0°
C2CMCA3C370.0°180.0°
C2CMCA3HA3170.0°60.0°
C2CMCA3HA3150.0°60.0°
HCC2OSHOS60.3°179.9°
HCC2CMHM2148.2°175.0°
HCC2CMHM391.9°64.9°
HCC2CMCA328.2°55.0°
CGCB2HB12HB22115.3°120.0°
CB2CGCD1CD2179.5°179.7°
CB2CGCD1CE1179.4°180.0°
CB2CGCD1HD10.6°0.0°
CB2CGCD2CE2179.4°180.0°
CB2CGCD2HD20.6°0.0°
HB12CB2CGCD1169.2°30.0°
HB12CB2CGCD210.3°149.7°
HB22CB2CGCD149.2°150.0°
HB22CB2CGCD2130.3°29.7°
CGCD1CE1HD1180.0°180.0°
CD1CGCD2CE20.1°0.3°
CD1CGCD2HD2179.9°179.7°
CGCD1CE1CZ0.6°0.0°
CGCD1CE1HE1179.4°180.0°
CD2CGCD1CE10.1°0.3°
CD2CGCD1HD1179.9°179.7°
CGCD2CE2HD2180.0°180.0°
CGCD2CE2CZ0.6°0.1°
CGCD2CE2HE2179.4°180.0°
CD1CE1CZHE1180.0°180.0°
CD1CE1CZCE21.1°0.2°
CD1CE1CZHZ178.9°179.9°
HD1CD1CE1CZ179.4°180.0°
HD1CD1CE1HE10.6°0.0°
CD2CE2CZCE11.2°0.1°
CD2CE2CZHE2180.0°179.9°
CD2CE2CZHZ178.8°180.0°
HD2CD2CE2CZ179.4°179.9°
HD2CD2CE2HE20.6°0.0°
CE1CZCE2HZ180.0°179.9°
CE1CZCE2HE2178.8°179.8°
HE1CE1CZCE2178.9°179.8°
HE1CE1CZHZ1.1°0.1°
HE2CE2CZHZ1.2°0.1°
HM2CMHM3CA3120.1°120.0°
HM2CMCA3C3170.1°60.0°
HM2CMCA3HA350.1°180.0°
HM2CMCA3HA3170.0°60.0°
HM3CMCA3C350.1°60.0°
HM3CMCA3HA369.9°59.9°
HM3CMCA3HA31170.0°180.0°
C3CA3HA3CM122.6°120.0°
C3CA3HA3HA31118.7°119.9°
CA3C3O2N4179.6°180.0°
CA3C3N4CA4178.1°180.0°
CA3C3N4H51.9°0.0°
C3CA3CMHA31120.0°120.0°
HA3CA3C3O260.9°120.1°
HA3CA3CMHA31120.0°120.0°
HA3CA3C3N4119.5°60.0°
O2C3N4CA41.5°0.0°
O2C3N4H5178.5°179.9°
O2C3CA3CM59.1°0.1°
O2C3CA3HA31179.0°120.0°
CA4N4H5C3180.0°180.0°
N4CA4C4CB3127.7°120.0°
N4CA4C4HA4117.4°120.1°
N4CA4CB3HA4116.6°120.1°
N4CA4C4O347.8°22.1°
N4CA4CB3CG1141.7°65.6°
N4CA4CB3CG217.8°54.3°
N4CA4CB3HB101.1°174.3°
N4CA4C4N5133.9°157.9°
H5N4CA4C466.7°25.0°
H5N4CA4CB359.6°95.0°
H5N4CA4HA4174.1°145.0°
C4CA4CB3HA4118.8°119.9°
CA4C4O3N5178.0°179.9°
C4CA4CB3CG193.7°174.4°
C4CA4CB3CG2142.4°65.7°
C4CA4CB3HB23.4°54.3°
CA4C4N5CA5179.3°175.3°
CA4C4N5H60.7°4.7°
C4CA4N4C3113.3°155.0°
CB3CA4C4O379.9°98.0°
CA4CB3CG1CG2125.5°120.0°
CA4CB3CG1HB115.2°120.1°
CA4CB3CG2HB115.5°120.1°
CA4CB3CG1HG11180.0°60.0°
CA4CB3CG1HG1260.0°179.9°
CA4CB3CG1HG1360.0°60.0°
CA4CB3CG2HG21180.0°64.6°
CA4CB3CG2HG2260.0°175.4°
CA4CB3CG2HG2360.0°55.4°
CB3CA4N4C3120.4°85.0°
CB3CA4C4N598.3°82.1°
HA4CA4C4O3165.2°142.1°
HA4CA4CB3CG125.1°54.4°
HA4CA4CB3CG298.8°174.4°
HA4CA4CB3HB142.3°65.6°
HA4CA4N4C35.9°35.0°
HA4CA4C4N516.6°37.8°
O3C4N5CA51.1°4.6°
O3C4N5H6178.9°175.4°
CG1CB3CG2HB117.7°119.9°
CB3CG1HG11HG12120.0°120.0°
CB3CG1HG11HG13120.0°120.0°
CB3CG1HG12HG13120.0°120.0°
CG1CB3CG2HG2153.2°175.4°
CG1CB3CG2HG2266.8°55.4°
CG1CB3CG2HG23173.2°64.6°
CG2CB3CG1HG1154.5°60.0°
CG2CB3CG1HG12174.5°60.0°
CG2CB3CG1HG1365.6°180.0°
CB3CG2HG21HG22120.0°120.0°
CB3CG2HG21HG23120.0°119.9°
CB3CG2HG22HG23120.0°120.0°
HBCB3CG1HG1164.7°179.9°
HBCB3CG1HG1255.2°60.0°
HBCB3CG1HG13175.2°60.0°
HBCB3CG2HG2164.5°55.5°
HBCB3CG2HG22175.5°64.5°
HBCB3CG2HG2355.5°175.4°
HG11CG1HG12HG13120.0°120.0°
HG21CG2HG22HG23119.9°120.0°
CA5N5H6C4180.0°180.0°
N5CA5C5CB4129.2°120.0°
N5CA5C5HA5116.5°120.0°
N5CA5CB4HA5115.6°120.0°
N5CA5C5O44.2°0.0°
N5CA5CB4CG1113.5°180.0°
N5CA5CB4CG21142.6°60.0°
N5CA5CB4HB4100.2°60.0°
N5CA5C5O5175.9°180.0°
H6N5CA5C5108.3°25.0°
H6N5CA5CB4124.4°95.0°
H6N5CA5HA510.6°145.0°
C5CA5CB4HA5118.5°120.0°
CA5C5O4O5179.8°180.0°
C5CA5CB4CG11112.4°60.0°
C5CA5CB4CG2116.8°180.0°
C5CA5CB4HB4134.0°60.0°
CA5C5O5C628.1°180.0°
C5CA5N5C471.7°155.0°
CB4CA5C5O4133.5°120.0°
CA5CB4CG11CG21130.4°120.0°
CA5CB4CG11HB4111.9°120.0°
CA5CB4CG21HB4112.7°120.0°
CA5CB4CG11HG14180.0°60.0°
CA5CB4CG11HG1560.0°180.0°
CA5CB4CG11HG1660.0°60.0°
CA5CB4CG21HG24180.0°60.0°
CA5CB4CG21HG2560.0°179.9°
CB4CA5N5C455.6°85.0°
CB4CA5C5O546.7°60.0°
CA5CB4CG21HG2660.0°59.9°
HA5CA5C5O4112.3°120.0°
HA5CA5CB4CG11129.1°60.0°
HA5CA5CB4CG21101.8°60.0°
HA5CA5CB4HB415.4°180.0°
HA5CA5N5C4169.4°35.0°
HA5CA5C5O567.5°60.0°
O4C5O5C6152.1°0.0°
CG11CB4CG21HB4115.0°120.0°
CB4CG11HG14HG15120.0°120.0°
CB4CG11HG14HG16120.0°120.1°
CB4CG11HG15HG16120.0°120.0°
CG11CB4CG21HG2447.7°180.0°
CG11CB4CG21HG2572.3°60.1°
CG11CB4CG21HG26167.7°60.0°
CG21CB4CG11HG1449.6°60.0°
CG21CB4CG11HG15169.6°60.0°
CG21CB4CG11HG1670.4°180.0°
CB4CG21HG24HG25120.0°120.0°
CB4CG21HG24HG26120.0°120.0°
CB4CG21HG25HG26120.0°120.1°
HB4CB4CG11HG1468.2°180.0°
HB4CB4CG11HG1551.9°60.0°
HB4CB4CG11HG16171.9°59.9°
HB4CB4CG21HG2467.3°60.0°
HB4CB4CG21HG25172.7°60.0°
HB4CB4CG21HG2652.7°179.9°
HG14CG11HG15HG16120.0°120.0°
HG24CG21HG25HG26120.0°119.9°
O5C6H22H31120.0°120.0°
O5C6H22H7120.0°120.0°
O5C6H31H7120.0°120.0°
H22C6H31H7120.0°120.0°
H22C6O5C5180.0°60.0°
H31C6O5C560.0°60.0°
CMCA3C3N4120.5°180.0°
N4C3CA3HA310.6°60.0°
C5O5C6H760.0°180.0°

219869

PDB entries from 2024-05-15

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