Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

PRD_000301

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1doub1.21Å1.23Å
C1C2sing1.51Å1.52Å
C2H1sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C2H3sing1.09Å1.10Å
N1C3sing1.46Å1.47Å
N1H4sing0.97Å1.00Å
C3C4sing1.51Å1.51Å
C3C5sing1.53Å1.55Å
C3H5sing1.09Å1.10Å
C4O2doub1.21Å1.22Å
C5C6sing1.53Å1.53Å
C5C7sing1.53Å1.50Å
C5H6sing1.09Å1.10Å
C6C8sing1.53Å1.50Å
C6H7sing1.09Å1.10Å
C6H8sing1.09Å1.10Å
C7H9sing1.09Å1.10Å
C7H10sing1.09Å1.10Å
C7H11sing1.09Å1.10Å
C8H12sing1.09Å1.10Å
C8H13sing1.09Å1.10Å
C8H14sing1.09Å1.10Å
N2C9sing1.47Å1.46Å
N2H15sing0.97Å1.00Å
C9C10sing1.51Å1.53Å
C9C11sing1.53Å1.53Å
C9H16sing1.09Å1.10Å
C10O3doub1.21Å1.25Å
C11C12sing1.53Å1.54Å
C11H17sing1.09Å1.10Å
C11H18sing1.09Å1.10Å
C12C13sing1.51Å1.49Å
C12H19sing1.09Å1.10Å
C12H20sing1.09Å1.10Å
C13O4doub1.21Å1.24Å
C13O5sing1.34Å1.30Å
O5H21sing0.97Å0.95Å
N3C14sing1.47Å1.45Å
N3H22sing0.97Å1.00Å
C14C15sing1.51Å1.52Å
C14C16sing1.53Å1.54Å
C14H23sing1.09Å1.10Å
C15O6doub1.21Å1.22Å
C16O7sing1.43Å1.41Å
C16C17sing1.53Å1.49Å
C16H24sing1.09Å1.10Å
O7H25sing0.97Å0.95Å
C17H26sing1.09Å1.10Å
C17H27sing1.09Å1.10Å
C17H28sing1.09Å1.10Å
C18O8sing1.43Å1.40Å
C18C19sing1.53Å1.50Å
C18H29sing1.09Å1.10Å
C18H30sing1.09Å1.10Å
C19N4sing1.47Å1.46Å
N4H31sing0.97Å1.00Å
O8H32sing0.97Å0.95Å
C20C19sing1.53Å1.56Å
C19H33sing1.09Å1.10Å
C20C21sing1.51Å1.52Å
C20H34sing1.09Å1.10Å
C20H35sing1.09Å1.10Å
C21O10doub1.21Å1.27Å
C21O9sing1.34Å1.24Å
O9H36sing0.97Å0.95Å
C1N1sing1.35Å1.32Å
C15N4sing1.35Å1.33Å
C4N2sing1.35Å1.33Å
C10N3sing1.35Å1.30Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2120.5°120.0°
O1C1N1123.8°120.0°
C1C2H1109.5°109.5°
C1C2H2109.5°109.4°
C1C2H3109.5°109.5°
C2C1N1115.6°120.0°
H1C2H2109.5°109.5°
H1C2H3109.5°109.4°
H2C2H3109.5°109.5°
C3N1H4119.3°120.0°
N1C3C4110.1°109.5°
N1C3C5108.3°109.5°
N1C3H5110.3°109.5°
C3N1C1121.4°120.0°
H4N1C1119.3°120.0°
C4C3C5109.1°109.5°
C4C3H5109.8°109.4°
C3C4O2122.4°120.0°
C3C4N2115.5°120.0°
C5C3H5109.3°109.5°
C3C5C6111.6°109.5°
C3C5C7112.0°109.5°
C3C5H6106.4°109.5°
O2C4N2121.8°120.0°
C6C5C7112.7°109.5°
C6C5H6106.7°109.5°
C5C6C8112.2°109.4°
C5C6H7108.8°109.5°
C5C6H8108.8°109.4°
C7C5H6107.0°109.5°
C5C7H9109.5°109.5°
C5C7H10109.5°109.5°
C5C7H11109.5°109.5°
C8C6H7108.8°109.5°
C8C6H8108.8°109.5°
C6C8H12109.5°109.4°
C6C8H13109.5°109.4°
C6C8H14109.5°109.5°
H7C6H8109.5°109.5°
H9C7H10109.5°109.4°
H9C7H11109.4°109.5°
H10C7H11109.4°109.5°
H12C8H13109.5°109.5°
