Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

PRD_000240

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1doub1.21Å1.30Å
C1C2sing1.51Å1.53Å
C2H1sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C2H3sing1.09Å1.10Å
N1C3sing1.46Å1.45Å
N1H4sing0.97Å1.00Å
C3C4sing1.51Å1.52Å
C3C5sing1.53Å1.54Å
C3H5sing1.09Å1.10Å
C4O2doub1.21Å1.21Å
C5C6sing1.53Å1.56Å
C5C7sing1.53Å1.53Å
C5H6sing1.09Å1.10Å
C6C8sing1.53Å1.54Å
C6H7sing1.09Å1.10Å
C6H8sing1.09Å1.10Å
C7H9sing1.09Å1.10Å
C7H10sing1.09Å1.10Å
C7H11sing1.09Å1.10Å
C8H12sing1.09Å1.10Å
C8H13sing1.09Å1.10Å
C8H14sing1.09Å1.10Å
N2C9sing1.47Å1.49Å
N2C13sing1.47Å1.46Å
C9C10sing1.51Å1.52Å
C9C11sing1.54Å1.52Å
C9H15sing1.09Å1.10Å
C10O3doub1.21Å1.22Å
C11C12sing1.55Å1.49Å
C11H16sing1.09Å1.10Å
C11H17sing1.09Å1.10Å
C12C13sing1.55Å1.52Å
C12H18sing1.09Å1.10Å
C12H19sing1.09Å1.10Å
C13H20sing1.09Å1.10Å
C13H21sing1.09Å1.10Å
N3C14sing1.47Å1.46Å
N3H22sing0.97Å1.00Å
C14C15sing1.53Å1.51Å
C14C16sing1.53Å1.54Å
C14H23sing1.09Å1.10Å
C15O4sing1.43Å1.45Å
C15H24sing1.09Å1.10Å
C15H25sing1.09Å1.10Å
O4H26sing0.97Å0.95Å
C16C17sing1.51Å1.53Å
C16H27sing1.09Å1.10Å
C16H28sing1.09Å1.10Å
C17C18doub1.38Å1.38ÅAromatic
C17C19sing1.38Å1.40ÅAromatic
C18C20sing1.38Å1.38ÅAromatic
C18H29sing1.08Å1.08Å
C19C21doub1.38Å1.39ÅAromatic
C19H30sing1.08Å1.08Å
C20C22doub1.38Å1.39ÅAromatic
C20H31sing1.08Å1.08Å
C21C22sing1.38Å1.39ÅAromatic
C21H32sing1.08Å1.08Å
C22H33sing1.08Å1.08Å
C1N1sing1.35Å1.34Å
C10N3sing1.35Å1.32Å
C4N2sing1.35Å1.31Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2121.7°120.0°
O1C1N1118.7°120.0°
C1C2H1109.5°109.5°
C1C2H2109.4°109.4°
C1C2H3109.5°109.4°
C2C1N1119.6°120.0°
H1C2H2109.5°109.5°
H1C2H3109.4°109.5°
H2C2H3109.5°109.4°
C3N1H4119.0°120.0°
N1C3C4108.2°109.5°
N1C3C5110.1°109.4°
N1C3H5109.9°109.5°
C3N1C1122.1°120.0°
H4N1C1119.0°120.0°
C4C3C5111.0°109.4°
C4C3H5108.9°109.5°
C3C4O2119.0°120.0°
C3C4N2121.6°120.0°
C5C3H5108.7°109.5°
C3C5C6113.8°109.5°
C3C5C7111.8°109.4°
C3C5H6106.3°109.5°
O2C4N2119.4°120.0°
C6C5C7111.6°109.4°
C6C5H6106.2°109.5°
C5C6C8108.9°109.5°
C5C6H7109.6°109.5°
C5C6H8109.6°109.4°
C7C5H6106.5°109.5°
C5C7H9109.5°109.4°
C5C7H10109.5°109.5°
C5C7H11109.5°109.5°
C8C6H7109.6°109.5°
C8C6H8109.7°109.5°
C6C8H12109.5°109.5°
C6C8H13109.5°109.5°
C6C8H14109.5°109.5°
H7C6H8109.4°109.5°
H9C7H10109.5°109.4°
H9C7H11109.4°109.5°
H10C7H11109.5°109.5°
H12C8H13109.5°109.4°
H12C8H14109.4°109.5°
H13C8H14109.5°109.5°
C9N2C13114.2°108.7°
N2C9C10113.6°109.9°
N2C9C11100.6°107.2°
N2C9H15110.5°109.9°
C9N2C4120.9°125.6°
N2C13C12102.4°104.7°
N2C13H20111.2°110.3°
N2C13H21111.2°110.4°
C13N2C4124.9°125.6°
C10C9C11111.8°109.9°
C10C9H15110.0°109.9°
C9C10O3128.5°120.0°
C9C10N3114.9°120.0°
C11C9H15110.0°110.0°
C9C11C12105.6°103.0°
C9C11H16110.4°110.7°
C9C11H17110.4°110.7°
O3C10N3116.6°120.0°
C12C11H16110.5°110.7°
C12C11H17110.4°110.7°
C11C12C13107.4°101.4°
C11C12H18110.0°111.0°
C11C12H19110.0°111.0°
H16C11H17109.4°110.7°
C13C12H18110.0°111.2°
C13C12H19110.0°110.9°
C12C13H20111.2°110.5°
C12C13H21111.2°110.4°
H18C12H19109.5°110.9°
H20C13H21109.4°110.4°
C14N3H22118.0°120.0°
N3C14C15109.7°109.5°
N3C14C16111.5°109.5°
N3C14H23109.0°109.4°
C14N3C10124.0°120.0°
H22N3C10118.0°120.0°
C15C14C16110.3°109.5°
C15C14H23108.4°109.5°
C14C15O4109.4°109.5°
C14C15H24109.5°109.5°
C14C15H25109.5°109.4°
C16C14H23108.0°109.5°
C14C16C17112.8°109.5°
C14C16H27108.6°109.5°
C14C16H28108.7°109.5°
O4C15H24109.5°109.5°
O4C15H25109.5°109.5°
C15O4H26109.5°114.1°
H24C15H25109.4°109.4°
C17C16H27108.7°109.5°
C17C16H28108.6°109.5°
C16C17C18121.9°120.0°
C16C17C19118.5°120.0°
H27C16H28109.5°109.5°
C18C17C19119.6°120.0°
C17C18C20120.0°120.0°
C17C18H29120.0°120.0°
C17C19C21120.7°120.0°
C17C19H30119.6°120.1°
C20C18H29120.0°120.0°
C18C20C22120.6°120.0°
C18C20H31119.7°120.0°
C21C19H30119.6°119.9°
C19C21C22119.2°120.0°
C19C21H32120.4°120.1°
C22C20H31119.7°120.0°
C20C22C21119.9°120.0°
C20C22H33120.1°120.0°
C22C21H32120.4°120.0°
C21C22H33120.1°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2N1179.3°179.7°
O1C1C2H10.0°0.0°
O1C1C2H2120.0°120.1°
O1C1C2H3120.0°120.0°
O1C1N1C37.1°0.0°
O1C1N1H4172.9°180.0°
C1C2H1H2120.0°120.0°
C1C2H1H3120.0°120.0°
C1C2H2H3120.0°119.9°
C2C1N1C3173.6°179.7°
C2C1N1H46.4°0.3°
H1C2H2H3120.0°120.0°
H1C2C1N1179.3°179.7°
H2C2C1N159.3°59.7°
H3C2C1N160.8°60.3°
C3N1H4C1180.0°180.0°
N1C3C4C5121.0°119.9°
N1C3C4H5119.4°120.1°
N1C3C5H5120.4°120.0°
N1C3C4O246.0°39.1°
N1C3C5C664.5°56.5°
N1C3C5C7167.9°176.5°
N1C3C5H652.0°63.5°
N1C3C4N2134.4°140.9°
H4N1C3C475.4°120.0°
H4N1C3C546.1°120.0°
H4N1C3H5165.9°0.0°
C4C3C5H5119.8°120.0°
C3C4O2N2179.6°179.9°
C4C3C5C6175.6°176.5°
C4C3C5C748.0°63.6°
C4C3C5H667.8°56.4°
C3C4N2C9175.1°175.7°
C3C4N2C136.2°4.0°
C4C3N1C1104.6°60.0°
C5C3C4O275.0°80.9°
C3C5C6C7127.7°119.9°
C3C5C6H6116.6°120.1°
C3C5C7H6115.8°120.0°
C3C5C6C8163.9°175.0°
C3C5C6H776.1°64.9°
C3C5C6H844.0°55.0°
C3C5C7H9180.0°63.7°
C3C5C7H1060.0°56.3°
C3C5C7H1160.0°176.3°
C5C3N1C1133.9°60.0°
C5C3C4N2104.6°99.2°
H5C3C4O2165.3°159.1°
H5C3C5C655.9°63.5°
H5C3C5C771.7°56.4°
H5C3C5H6172.4°176.5°
H5C3N1C114.2°180.0°
H5C3C4N215.0°20.8°
O2C4N2C94.5°4.2°
O2C4N2C13174.2°176.0°
C6C5C7H6115.4°120.0°
C5C6C8H7119.9°120.0°
C5C6C8H8119.9°120.0°
C5C6H7H8120.2°120.0°
C6C5C7H951.2°176.4°
C6C5C7H10171.2°63.7°
C6C5C7H1168.8°56.3°
C5C6C8H12180.0°179.9°
C5C6C8H1360.0°60.0°
C5C6C8H1460.0°60.0°
C7C5C6C868.4°65.0°
C7C5C6H751.6°55.0°
C7C5C6H8171.7°175.0°
C5C7H9H10120.0°120.0°
C5C7H9H11120.0°120.0°
C5C7H10H11120.0°120.0°
H6C5C6C847.3°55.0°
H6C5C6H7167.2°175.0°
H6C5C6H872.7°65.0°
H6C5C7H964.3°56.4°
H6C5C7H1055.7°176.3°
H6C5C7H11175.8°63.7°
C8C6H7H8120.3°120.0°
C6C8H12H13120.0°120.0°
C6C8H12H14120.0°120.0°
C6C8H13H14120.0°120.0°
H7C6C8H1260.1°60.0°
H7C6C8H13179.9°180.0°
H7C6C8H1459.9°60.0°
H8C6C8H1260.1°60.0°
H8C6C8H1360.0°60.0°
H8C6C8H14179.9°NaN°
H9C7H10H11119.9°120.0°
H12C8H13H14120.0°120.0°
C9N2C13C4178.8°179.8°
N2C9C10C11113.0°117.7°
N2C9C10H15124.5°121.0°
N2C9C11H15116.6°119.5°
N2C9C10O350.2°0.0°
N2C9C11C1230.3°22.2°
N2C9C11H16149.7°140.6°
N2C9C11H1789.1°96.2°
C9N2C13C124.2°24.5°
C9N2C13H20123.1°94.5°
C9N2C13H21114.7°143.2°
N2C9C10N3130.7°180.0°
C13N2C9C1097.9°120.7°
C13N2C9C1121.7°1.3°
C13N2C9H15137.9°118.3°
N2C13C12C1116.0°37.3°
N2C13C12H20118.9°118.8°
N2C13C12H21118.9°118.8°
N2C13C12H18103.7°80.8°
N2C13C12H19135.6°155.2°
N2C13H20H21123.3°122.3°
C10C9C11H15122.6°121.1°
C9C10O3N3179.1°180.0°
C10C9C11C1290.5°97.2°
C10C9C11H1628.9°21.2°
C10C9C11H17150.1°144.4°
C9C10N3C14179.2°180.0°
C9C10N3H220.8°0.0°
C10C9N2C483.3°59.6°
C11C9C10O362.8°117.8°
C9C11C12H16119.4°118.4°
C9C11C12H17119.4°118.4°
C9C11H16H17121.8°123.2°
C9C11C12C1329.9°35.6°
C9C11C12H1889.8°82.6°
C9C11C12H19149.5°153.5°
C11C9C10N3116.4°62.2°
C11C9N2C4157.1°178.9°
H15C9C10O3174.7°121.0°
H15C9C11C12146.9°141.7°
H15C9C11H1693.7°99.9°
H15C9C11H1727.5°23.3°
H15C9C10N36.2°59.0°
H15C9N2C440.9°61.5°
O3C10N3C141.6°0.0°
O3C10N3H22178.4°180.0°
C12C11H16H17121.8°123.2°
C11C12C13H18119.7°118.1°
C11C12C13H19119.7°118.0°
C11C12H18H19121.0°123.9°
C11C12C13H20102.9°81.6°
C11C12C13H21134.8°156.1°
H16C11C12C13149.3°154.1°
H16C11C12H1829.6°35.8°
H16C11C12H1991.1°88.1°
H17C11C12C1389.5°82.7°
H17C11C12H18150.8°159.0°
H17C11C12H1930.1°35.2°
C13C12H18H19120.9°123.9°
C12C13H20H21123.2°122.4°
C12C13N2C4174.6°155.8°
H18C12C13H20137.4°160.4°
H18C12C13H2115.2°38.0°
H19C12C13H2016.7°36.4°
H19C12C13H21105.5°86.0°
H20C13N2C455.7°85.2°
H21C13N2C466.6°37.0°
C14N3H22C10180.0°180.0°
N3C14C15C16123.1°120.0°
N3C14C15H23118.9°120.0°
N3C14C16H23119.7°120.0°
N3C14C15O4175.7°65.0°
N3C14C15H2455.7°55.0°
N3C14C15H2564.3°175.0°
N3C14C16C1751.7°65.0°
N3C14C16H2768.8°55.0°
N3C14C16H28172.2°175.0°
H22N3C14C1576.1°95.0°
H22N3C14C1646.4°25.0°
H22N3C14H23165.5°145.1°
C15C14C16H23118.3°120.0°
C14C15O4H24120.0°120.0°
C14C15O4H25120.0°120.0°
C14C15H24H25120.0°119.9°
C14C15O4H26180.0°180.0°
C15C14C16C17173.8°175.0°
C15C14C16H2753.2°65.0°
C15C14C16H2865.8°55.0°
C15C14N3C10103.9°85.0°
C16C14C15O452.6°55.0°
C16C14C15H2467.4°175.1°
C16C14C15H25172.6°65.0°
C14C16C17H27120.5°120.0°
C14C16C17H28120.5°120.0°
C14C16H27H28118.5°120.0°
C14C16C17C18132.2°90.0°
C14C16C17C1947.8°90.3°
C16C14N3C10133.6°155.0°
H23C14C15O465.4°175.0°
H23C14C15H24174.6°64.9°
H23C14C15H2554.6°55.0°
H23C14C16C1768.0°55.0°
H23C14C16H27171.5°175.0°
H23C14C16H2852.5°65.0°
H23C14N3C1014.5°35.0°
O4C15H24H25120.1°120.0°
H24C15O4H2660.0°59.9°
H25C15O4H2660.0°60.0°
C17C16H27H28118.5°120.0°
C16C17C18C19180.0°179.8°
C16C17C18C20180.0°180.0°
C16C17C18H290.0°0.0°
C16C17C19C21179.6°180.0°
C16C17C19H300.4°0.1°
H27C16C17C1811.7°30.1°
H27C16C17C19168.2°149.7°
H28C16C17C18107.3°150.0°
H28C16C17C1972.7°29.8°
C17C18C20H29180.0°180.0°
C18C17C19C210.4°0.2°
C18C17C19H30179.6°179.7°
C17C18C20C220.3°0.0°
C17C18C20H31179.7°180.0°
C19C17C18C200.0°0.2°
C19C17C18H29180.0°179.8°
C17C19C21H30180.0°180.0°
C17C19C21C220.4°0.0°
C17C19C21H32179.6°179.9°
C18C20C22H31180.0°179.9°
C18C20C22C210.3°0.2°
C18C20C22H33179.8°179.9°
H29C18C20C22179.7°180.0°
H29C18C20H310.3°0.1°
C19C21C22C200.1°0.2°
C19C21C22H32180.0°179.9°
C19C21C22H33179.9°180.0°
H30C19C21C22179.6°179.9°
H30C19C21H320.4°0.0°
C20C22C21H33180.0°179.8°
C20C22C21H32179.9°179.7°
H31C20C22C21179.7°179.8°
H31C20C22H330.2°0.0°
H32C21C22H330.1°0.2°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon