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PRD_000234

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C1sing1.35Å1.34Å
N1C2sing1.47Å1.50Å
N1C6sing1.47Å1.49Å
C1O1doub1.22Å1.23Å
C2C3sing1.53Å1.48Å
C2H21sing1.09Å1.10Å
C2H22sing1.09Å1.10Å
C3N4sing1.47Å1.46Å
C3H31sing1.09Å1.10Å
C3H32sing1.09Å1.10Å
N4C5sing1.47Å1.46Å
N4HN4sing1.01Å1.00Å
C5C6sing1.53Å1.51Å
C5H51sing1.09Å1.10Å
C5H52sing1.09Å1.10Å
C6H61sing1.09Å1.10Å
C6H62sing1.09Å1.10Å
NCAsing1.46Å1.46Å
NHsing0.97Å1.00Å
CACsing1.51Å1.51Å
CACBsing1.53Å1.52Å
CAHAsing1.09Å1.10Å
COdoub1.21Å1.23Å
CBCGsing1.53Å1.53Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
CGCD1sing1.53Å1.52Å
CGCD2sing1.53Å1.50Å
CGHGsing1.09Å1.10Å
CD1HD11sing1.09Å1.10Å
CD1HD12sing1.09Å1.10Å
CD1HD13sing1.09Å1.10Å
CD2HD21sing1.09Å1.10Å
CD2HD22sing1.09Å1.10Å
CD2HD23sing1.09Å1.10Å
C11C21sing1.53Å1.55Å
C11H11sing1.09Å1.10Å
C11H12sing1.09Å1.10Å
C21C31sing1.53Å1.54Å
C21H211sing1.09Å1.10Å
C21H221sing1.09Å1.10Å
C31N2sing1.47Å1.45Å
C31C4sing1.53Å1.53Å
C31H3sing1.09Å1.10Å
N2HN2sing0.97Å1.00Å
C4C51sing1.53Å1.52Å
C4H41sing1.09Å1.10Å
C4H42sing1.09Å1.10Å
C51C1'sing1.51Å1.51Å
C51H511sing1.09Å1.10Å
C51H521sing1.09Å1.10Å
C1'C2'doub1.38Å1.41ÅAromatic
C1'C6'sing1.38Å1.41ÅAromatic
C2'C3'sing1.38Å1.40ÅAromatic
C2'H2'sing1.08Å1.08Å
C3'C4'doub1.38Å1.40ÅAromatic
C3'H3'sing1.08Å1.08Å
C4'C5'sing1.38Å1.39ÅAromatic
C4'H4'sing1.08Å1.08Å
C5'C6'doub1.38Å1.40ÅAromatic
C5'H5'sing1.08Å1.08Å
C6'H6'sing1.08Å1.08Å
C12C22doub1.38Å1.40ÅAromatic
C12C61sing1.38Å1.39ÅAromatic
C12H1sing1.08Å1.08Å
C22C32sing1.38Å1.41ÅAromatic
C22H2sing1.08Å1.08Å
C32C41doub1.38Å1.41ÅAromatic
C32H33sing1.08Å1.08Å
C41S1sing1.76Å1.77Å
C41C52sing1.38Å1.43ÅAromatic
S1O11doub1.42Å1.56Å
S1O2doub1.42Å1.55Å
C52C61doub1.38Å1.40ÅAromatic
C52H5sing1.08Å1.08Å
C61H6sing1.08Å1.08Å
C1Nsing1.35Å1.33Å
CN2sing1.35Å1.33Å
C11S1sing1.81Å1.82Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1N1C2122.0°120.9°
C1N1C6123.6°120.9°
N1C1O1119.2°120.0°
N1C1N120.5°120.0°
C2N1C6114.0°118.2°
N1C2C3113.1°108.6°
N1C2H21108.3°109.6°
N1C2H22108.3°109.6°
N1C6C5113.4°108.8°
N1C6H61108.2°109.6°
N1C6H62108.2°109.6°
O1C1N120.0°120.0°
C3C2H21108.3°109.6°
C3C2H22108.3°109.6°
C2C3N4109.9°109.4°
C2C3H31109.3°109.5°
C2C3H32109.3°109.5°
H21C2H22110.6°109.8°
N4C3H31109.4°109.5°
N4C3H32109.3°109.5°
C3N4C5112.7°111.2°
C3N4HN4108.4°111.0°
H31C3H32109.6°109.5°
C5N4HN4108.4°111.0°
N4C5C6111.5°109.4°
N4C5H51108.8°109.5°
N4C5H52108.8°109.5°
C6C5H51108.8°109.6°
C6C5H52108.8°109.3°
C5C6H61108.2°109.6°
C5C6H62108.2°109.4°
H51C5H52110.1°109.5°
H61C6H62110.7°109.8°
CANH120.0°120.0°
NCAC108.3°109.5°
NCACB111.4°109.5°
NCAHA108.8°109.5°
CANC1120.1°120.0°
HNC1119.9°120.1°
CCACB109.0°109.5°
CCAHA111.2°109.4°
CACO120.0°120.0°
CACN2116.4°120.0°
CBCAHA108.2°109.4°
CACBCG121.5°109.5°
CACBHB2105.7°109.4°
CACBHB3105.7°109.4°
OCN2123.3°120.0°
CGCBHB2105.6°109.5°
CGCBHB3105.6°109.5°
CBCGCD1114.7°109.5°
CBCGCD2107.6°109.4°
CBCGHG108.3°109.5°
HB2CBHB3113.0°109.5°
CD1CGCD2112.3°109.5°
CD1CGHG103.1°109.5°
CGCD1HD11109.5°109.5°
CGCD1HD12109.5°109.5°
CGCD1HD13109.4°109.5°
CD2CGHG110.8°109.5°
CGCD2HD21109.5°109.4°
CGCD2HD22109.5°109.5°
CGCD2HD23109.5°109.5°
HD11CD1HD12109.5°109.5°
HD11CD1HD13109.5°109.4°
HD12CD1HD13109.5°109.5°
HD21CD2HD22109.5°109.5°
HD21CD2HD23109.5°109.5°
HD22CD2HD23109.4°109.5°
C21C11H11109.9°109.5°
C21C11H12109.9°109.5°
C11C21C31112.4°109.5°
C11C21H211108.5°109.5°
C11C21H221108.5°109.5°
C21C11S1108.3°109.5°
H11C11H12109.1°109.5°
H11C11S1109.8°109.5°
H12C11S1109.9°109.5°
C31C21H211108.5°109.4°
C31C21H221108.5°109.5°
C21C31N2111.7°109.5°
C21C31C4113.6°109.5°
C21C31H3105.2°109.4°
H211C21H221110.4°109.4°
N2C31C4110.1°109.5°
N2C31H3109.0°109.5°
C31N2HN2119.1°120.0°
C31N2C121.8°120.0°
C4C31H3107.0°109.5°
C31C4C51112.5°109.5°
C31C4H41108.5°109.5°
C31C4H42108.5°109.5°
HN2N2C119.1°120.0°
C51C4H41108.4°109.5°
C51C4H42108.5°109.4°
C4C51C1'112.5°109.5°
C4C51H511108.5°109.4°
C4C51H521108.4°109.4°
H41C4H42110.5°109.4°
C1'C51H511108.5°109.5°
C1'C51H521108.5°109.5°
C51C1'C2'120.2°120.0°
C51C1'C6'120.4°120.0°
H511C51H521110.5°109.5°
C2'C1'C6'119.3°120.0°
C1'C2'C3'119.7°120.0°
C1'C2'H2'120.1°120.0°
C1'C6'C5'120.7°120.0°
C1'C6'H6'119.6°120.0°
C3'C2'H2'120.1°120.0°
C2'C3'C4'120.1°120.0°
C2'C3'H3'120.0°120.0°
C4'C3'H3'119.9°120.0°
C3'C4'C5'120.5°120.0°
C3'C4'H4'119.7°120.0°
C5'C4'H4'119.7°120.1°
C4'C5'C6'119.7°120.0°
C4'C5'H5'120.1°120.0°
C6'C5'H5'120.2°120.0°
C5'C6'H6'119.6°120.0°
C22C12C61119.9°120.0°
C22C12H1120.0°120.0°
C12C22C32120.5°120.0°
C12C22H2119.7°120.0°
C61C12H1120.0°120.0°
C12C61C52120.0°120.0°
C12C61H6120.0°120.0°
C32C22H2119.8°120.0°
C22C32C41121.2°120.0°
C22C32H33119.4°120.0°
C41C32H33119.4°120.0°
C32C41S1120.8°120.0°
C32C41C52116.7°120.0°
S1C41C52119.5°120.0°
C41S1O11106.2°104.3°
C41S1O2103.3°104.3°
C41S1C11104.5°104.5°
C41C52C61121.7°120.0°
C41C52H5119.2°120.0°
O11S1O2109.9°121.0°
O11S1C11119.6°110.5°
O2S1C11111.8°110.6°
C61C52H5119.1°120.0°
C52C61H6120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1N1C2C6172.7°179.7°
N1C1O1N174.1°180.0°
C1N1C2C3140.8°128.8°
C1N1C2H2199.2°111.5°
C1N1C2H2220.8°9.1°
C1N1C6C5144.5°128.9°
C1N1C6H6124.5°9.1°
C1N1C6H6295.5°111.5°
N1C1NCA179.8°175.1°
N1C1NH0.2°5.0°
C2N1C1O13.0°5.1°
N1C2C3H21120.0°119.7°
N1C2C3H22120.0°119.8°
N1C2H21H22118.5°120.5°
N1C2C3N453.8°53.8°
N1C2C3H31173.8°173.8°
N1C2C3H3266.2°66.2°
C2N1C6C542.9°50.8°
C2N1C6H61162.9°170.6°
C2N1C6H6277.1°68.8°
C2N1C1N177.0°174.9°
C6N1C1O1169.1°174.6°
C6N1C2C346.4°50.9°
C6N1C2H2173.6°68.8°
C6N1C2H22166.4°170.6°
N1C6C5N447.7°53.6°
N1C6C5H61120.0°119.8°
N1C6C5H62120.0°119.7°
N1C6C5H51167.7°173.6°
N1C6C5H5272.3°66.4°
N1C6H61H62118.4°120.5°
C6N1C1N5.0°5.4°
O1C1NCA6.2°4.9°
O1C1NH173.8°175.0°
C3C2H21H22118.5°120.5°
C2C3N4H31120.0°120.0°
C2C3N4H32120.0°119.9°
C2C3H31H32119.8°120.0°
C2C3N4C560.0°63.1°
C2C3N4HN460.0°61.0°
H21C2C3N466.3°65.9°
H21C2C3H3153.8°54.1°
H21C2C3H32173.8°174.2°
H22C2C3N4173.8°173.6°
H22C2C3H3166.2°66.4°
H22C2C3H3253.8°53.6°
N4C3H31H32119.9°120.1°
C3N4C5HN4120.0°124.1°
C3N4C5C657.1°63.0°
C3N4C5H51177.0°177.0°
C3N4C5H5263.0°56.9°
H31C3N4C5180.0°176.9°
H31C3N4HN460.0°59.0°
H32C3N4C559.9°56.9°
H32C3N4HN4180.0°179.0°
N4C5C6H51120.0°120.0°
N4C5C6H52120.0°120.0°
N4C5H51H52119.2°120.1°
N4C5C6H61167.7°173.4°
N4C5C6H6272.3°66.2°
HN4N4C5C662.9°61.2°
HN4N4C5H5157.1°58.9°
HN4N4C5H52177.1°179.0°
C6C5H51H52119.2°119.9°
C5C6H61H62118.4°120.2°
H51C5C6H6172.3°66.6°
H51C5C6H6247.7°53.8°
H52C5C6H6147.7°53.5°
H52C5C6H62167.7°173.9°
CANHC1180.0°179.9°
NCACCB121.3°120.0°
NCACHA119.5°120.0°
NCACBHA119.5°120.0°
NCACO46.4°17.8°
NCACBCG86.6°174.8°
NCACBHB233.4°54.8°
NCACBHB3153.4°65.2°
NCACN2127.6°162.2°
HNCAC118.1°29.2°
HNCACB1.7°90.8°
HNCAHA120.9°149.2°
CCACBHA121.0°119.9°
CACON2173.6°180.0°
CCACBCG154.0°65.2°
CCACBHB286.0°174.8°
CCACBHB334.0°54.8°
CACN2C31178.8°175.1°
CACN2HN21.2°4.9°
CCANC161.9°150.7°
CBCACO74.9°102.2°
CACBCGHB2120.0°120.0°
CACBCGHB3120.0°120.0°
CACBHB2HB3115.0°120.0°
CACBCGCD14.0°65.1°
CACBCGCD2129.7°175.0°
CACBCGHG110.5°54.9°
CBCANC1178.3°89.3°
CBCACN2111.1°77.8°
HACACO166.0°137.8°
HACACBCG33.0°54.8°
HACACBHB2153.0°65.3°
HACACBHB387.0°174.7°
HACANC159.1°30.7°
HACACN28.1°42.2°
OCN2C317.4°4.9°
OCN2HN2172.6°175.1°
CGCBHB2HB3115.0°120.0°
CBCGCD1CD2123.2°120.0°
CBCGCD1HG117.4°120.0°
CBCGCD2HG118.2°120.0°
CBCGCD1HD11180.0°175.5°
CBCGCD1HD1260.0°55.4°
CBCGCD1HD1360.0°64.6°
CBCGCD2HD21180.0°60.0°
CBCGCD2HD2260.0°180.0°
CBCGCD2HD2360.0°60.0°
HB2CBCGCD1116.1°54.9°
HB2CBCGCD29.7°65.1°
HB2CBCGHG129.5°174.9°
HB3CBCGCD1124.0°175.0°
HB3CBCGCD2110.3°55.0°
HB3CBCGHG9.5°65.0°
CD1CGCD2HG114.7°120.0°
CGCD1HD11HD12120.0°120.1°
CGCD1HD11HD13120.0°120.0°
CGCD1HD12HD13120.0°120.1°
CD1CGCD2HD2152.9°180.0°
CD1CGCD2HD2267.1°60.0°
CD1CGCD2HD23172.9°60.0°
CD2CGCD1HD1156.8°64.6°
CD2CGCD1HD12176.7°175.4°
CD2CGCD1HD1363.3°55.4°
CGCD2HD21HD22120.0°120.0°
CGCD2HD21HD23120.0°120.0°
CGCD2HD22HD23120.0°120.0°
HGCGCD1HD1162.6°55.5°
HGCGCD1HD1257.4°64.6°
HGCGCD1HD13177.4°175.4°
HGCGCD2HD2161.8°60.0°
HGCGCD2HD22178.2°60.0°
HGCGCD2HD2358.2°180.0°
HD11CD1HD12HD13120.0°119.9°
HD21CD2HD22HD23120.0°120.0°
C21C11H11H12120.5°120.0°
C21C11H11S1119.0°120.0°
C21C11H12S1119.0°120.0°
C11C21C31H211120.0°120.0°
C11C21C31H221120.0°120.1°
C11C21H211H221118.8°120.0°
C11C21C31N270.1°65.0°
C11C21C31C455.1°175.0°
C11C21C31H3171.8°55.0°
C21C11S1C41156.6°180.0°
C21C11S1O1184.9°68.3°
C21C11S1O245.5°68.3°
H11C11H12S1120.5°120.0°
H11C11C21C316.5°60.0°
H11C11C21H211126.5°60.0°
H11C11C21H221113.5°179.9°
H11C11S1C4136.6°60.0°
H11C11S1O11155.2°171.7°
H11C11S1O274.4°51.6°
H12C11C21C31126.5°60.0°
H12C11C21H211113.5°180.0°
H12C11C21H2216.5°60.0°
H12C11S1C4183.4°60.0°
H12C11S1O1135.2°51.7°
H12C11S1O2165.5°171.7°
C31C21H211H221118.8°120.0°
C21C31N2C4127.1°120.0°
C21C31N2H3115.8°120.0°
C21C31C4H3115.6°120.0°
C21C31N2HN269.5°25.0°
C21C31C4C51168.1°175.0°
C21C31C4H4172.0°65.0°
C21C31C4H4248.1°55.0°
C21C31N2C110.5°155.0°
C31C21C11S1113.5°180.0°
H211C21C31N2169.9°55.0°
H211C21C31C464.8°65.0°
H211C21C31H351.8°175.0°
H211C21C11S16.5°60.0°
H221C21C31N249.9°175.0°
H221C21C31C4175.2°55.0°
H221C21C31H368.2°65.1°
H221C21C11S1126.5°60.0°
N2C31C4H3118.4°120.0°
C31N2HN2C180.0°180.0°
N2C31C4C5165.9°65.0°
N2C31C4H4154.1°55.0°
N2C31C4H42174.2°175.0°
C4C31N2HN257.7°95.0°
C31C4C51H41120.0°120.1°
C31C4C51H42120.0°120.0°
C31C4H41H42118.8°120.0°
C31C4C51C1'176.0°180.0°
C31C4C51H51164.0°60.0°
C31C4C51H52156.0°60.0°
C4C31N2C122.3°85.0°
H3C31N2HN2174.7°145.0°
H3C31C4C5152.5°55.0°
H3C31C4H41172.5°175.0°
H3C31C4H4267.5°65.0°
H3C31N2C5.3°35.0°
C51C4H41H42118.7°119.9°
C4C51C1'H511120.0°120.0°
C4C51C1'H521120.0°120.0°
C4C51H511H521118.7°120.0°
C4C51C1'C2'103.7°90.0°
C4C51C1'C6'72.2°90.2°
H41C4C51C1'56.0°59.9°
H41C4C51H511176.0°179.9°
H41C4C51H52164.0°60.1°
H42C4C51C1'64.0°60.0°
H42C4C51H51156.0°60.0°
H42C4C51H521176.0°180.0°
C1'C51H511H521118.8°120.0°
C51C1'C2'C6'176.0°179.8°
C51C1'C2'C3'175.3°180.0°
C51C1'C2'H2'4.7°0.0°
C51C1'C6'C5'175.2°179.8°
C51C1'C6'H6'4.8°0.1°
H511C51C1'C2'136.3°30.0°
H511C51C1'C6'47.8°149.8°
H521C51C1'C2'16.3°150.0°
H521C51C1'C6'167.8°29.8°
C1'C2'C3'H2'180.0°180.0°
C1'C2'C3'C4'0.2°0.0°
C1'C2'C3'H3'179.8°179.9°
C2'C1'C6'C5'0.8°0.5°
C2'C1'C6'H6'179.2°179.7°
C6'C1'C2'C3'0.7°0.2°
C6'C1'C2'H2'179.3°179.8°
C1'C6'C5'C4'0.4°0.5°
C1'C6'C5'H6'180.0°179.8°
C1'C6'C5'H5'179.6°179.8°
C2'C3'C4'H3'180.0°180.0°
C2'C3'C4'C5'0.2°0.0°
C2'C3'C4'H4'179.8°179.9°
H2'C2'C3'C4'179.7°180.0°
H2'C2'C3'H3'0.2°0.0°
C3'C4'C5'H4'180.0°179.9°
C3'C4'C5'C6'0.1°0.2°
C3'C4'C5'H5'179.9°180.0°
H3'C3'C4'C5'179.8°179.9°
H3'C3'C4'H4'0.2°0.0°
C4'C5'C6'H5'180.0°179.8°
C4'C5'C6'H6'179.6°179.7°
H4'C4'C5'C6'179.9°179.8°
H4'C4'C5'H5'0.1°0.1°
H5'C5'C6'H6'0.3°0.0°
C22C12C61H1180.0°179.7°
C12C22C32H2180.0°180.0°
C12C22C32C410.9°0.0°
C12C22C32H33179.2°180.0°
C22C12C61C520.0°0.0°
C22C12C61H6180.0°180.0°
C61C12C22C320.5°0.0°
C61C12C22H2179.5°180.0°
C12C61C52C410.3°0.0°
C12C61C52H6180.0°180.0°
C12C61C52H5179.7°180.0°
H1C12C22C32179.5°179.7°
H1C12C22H20.5°0.4°
H1C12C61C52180.0°179.7°
H1C12C61H60.0°0.3°
C22C32C41H33180.0°180.0°
C22C32C41S1160.9°180.0°
C22C32C41C520.6°0.0°
H2C22C32C41179.1°180.0°
H2C22C32H330.8°0.0°
C32C41S1C52159.7°180.0°
C32C41S1O1159.1°26.1°
C32C41S1O256.6°153.9°
C32C41C52C610.0°0.0°
C32C41C52H5179.9°180.0°
C32C41S1C11173.6°90.0°
H33C32C41S119.2°0.1°
H33C32C41C52179.4°180.0°
C41S1O11O2111.2°116.8°
C41S1O11C11117.6°111.8°
C41S1O2C11111.8°111.8°
S1C41C52C61160.6°180.0°
S1C41C52H519.4°0.0°
C52C41S1O11100.6°153.9°
C52C41S1O2143.7°26.1°
C41C52C61H5180.0°180.0°
C41C52C61H6179.7°180.0°
C52C41S1C1126.7°90.0°
O11S1O2C11135.2°131.5°
H5C52C61H60.2°0.0°

222415

PDB entries from 2024-07-10

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