H12C8H14109.5°109.5°
H13C8H14109.5°109.5°
C9N2H15118.4°120.0°
N2C9C10110.1°109.5°
N2C9C11110.5°109.5°
N2C9H16109.5°109.4°
C9N2C4123.2°120.0°
H15N2C4118.4°120.0°
C10C9C11109.6°109.5°
C10C9H16108.5°109.4°
C9C10O3118.8°120.0°
C9C10N3117.1°120.0°
C11C9H16108.5°109.5°
C9C11C12111.2°109.5°
C9C11H17109.0°109.5°
C9C11H18109.0°109.5°
O3C10N3124.0°120.1°
C12C11H17109.1°109.5°
C12C11H18109.1°109.4°
C11C12C13114.3°109.5°
C11C12H19108.2°109.5°
C11C12H20108.2°109.5°
H17C11H18109.5°109.4°
C13C12H19108.3°109.4°
C13C12H20108.3°109.4°
C12C13O4123.8°120.0°
C12C13O5116.4°120.0°
H19C12H20109.5°109.6°
O4C13O5119.7°120.0°
C13O5H21109.5°117.1°
C14N3H22119.3°120.0°
N3C14C15111.0°109.4°
N3C14C16112.1°109.5°
N3C14H23108.7°109.5°
C14N3C10121.4°120.0°
H22N3C10119.3°120.1°
C15C14C16109.4°109.5°
C15C14H23107.9°109.5°
C14C15O6121.9°120.0°
C14C15N4115.5°120.0°
C16C14H23107.7°109.5°
C14C16O7110.4°109.5°
C14C16C17111.6°109.5°
C14C16H24107.9°109.5°
O6C15N4122.6°120.0°
O7C16C17109.2°109.5°
O7C16H24109.4°109.5°
C16O7H25109.5°114.0°
C17C16H24108.4°109.5°
C16C17H26109.5°109.5°
C16C17H27109.5°109.5°
C16C17H28109.5°109.4°
H26C17H27109.4°109.5°
H26C17H28109.4°109.5°
H27C17H28109.5°109.5°
O8C18C19113.0°109.5°
O8C18H29108.6°109.5°
O8C18H30108.6°109.5°
C18O8H32109.5°114.0°
C19C18H29108.6°109.5°
C19C18H30108.6°109.5°
C18C19N4109.4°109.5°
C18C19C20109.9°109.5°
C18C19H33109.6°109.5°
H29C18H30109.4°109.4°
C19N4H31119.0°120.0°
N4C19C20108.8°109.5°
N4C19H33110.2°109.4°
C19N4C15121.9°120.0°
H31N4C15119.0°120.0°
C20C19H33108.8°109.5°
C19C20C21111.2°109.5°
C19C20H34109.0°109.5°
C19C20H35109.0°109.5°
C21C20H34109.0°109.5°
C21C20H35109.0°109.4°
C20C21O10118.9°120.0°
C20C21O9120.2°120.0°
H34C20H35109.5°109.5°
O10C21O9120.8°120.0°
C21O9H36109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2N1177.1°179.7°
O1C1C2H10.0°0.0°
O1C1C2H2120.0°120.0°
O1C1C2H3120.0°120.0°
O1C1N1C33.0°0.0°
O1C1N1H4177.0°180.0°
C1C2H1H2120.0°120.0°
C1C2H1H3120.0°120.0°
C1C2H2H3120.0°120.0°
C2C1N1C3180.0°179.7°
C2C1N1H40.0°0.3°
H1C2H2H3120.0°120.0°
H1C2C1N1177.1°179.8°
H2C2C1N162.9°59.7°
H3C2C1N157.1°60.3°
C3N1H4C1180.0°180.0°
N1C3C4C5118.6°120.0°
N1C3C4H5121.6°120.0°
N1C3C5H5120.2°120.0°
N1C3C4O227.7°20.0°
N1C3C5C6152.5°60.0°
N1C3C5C780.1°180.0°
N1C3C5H636.5°60.0°
N1C3C4N2146.2°160.0°
H4N1C3C4112.5°120.0°
H4N1C3C56.6°120.0°
H4N1C3H5126.2°0.0°
C4C3C5H5120.0°119.9°
C3C4O2N2173.4°180.0°
C4C3C5C687.8°180.0°
C4C3C5C739.7°60.0°
C4C3C5H6156.3°60.0°
C3C4N2C9178.3°180.0°
C3C4N2H151.7°0.0°
C4C3N1C167.5°60.0°
C5C3C4O291.0°100.0°
C3C5C6C7127.1°120.0°
C3C5C6H6115.8°120.0°
C3C5C7H6116.3°120.0°
C3C5C6C8178.2°175.0°
C3C5C6H757.8°65.0°
C3C5C6H861.4°55.0°
C3C5C7H9180.0°60.0°
C3C5C7H1060.0°180.0°
C3C5C7H1160.0°60.0°
C5C3N1C1173.4°60.0°
C5C3C4N295.2°80.0°
H5C3C4O2149.3°140.0°
H5C3C5C632.3°60.0°
H5C3C5C7159.7°60.0°
H5C3C5H683.7°179.9°
H5C3N1C153.8°180.0°
H5C3C4N224.5°40.0°
O2C4N2C94.5°0.1°
O2C4N2H15175.5°180.0°
C6C5C7H6116.9°120.0°
C5C6C8H7120.4°120.0°
C5C6C8H8120.4°120.0°
C5C6H7H8118.7°119.9°
C6C5C7H953.1°60.0°
C6C5C7H10173.2°60.0°
C6C5C7H1166.8°180.0°
C5C6C8H12180.0°60.0°
C5C6C8H1360.0°180.0°
C5C6C8H1460.0°60.0°
C7C5C6C851.1°65.0°
C7C5C6H769.3°55.0°
C7C5C6H8171.5°175.0°
C5C7H9H10120.1°120.0°
C5C7H9H11120.0°120.0°
C5C7H10H11120.0°120.0°
H6C5C6C866.0°55.0°
H6C5C6H7173.6°175.0°
H6C5C6H854.4°65.0°
H6C5C7H963.8°180.0°
H6C5C7H1056.3°60.0°
H6C5C7H11176.3°60.0°
C8C6H7H8118.8°120.1°
C6C8H12H13120.0°119.9°
C6C8H12H14120.0°120.0°
C6C8H13H14120.0°120.0°
H7C6C8H1259.6°60.0°
H7C6C8H13179.6°60.0°
H7C6C8H1460.4°180.0°
H8C6C8H1259.6°180.0°
H8C6C8H1360.4°60.1°
H8C6C8H14179.6°59.9°
H9C7H10H11119.9°120.0°
H12C8H13H14120.0°120.1°
C9N2H15C4180.0°180.0°
N2C9C10C11121.7°120.0°
N2C9C10H16119.9°119.9°
N2C9C11H16120.1°120.0°
N2C9C10O318.3°0.0°
N2C9C11C1260.2°65.0°
N2C9C11H1760.0°55.0°
N2C9C11H18179.5°175.0°
N2C9C10N3161.2°180.0°
H15N2C9C1057.1°25.0°
H15N2C9C1164.1°95.0°
H15N2C9H16176.4°145.0°
C10C9C11H16118.4°120.0°
C9C10O3N3179.4°179.9°
C10C9C11C12178.2°175.0°
C10C9C11H1761.5°65.0°
C10C9C11H1858.0°55.0°
C9C10N3C14178.3°179.9°
C9C10N3H221.7°0.0°
C10C9N2C4122.9°155.0°
C11C9C10O3103.5°120.0°
C9C11C12H17120.3°120.0°
C9C11C12H18120.3°120.0°
C9C11H17H18119.2°120.0°
C9C11C12C13175.6°180.0°
C9C11C12H1954.9°60.1°
C9C11C12H2063.6°60.0°
C11C9N2C4115.9°85.0°
C11C9C10N377.1°59.9°
H16C9C10O3138.2°120.0°
H16C9C11C1259.9°55.0°
H16C9C11H17179.9°175.0°
H16C9C11H1860.4°65.0°
H16C9N2C43.6°35.0°
H16C9C10N341.3°60.1°
O3C10N3C142.4°0.0°
O3C10N3H22177.6°180.0°
C12C11H17H18119.2°120.0°
C11C12C13H19120.7°120.0°
C11C12C13H20120.7°120.0°
C11C12H19H20117.7°120.0°
C11C12C13O44.4°0.0°
C11C12C13O5172.3°180.0°
H17C11C12C1364.1°60.0°
H17C11C12H19175.2°179.9°
H17C11C12H2056.6°60.0°
H18C11C12C1355.4°60.0°
H18C11C12H1965.3°60.0°
H18C11C12H20176.1°179.9°
C13C12H19H20117.9°120.0°
C12C13O4O5176.6°179.9°
C12C13O5H21176.8°180.0°
H19C12C13O4125.1°119.9°
H19C12C13O551.6°60.0°
H20C12C13O4116.3°120.0°
H20C12C13O567.0°60.1°
O4C13O5H210.0°0.0°
C14N3H22C10180.0°180.0°
N3C14C15C16124.2°120.0°
N3C14C15H23119.0°120.0°
N3C14C16H23119.5°120.0°
N3C14C15O633.3°0.0°
N3C14C16O755.2°65.0°
N3C14C16C1766.4°55.0°
N3C14C16H24174.7°175.0°
N3C14C15N4148.8°180.0°
H22N3C14C1574.6°24.9°
H22N3C14C1648.0°95.0°
H22N3C14H23166.9°144.9°
C15C14C16H23116.9°120.0°
C14C15O6N4177.8°180.0°
C15C14C16O768.4°55.0°
C15C14C16C17170.1°175.0°
C15C14C16H2451.2°65.0°
C14C15N4C19168.7°180.0°
C14C15N4H3111.3°0.0°
C15C14N3C10105.4°155.0°
C16C14C15O690.9°120.0°
C14C16O7C17123.0°120.0°
C14C16O7H24118.6°120.0°
C14C16C17H24118.6°120.0°
C14C16O7H25180.0°180.0°
C14C16C17H26180.0°60.0°
C14C16C17H2760.0°180.0°
C14C16C17H2860.0°60.0°
C16C14C15N487.0°60.0°
C16C14N3C10132.0°85.0°
H23C14C15O6152.3°120.0°
H23C14C16O7174.7°175.0°
H23C14C16C1753.1°65.0°
H23C14C16H2465.8°55.0°
H23C14C15N429.8°60.0°
H23C14N3C1013.1°35.0°
O6C15N4C199.2°0.0°
O6C15N4H31170.8°180.0°
O7C16C17H24119.1°120.0°
O7C16C17H2657.7°60.0°
O7C16C17H27177.7°60.0°
O7C16C17H2862.2°180.0°
C17C16O7H2557.0°60.0°
C16C17H26H27120.0°120.0°
C16C17H26H28120.0°120.0°
C16C17H27H28120.0°120.0°
H24C16O7H2561.4°60.0°
H24C16C17H2661.4°NaN°
H24C16C17H2758.6°60.0°
H24C16C17H28178.6°60.0°
H26C17H27H28120.0°120.0°
O8C18C19H29120.5°120.0°
O8C18C19H30120.5°120.0°
O8C18H29H30118.4°120.0°
O8C18C19N4177.9°65.0°
O8C18C19C2062.7°55.0°
O8C18C19H3356.9°175.0°
C19C18H29H30118.4°120.0°
C18C19N4C20120.1°120.0°
C18C19N4H33120.6°120.0°
C18C19N4H3182.8°95.0°
C19C18O8H32180.0°179.9°
C18C19C20H33120.1°120.1°
C18C19C20C21158.7°175.0°
C18C19C20H3481.1°65.0°
C18C19C20H3538.4°55.0°
C18C19N4C1597.2°85.0°
H29C18C19N457.4°175.0°
H29C18O8H3259.4°59.9°
H29C18C19C20176.8°65.0°
H29C18C19H3363.6°55.0°
H30C18C19N461.6°55.0°
H30C18O8H3259.5°60.0°
H30C18C19C2057.9°175.0°
H30C18C19H33177.5°64.9°
C19N4H31C15180.0°180.0°
N4C19C20H33120.1°120.0°
N4C19C20C2181.5°65.0°
N4C19C20H3438.8°55.0°
N4C19C20H35158.2°175.0°
H31N4C19C2037.3°25.0°
H31N4C19H33156.5°145.0°
C19C20C21H34120.3°120.0°
C19C20C21H35120.3°120.0°
C19C20H34H35119.2°120.0°
C19C20C21O10160.5°0.1°
C19C20C21O919.3°180.0°
C20C19N4C15142.7°155.0°
H33C19C20C2138.6°55.0°
H33C19C20H34158.9°175.0°
H33C19C20H3581.7°65.0°
H33C19N4C1523.5°35.0°
C21C20H34H35119.2°119.9°
C20C21O10O9179.7°179.9°
C20C21O9H36179.8°180.0°
H34C20C21O1040.2°120.0°
H34C20C21O9139.5°60.0°
H35C20C21O1079.3°120.1°
H35C20C21O9101.0°60.0°
O10C21O9H360.0°0.0°

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon