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PRD_000260

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1Cdoub1.22Å1.19Å
CO2sing1.35Å1.37Å
O2CTsing1.45Å1.45Å
CTC1sing1.53Å1.56Å
CTC2sing1.53Å1.49Å
CTC3sing1.53Å1.49Å
C1H11sing1.09Å1.10Å
C1H12sing1.09Å1.10Å
C1H13sing1.09Å1.10Å
C2H21sing1.09Å1.10Å
C2H22sing1.09Å1.10Å
C2H23sing1.09Å1.10Å
C3H31sing1.09Å1.10Å
C3H32sing1.09Å1.10Å
C3H33sing1.09Å1.10Å
NCAsing1.47Å1.47Å
NHsing0.97Å1.00Å
CAC4sing1.51Å1.54Å
CACBsing1.53Å1.54Å
CAHAsing1.09Å1.10Å
C4Odoub1.21Å1.25Å
CBHB1sing1.09Å1.10Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
N1CA1sing1.47Å1.45Å
N1CDsing1.47Å1.55Å
CA1C5sing1.51Å1.53Å
CA1CB1sing1.54Å1.53Å
CA1HA1sing1.09Å1.10Å
C5O3doub1.21Å1.23Å
CB1CGsing1.55Å1.54Å
CB1HB21sing1.09Å1.10Å
CB1HB31sing1.09Å1.10Å
CGCDsing1.55Å1.53Å
CGHG2sing1.09Å1.10Å
CGHG3sing1.09Å1.10Å
CDHD2sing1.09Å1.10Å
CDHD3sing1.09Å1.10Å
N2CA2sing1.47Å1.84Å
N2H1sing0.97Å1.00Å
CA2CB2sing1.53Å1.56Å
CA2NHOsing1.47Å1.47Å
CA2HA2sing1.09Å1.10Å
CB2CG1sing1.51Å1.44Å
CB2HB22sing1.09Å1.10Å
CB2HB32sing1.09Å1.10Å
CG1CD1doub1.38Å1.39ÅAromatic
CG1CD2sing1.38Å1.39ÅAromatic
CD1CE1sing1.38Å1.40ÅAromatic
CD1HD1sing1.08Å1.08Å
CD2CE2doub1.38Å1.39ÅAromatic
CD2HD21sing1.08Å1.08Å
CE1CZdoub1.38Å1.39ÅAromatic
CE1HE1sing1.08Å1.08Å
CE2CZsing1.38Å1.40ÅAromatic
CE2HE2sing1.08Å1.08Å
CZHZsing1.08Å1.08Å
NHOC6sing1.35Å1.38Å
NHOHNsing0.97Å1.00Å
C6O4doub1.22Å1.27Å
C6OXTsing1.35Å1.43Å
OXTHXTsing0.97Å0.95Å
CNsing1.35Å1.42Å
C4N1sing1.35Å1.32Å
C5N2sing1.35Å1.30Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1CO2117.0°120.0°
O1CN126.0°120.0°
CO2CT108.8°116.9°
O2CN103.8°120.0°
O2CTC1116.2°109.5°
O2CTC2112.8°109.4°
O2CTC3109.9°109.5°
C1CTC2103.4°109.5°
C1CTC3110.1°109.5°
CTC1H11109.5°109.5°
CTC1H12109.5°109.5°
CTC1H13109.5°109.5°
C2CTC3103.5°109.4°
CTC2H21109.5°109.5°
CTC2H22109.5°109.5°
CTC2H23109.5°109.5°
CTC3H31109.5°109.4°
CTC3H32109.5°109.5°
CTC3H33109.5°109.5°
H11C1H12109.4°109.4°
H11C1H13109.5°109.4°
H12C1H13109.5°109.4°
H21C2H22109.5°109.4°
H21C2H23109.5°109.5°
H22C2H23109.5°109.4°
H31C3H32109.5°109.5°
H31C3H33109.4°109.5°
H32C3H33109.5°109.5°
CANH117.6°120.0°
NCAC4114.9°109.5°
NCACB111.1°109.5°
NCAHA104.1°109.5°
CANC124.9°120.0°
HNC117.6°120.0°
C4CACB108.4°109.5°
C4CAHA107.0°109.4°
CAC4O118.9°120.0°
CAC4N1116.6°120.0°
CBCAHA111.2°109.5°
CACBHB1109.5°109.5°
CACBHB2109.4°109.5°
CACBHB3109.5°109.4°
OC4N1124.5°120.0°
HB1CBHB2109.5°109.5°
HB1CBHB3109.5°109.4°
HB2CBHB3109.5°109.5°
CA1N1CD105.1°108.7°
N1CA1C5110.4°109.9°
N1CA1CB1107.5°107.3°
N1CA1HA1112.1°109.9°
CA1N1C4124.0°125.6°
N1CDCG104.7°104.7°
N1CDHD2111.1°110.3°
N1CDHD3111.1°110.4°
CDN1C4117.9°125.6°
C5CA1CB1114.7°109.9°
C5CA1HA1104.5°109.9°
CA1C5O3131.4°120.0°
CA1C5N2105.6°120.0°
CB1CA1HA1107.6°109.9°
CA1CB1CG102.9°103.0°
CA1CB1HB21111.7°110.7°
CA1CB1HB31111.7°110.8°
O3C5N2122.7°120.0°
CGCB1HB21111.7°110.7°
CGCB1HB31111.8°110.7°
CB1CGCD107.9°101.5°
CB1CGHG2110.0°111.1°
CB1CGHG3110.0°111.0°
HB21CB1HB31107.1°110.8°
CDCGHG2110.0°111.1°
CDCGHG3110.0°110.9°
CGCDHD2111.1°110.5°
CGCDHD3111.1°110.4°
HG2CGHG3108.9°110.9°
HD2CDHD3107.8°110.5°
CA2N2H1120.0°120.0°
N2CA2CB285.4°109.5°
N2CA2NHO102.2°109.5°
N2CA2HA2134.0°109.5°
CA2N2C5119.9°120.0°
H1N2C5120.0°120.0°
CB2CA2NHO125.9°109.4°
CB2CA2HA2113.3°109.5°
CA2CB2CG1121.7°109.5°
CA2CB2HB22105.6°109.4°
CA2CB2HB32105.6°109.5°
NHOCA2HA299.3°109.4°
CA2NHOC6116.9°120.0°
CA2NHOHN121.5°120.0°
CG1CB2HB22105.6°109.4°
CG1CB2HB32105.6°109.5°
CB2CG1CD1122.1°120.0°
CB2CG1CD2117.3°120.0°
HB22CB2HB32113.1°109.5°
CD1CG1CD2120.6°120.0°
CG1CD1CE1117.8°120.0°
CG1CD1HD1121.1°120.0°
CG1CD2CE2121.8°120.0°
CG1CD2HD21119.1°120.0°
CE1CD1HD1121.1°120.0°
CD1CE1CZ121.8°120.0°
CD1CE1HE1119.1°120.0°
CE2CD2HD21119.1°120.0°
CD2CE2CZ118.1°120.0°
CD2CE2HE2120.9°120.0°
CZCE1HE1119.1°120.0°
CE1CZCE2119.9°120.0°
CE1CZHZ120.0°120.0°
CZCE2HE2120.9°120.0°
CE2CZHZ120.0°120.0°
C6NHOHN121.6°119.9°
NHOC6O4122.8°120.0°
NHOC6OXT121.7°120.0°
O4C6OXT115.5°119.9°
C6OXTHXT109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1CO2N143.5°179.8°
O1CO2CT59.0°0.0°
O1CNCA64.0°0.1°
O1CNH116.0°180.0°
CO2CTC126.2°60.0°
CO2CTC293.0°180.0°
CO2CTC3152.0°60.0°
O2CNCA156.9°179.7°
O2CNH23.1°0.3°
O2CTC1C2124.1°119.9°
O2CTC1C3125.8°120.1°
O2CTC2C3118.8°120.0°
O2CTC1H11180.0°59.9°
O2CTC1H1260.0°180.0°
O2CTC1H1360.0°60.0°
O2CTC2H21180.0°60.0°
O2CTC2H2260.0°180.0°
O2CTC2H2360.0°60.0°
O2CTC3H31180.0°60.0°
O2CTC3H3260.0°180.0°
O2CTC3H3360.0°59.9°
CTO2CN157.6°179.8°
C1CTC2C3114.9°120.0°
CTC1H11H12120.0°120.1°
CTC1H11H13120.0°120.0°
CTC1H12H13120.0°120.0°
C1CTC2H2153.7°180.0°
C1CTC2H2266.3°60.0°
C1CTC2H23173.7°60.0°
C1CTC3H3150.7°60.1°
C1CTC3H32170.8°60.0°
C1CTC3H3369.2°180.0°
C2CTC1H1155.9°60.0°
C2CTC1H12175.9°60.0°
C2CTC1H1364.1°180.0°
CTC2H21H22120.0°120.0°
CTC2H21H23120.0°120.1°
CTC2H22H23120.0°120.0°
C2CTC3H3159.3°180.0°
C2CTC3H3260.7°60.0°
C2CTC3H33179.3°60.0°
C3CTC1H1154.2°180.0°
C3CTC1H1265.8°60.0°
C3CTC1H13174.2°60.0°
C3CTC2H2161.2°60.0°
C3CTC2H22178.8°60.0°
C3CTC2H2358.8°180.0°
CTC3H31H32120.0°120.0°
CTC3H31H33120.0°120.0°
CTC3H32H33120.0°120.0°
H11C1H12H13120.0°119.9°
H21C2H22H23120.0°120.0°
H31C3H32H33119.9°120.0°
CANHC180.0°180.0°
NCAC4CB125.0°120.0°
NCAC4HA115.0°120.0°
NCACBHA115.4°120.0°
NCAC4O37.3°25.4°
NCACBHB1180.0°65.0°
NCACBHB260.0°175.0°
NCACBHB360.0°55.0°
NCAC4N1145.0°154.7°
HNCAC454.7°25.0°
HNCACB68.9°95.0°
HNCAHA171.4°145.0°
C4CACBHA117.3°120.0°
CAC4ON1177.5°180.0°
C4CACBHB152.8°55.0°
C4CACBHB2172.8°65.0°
C4CACBHB367.2°175.0°
CAC4N1CA1159.9°175.4°
CAC4N1CD64.7°4.4°
C4CANC125.3°155.0°
CBCAC4O87.7°94.6°
CACBHB1HB2120.0°120.1°
CACBHB1HB3120.0°119.9°
CACBHB2HB3120.0°120.0°
CBCANC111.1°85.0°
CBCAC4N190.0°85.3°
HACAC4O152.3°145.4°
HACACBHB164.5°175.0°
HACACBHB255.4°55.0°
HACACBHB3175.4°65.1°
HACANC8.6°35.0°
HACAC4N130.0°34.7°
OC4N1CA117.7°4.6°
OC4N1CD117.8°175.6°
HB1CBHB2HB3120.0°120.0°
CA1N1CDC4143.0°179.8°
N1CA1C5CB1121.6°117.8°
N1CA1C5HA1120.8°121.1°
N1CA1CB1HA1121.0°119.4°
N1CA1C5O364.0°0.0°
N1CA1CB1CG31.3°22.2°
N1CA1CB1HB2188.7°140.6°
N1CA1CB1HB31151.4°96.1°
CA1N1CDCG25.3°24.4°
CA1N1CDHD294.7°94.5°
CA1N1CDHD3145.3°143.2°
N1CA1C5N2122.0°180.0°
CDN1CA1C5161.5°120.7°
CDN1CA1CB135.7°1.2°
CDN1CA1HA182.4°118.3°
N1CDCGCB15.9°37.3°
N1CDCGHD2120.0°118.7°
N1CDCGHD3120.0°118.8°
N1CDCGHG2114.1°80.9°
N1CDCGHG3125.9°155.2°
N1CDHD2HD3121.9°122.3°
C5CA1CB1HA1115.8°121.1°
CA1C5O3N2173.1°179.9°
C5CA1CB1CG154.5°97.2°
C5CA1CB1HB2134.5°21.1°
C5CA1CB1HB3185.5°144.4°
CA1C5N2CA2172.4°180.0°
CA1C5N2H17.7°0.1°
C5CA1N1C458.5°59.5°
CB1CA1C5O357.6°117.8°
CA1CB1CGHB21120.0°118.3°
CA1CB1CGHB31120.0°118.4°
CA1CB1HB21HB31122.6°123.3°
CA1CB1CGCD14.4°35.7°
CA1CB1CGHG2134.4°82.5°
CA1CB1CGHG3105.6°153.5°
CB1CA1N1C4175.8°179.0°
CB1CA1C5N2116.4°62.1°
HA1CA1C5O3175.2°121.1°
HA1CA1CB1CG89.6°141.7°
HA1CA1CB1HB21150.4°100.0°
HA1CA1CB1HB3130.4°23.3°
HA1CA1N1C457.7°61.6°
HA1CA1C5N21.3°59.0°
O3C5N2CA22.3°0.1°
O3C5N2H1177.7°180.0°
CGCB1HB21HB31122.7°123.2°
CB1CGCDHG2120.0°118.1°
CB1CGCDHG3120.0°118.0°
CB1CGHG2HG3120.6°124.0°
CB1CGCDHD2114.1°81.5°
CB1CGCDHD3125.8°156.1°
HB21CB1CGCD105.6°154.0°
HB21CB1CGHG214.4°35.8°
HB21CB1CGHG3134.4°88.1°
HB31CB1CGCD134.4°82.8°
HB31CB1CGHG2105.6°159.0°
HB31CB1CGHG314.4°35.1°
CDCGHG2HG3120.7°123.8°
CGCDHD2HD3122.0°122.4°
CGCDN1C4168.3°155.8°
HG2CGCDHD2125.9°160.4°
HG2CGCDHD35.9°37.9°
HG3CGCDHD25.9°36.5°
HG3CGCDHD3114.1°86.0°
HD2CDN1C448.3°85.3°
HD3CDN1C471.7°37.0°
CA2N2H1C5180.0°179.9°
N2CA2CB2NHO101.7°120.0°
N2CA2CB2HA2136.4°120.1°
N2CA2NHOHA2139.0°120.0°
N2CA2CB2CG1136.5°175.0°
N2CA2CB2HB22103.6°55.1°
N2CA2CB2HB3216.5°65.0°
N2CA2NHOC6131.1°105.0°
N2CA2NHOHN48.9°75.0°
H1N2CA2CB240.9°44.9°
H1N2CA2NHO84.8°75.1°
H1N2CA2HA2159.2°165.0°
CB2CA2NHOHA2127.8°120.0°
CA2CB2CG1HB22120.0°119.9°
CA2CB2CG1HB32120.0°120.1°
CA2CB2HB22HB32115.0°120.1°
CA2CB2CG1CD12.4°89.9°
CA2CB2CG1CD2178.0°90.3°
CB2CA2NHOC6135.8°135.0°
CB2CA2NHOHN44.3°45.0°
CB2CA2N2C5139.1°135.0°
NHOCA2CB2CG134.7°65.0°
NHOCA2CB2HB22154.7°175.0°
NHOCA2CB2HB3285.3°55.0°
CA2NHOC6HN180.0°180.0°
CA2NHOC6O412.3°0.0°
CA2NHOC6OXT168.6°180.0°
NHOCA2N2C595.2°105.0°
HA2CA2CB2CG187.2°54.9°
HA2CA2CB2HB2232.8°65.0°
HA2CA2CB2HB32152.8°175.0°
HA2CA2NHOC68.0°15.0°
HA2CA2NHOHN172.0°165.0°
HA2CA2N2C520.8°14.9°
CG1CB2HB22HB32114.9°120.0°
CB2CG1CD1CD2179.6°179.8°
CB2CG1CD1CE1178.0°180.0°
CB2CG1CD1HD12.0°0.0°
CB2CG1CD2CE2179.2°180.0°
CB2CG1CD2HD210.8°0.1°
HB22CB2CG1CD1122.4°30.0°
HB22CB2CG1CD258.1°149.8°
HB32CB2CG1CD1117.6°150.0°
HB32CB2CG1CD262.0°29.8°
CG1CD1CE1HD1180.0°180.0°
CD1CG1CD2CE20.4°0.2°
CD1CG1CD2HD21179.6°179.7°
CG1CD1CE1CZ2.6°0.0°
CG1CD1CE1HE1177.4°180.0°
CD2CG1CD1CE11.6°0.3°
CD2CG1CD1HD1178.5°179.8°
CG1CD2CE2HD21180.0°179.9°
CG1CD2CE2CZ0.2°0.0°
CG1CD2CE2HE2179.8°179.9°
CD1CE1CZHE1180.0°179.9°
CD1CE1CZCE22.4°0.2°
CD1CE1CZHZ177.6°180.0°
HD1CD1CE1CZ177.4°180.0°
HD1CD1CE1HE12.6°0.0°
CD2CE2CZCE11.2°0.2°
CD2CE2CZHE2180.0°179.9°
CD2CE2CZHZ178.8°180.0°
HD21CD2CE2CZ179.8°179.9°
HD21CD2CE2HE20.1°0.0°
CE1CZCE2HZ180.0°179.8°
CE1CZCE2HE2178.9°179.7°
HE1CE1CZCE2177.6°179.8°
HE1CE1CZHZ2.4°0.1°
HE2CE2CZHZ1.1°0.1°
NHOC6O4OXT179.2°179.9°
NHOC6OXTHXT179.2°180.0°
HNNHOC6O4167.8°180.0°
HNNHOC6OXT11.4°0.1°
O4C6OXTHXT0.0°0.1°

223532

PDB entries from 2024-08-07

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