Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

PRD_000226

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1doub1.21Å1.23Å
C1C2sing1.51Å1.54Å
N1C3sing1.47Å1.47Å
N1H1sing1.01Å1.00Å
N1H2sing1.01Å1.00Å
C2C3sing1.53Å1.53Å
C2H3sing1.09Å1.10Å
C2H4sing1.09Å1.10Å
C3C6sing1.53Å1.53Å
C3H5sing1.09Å1.10Å
C4C5sing1.53Å1.53Å
C4C6sing1.53Å1.53Å
C4H6sing1.09Å1.10Å
C4H7sing1.09Å1.10Å
C5N2sing1.47Å1.47Å
C5H8sing1.09Å1.10Å
C5H9sing1.09Å1.10Å
C6H10sing1.09Å1.10Å
C6H11sing1.09Å1.10Å
N2H12sing1.01Å1.00Å
N2H13sing1.01Å1.00Å
N3C7sing1.46Å1.47Å
N3H14sing0.97Å1.00Å
C7C8sing1.51Å1.52Å
C7C9sing1.53Å1.54Å
C7H15sing1.10Å1.10Å
C8O2doub1.21Å1.24Å
C9N4sing1.48Å1.45Å
C9H16sing1.09Å1.10Å
C9H17sing1.09Å1.10Å
N4H18sing0.97Å1.00Å
N5C10sing1.48Å1.48Å
N5H19sing0.98Å1.00Å
C10C11sing1.50Å1.52Å
C10C12sing1.53Å1.53Å
C10H20sing1.10Å1.10Å
C11O3doub1.22Å1.23Å
C12O4sing1.43Å1.43Å
C12H21sing1.09Å1.10Å
C12H22sing1.09Å1.10Å
O4H23sing0.97Å0.95Å
N6C13sing1.48Å1.47Å
N6H24sing0.97Å1.00Å
C13C14sing1.52Å1.49Å
C13C15sing1.53Å1.54Å
C13H25sing1.09Å1.10Å
C14O5doub1.21Å1.28Å
C15O6sing1.43Å1.43Å
C15H26sing1.09Å1.10Å
C15H27sing1.09Å1.10Å
O6H28sing0.97Å0.95Å
C16O7doub1.22Å1.23Å
N7C18sing1.42Å1.30Å
N7H29sing0.99Å1.00Å
C17O8doub1.22Å1.24Å
N8C17sing1.35Å1.29Å
N8C19sing1.38Å1.32Å
N9C17sing1.35Å1.35Å
N9H30sing0.97Å1.00Å
N9H31sing0.97Å1.00Å
C18C16sing1.47Å1.51Å
C18C19doub1.34Å1.44Å
C19H32sing1.08Å1.08Å
N8H33sing0.97Å1.00Å
C20C21sing1.51Å1.50Å
N10C21sing1.48Å1.46Å
N10H34sing0.97Å1.00Å
O9C20doub1.21Å1.26Å
C21C22sing1.53Å1.54Å
C21H35sing1.09Å1.10Å
C22C24sing1.54Å1.53Å
C22H36sing1.09Å1.10Å
N11C22sing1.47Å1.47Å
N11C23sing1.37Å1.40Å
N11H37sing0.97Å1.00Å
C23N13doub1.29Å1.40Å
N12C23sing1.37Å1.33Å
N12H38sing0.97Å1.00Å
N12H39sing0.97Å1.00Å
C24H40sing1.09Å1.10Å
C24H41sing1.09Å1.10Å
N13C25sing1.46Å1.47Å
C25C24sing1.53Å1.53Å
C25O10sing1.43Å1.43Å
C25H42sing1.09Å1.10Å
O10H43sing0.97Å0.95Å
C1N3sing1.35Å1.33Å
C8N5sing1.37Å1.32Å
C16N10sing1.36Å1.36Å
C11N6sing1.36Å1.34Å
N4C20sing1.37Å1.34Å
C14N7sing1.36Å1.34Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2121.7°120.1°
O1C1N3124.8°119.9°
C1C2C3113.6°109.5°
C1C2H3108.4°109.5°
C1C2H4108.4°109.5°
C2C1N3113.4°120.0°
C3N1H1109.5°111.0°
C3N1H2109.5°110.9°
N1C3C2110.0°109.5°
N1C3C6109.9°109.5°
N1C3H5109.3°109.4°
H1N1H2109.5°111.0°
C3C2H3108.4°109.5°
C3C2H4108.4°109.4°
C2C3C6110.6°109.5°
C2C3H5108.5°109.4°
H3C2H4109.5°109.4°
C6C3H5108.5°109.5°
C3C6C4111.1°109.5°
C3C6H10109.1°109.4°
C3C6H11109.1°109.5°
C5C4C6111.3°109.4°
C5C4H6109.0°109.4°
C5C4H7109.0°109.5°
C4C5N2110.0°109.5°
C4C5H8109.3°109.5°
C4C5H9109.3°109.4°
C6C4H6109.0°109.5°
C6C4H7109.0°109.5°
C4C6H10109.1°109.5°
C4C6H11109.0°109.5°
H6C4H7109.5°109.5°
N2C5H8109.3°109.5°
N2C5H9109.3°109.5°
C5N2H12109.5°111.0°
C5N2H13109.4°111.0°
H8C5H9109.5°109.5°
H10C6H11109.5°109.5°
H12N2H13109.5°111.0°
C7N3H14118.2°120.0°
N3C7C8110.3°109.7°
N3C7C9107.7°110.5°
N3C7H15110.4°108.9°
C7N3C1123.6°120.0°
H14N3C1118.2°120.0°
C8C7C9109.0°110.1°
C8C7H15109.7°108.6°
C7C8O2121.1°120.2°
C7C8N5115.7°117.5°
C9C7H15109.6°109.0°
C7C9N4111.3°109.8°
C7C9H16109.0°109.4°
C7C9H17109.0°109.6°
O2C8N5123.1°122.3°
N4C9H16109.0°109.7°
N4C9H17109.0°109.4°
C9N4H18118.8°123.4°
C9N4C20122.5°114.9°
H16C9H17109.5°109.0°
H18N4C20118.8°121.7°
C10N5H19118.9°121.6°
N5C10C11108.6°109.7°
N5C10C12110.6°110.1°
N5C10H20110.5°108.8°
C10N5C8122.2°117.1°
H19N5C8118.9°121.2°
C11C10C12107.7°110.9°
C11C10H20109.8°108.7°
C10C11O3120.6°119.8°
C10C11N6115.4°120.3°
C12C10H20109.6°108.7°
C10C12O4109.5°109.5°
C10C12H21109.5°109.5°
C10C12H22109.5°109.5°
O3C11N6124.0°119.9°
O4C12H21109.4°109.5°
O4C12H22109.4°109.4°
C12O4H23109.5°114.0°
H21C12H22109.5°109.5°
C13N6H24120.0°120.6°
N6C13C14109.0°108.0°
N6C13C15108.0°109.7°
N6C13H25111.0°110.1°
C13N6C11120.0°116.6°
H24N6C11120.0°122.8°
C14C13C15108.2°109.2°
C14C13H25110.7°109.5°
C13C14O5119.3°118.8°
C13C14N7117.0°116.7°
C15C13H25109.9°110.2°
C13C15O6109.1°109.4°
C13C15H26109.6°109.5°
C13C15H27109.6°109.5°
O5C14N7123.6°124.5°
O6C15H26109.6°109.5°
O6C15H27109.5°109.5°
C15O6H28109.5°114.0°
H26C15H27109.5°109.5°
O7C16C18123.3°118.6°
O7C16N10124.1°119.9°
C18N7H29115.6°119.2°
N7C18C16119.4°115.7°
N7C18C19122.8°124.1°
C18N7C14128.8°121.2°
H29N7C14115.6°119.6°
O8C17N8126.5°120.0°
O8C17N9111.9°120.0°
C17N8C19118.7°120.0°
N8C17N9121.6°120.0°
C17N8H33120.6°120.0°
N8C19C18119.8°120.0°
N8C19H32120.1°120.0°
C19N8H33120.7°120.0°
C17N9H30120.0°120.0°
C17N9H31120.0°120.0°
H30N9H31120.0°120.0°
C16C18C19117.7°120.2°
C18C16N10112.6°121.5°
C18C19H32120.1°120.0°
C20C21N10110.3°108.0°
C21C20O9120.2°120.9°
C20C21C22110.2°109.7°
C20C21H35108.1°109.8°
C21C20N4117.3°117.9°
C21N10H34119.3°121.4°
N10C21C22111.9°109.5°
N10C21H35108.6°109.7°
C21N10C16121.5°115.4°
H34N10C16119.2°123.2°
O9C20N4122.5°121.2°
C22C21H35107.6°110.0°
C21C22C24113.2°109.9°
C21C22H36107.7°109.9°
C21C22N11109.7°109.9°
C24C22H36107.8°109.9°
C24C22N11109.7°107.3°
C22C24H40109.3°109.7°
C22C24H41109.3°109.6°
C22C24C25110.0°108.5°
H36C22N11108.5°109.9°
C22N11C23120.7°118.7°
C22N11H37119.7°120.6°
C23N11H37119.6°120.7°
N11C23N13120.8°122.3°
N11C23N12119.5°118.8°
N13C23N12119.7°118.9°
C23N13C25121.3°123.8°
C23N12H38120.0°120.0°
C23N12H39120.0°120.0°
H38N12H39120.0°120.0°
H40C24H41109.5°109.6°
H40C24C25109.3°109.6°
H41C24C25109.3°109.8°
N13C25C24109.4°110.6°
N13C25O10109.1°109.3°
N13C25H42109.6°109.2°
C24C25O10109.7°109.3°
C24C25H42108.8°109.3°
O10C25H42110.2°109.2°
C25O10H43109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2N3179.4°179.8°
O1C1C2C311.6°0.0°
O1C1C2H3109.0°120.0°
O1C1C2H4132.2°120.0°
O1C1N3C70.7°0.0°
O1C1N3H14179.3°180.0°
C1C2C3N158.5°65.0°
C1C2C3H3120.6°120.0°
C1C2C3H4120.6°120.0°
C1C2H3H4118.1°120.0°
C1C2C3C663.1°175.0°
C1C2C3H5178.0°55.0°
C2C1N3C7179.9°179.7°
C2C1N3H140.0°0.3°
C3N1H1H2120.0°123.9°
N1C3C2C6121.6°120.1°
N1C3C2H5119.5°119.9°
N1C3C2H3179.1°55.1°
N1C3C2H462.1°175.0°
N1C3C6H5119.5°120.0°
N1C3C6C465.7°65.0°
N1C3C6H1054.6°55.0°
N1C3C6H11174.1°175.0°
H1N1C3C2180.0°63.9°
H1N1C3C658.0°176.1°
H1N1C3H561.0°56.1°
H2N1C3C260.0°60.0°
H2N1C3C6178.0°60.0°
H2N1C3H559.1°180.0°
C3C2H3H4118.1°119.9°
C2C3C6H5118.9°120.0°
C2C3C6C4172.7°175.0°
C2C3C6H1067.1°65.0°
C2C3C6H1152.5°55.0°
C3C2C1N3169.1°179.7°
H3C2C3C657.5°65.0°
H3C2C3H561.4°175.0°
H3C2C1N370.3°59.7°
H4C2C3C6176.3°55.0°
H4C2C3H557.4°65.0°
H4C2C1N348.4°60.3°
C3C6C4C5176.6°180.0°
C3C6C4H10120.2°120.0°
C3C6C4H11120.2°120.0°
C3C6C4H663.2°60.0°
C3C6C4H756.3°60.0°
C3C6H10H11119.3°120.0°
H5C3C6C453.8°55.0°
H5C3C6H10174.0°175.0°
H5C3C6H1166.4°65.0°
C5C4C6H6120.3°120.0°
C5C4C6H7120.3°120.0°
C5C4H6H7119.1°120.0°
C4C5N2H8120.1°120.0°
C4C5N2H9120.1°120.0°
C4C5H8H9119.8°120.0°
C5C4C6H1063.2°60.0°
C5C4C6H1156.3°60.0°
C4C5N2H12180.0°56.0°
C4C5N2H1360.0°180.0°
C6C4H6H7119.2°120.1°
C6C4C5N2177.5°180.0°
C6C4C5H862.5°60.0°
C6C4C5H957.4°60.0°
C4C6H10H11119.2°120.0°
H6C4C5N262.2°60.0°
H6C4C5H857.8°60.0°
H6C4C5H9177.7°180.0°
H6C4C6H1057.1°59.9°
H6C4C6H11176.6°179.9°
H7C4C5N257.2°60.0°
H7C4C5H8177.3°NaN°
H7C4C5H962.9°60.0°
H7C4C6H10176.5°NaN°
H7C4C6H1164.0°60.0°
N2C5H8H9119.7°120.0°
C5N2H12H13120.0°124.0°
H8C5N2H1259.9°63.9°
H8C5N2H13179.9°60.0°
H9C5N2H1259.9°176.0°
H9C5N2H1360.1°60.0°
C7N3H14C1180.0°180.0°
N3C7C8C9118.1°121.8°
N3C7C8H15121.9°118.9°
N3C7C9H15120.2°119.6°
N3C7C8O261.8°93.8°
N3C7C9N4177.2°46.8°
N3C7C9H1662.5°167.2°
N3C7C9H1756.9°73.4°
N3C7C8N5116.5°85.7°
H14N3C7C846.0°95.0°
H14N3C7C972.9°26.6°
H14N3C7H15167.5°146.3°
C8C7C9H15120.1°119.0°
C7C8O2N5178.1°179.5°
C8C7C9N457.5°74.6°
C8C7C9H16177.8°45.8°
C8C7C9H1762.8°165.2°
C7C8N5C10178.8°173.4°
C7C8N5H191.3°6.5°
C8C7N3C1134.1°85.0°
C9C7C8O256.3°28.0°
C7C9N4H16120.3°120.2°
C7C9N4H17120.3°120.2°
C7C9H16H17119.1°119.8°
C7C9N4H1898.9°31.4°
C9C7N3C1107.0°153.4°
C9C7C8N5125.4°152.4°
C7C9N4C2081.1°149.3°
H15C7C8O2176.3°147.3°
H15C7C9N462.6°166.3°
H15C7C9H1657.7°73.3°
H15C7C9H17177.1°46.2°
H15C7N3C112.6°33.7°
H15C7C8N55.4°33.1°
O2C8N5C103.0°7.0°
O2C8N5H19177.0°173.0°
N4C9H16H17119.2°119.7°
C9N4H18C20180.0°179.3°
C9N4C20C21178.2°177.7°
C9N4C20O90.4°2.2°
H16C9N4H18140.8°151.6°
H16C9N4C2039.2°29.1°
H17C9N4H1821.4°88.8°
H17C9N4C20158.6°90.5°
H18N4C20C211.8°3.0°
H18N4C20O9179.6°177.2°
C10N5H19C8180.0°179.9°
N5C10C11C12119.8°121.8°
N5C10C11H20120.9°118.8°
N5C10C12H20122.0°119.0°
N5C10C11O34.9°19.7°
N5C10C12O469.2°65.0°
N5C10C12H21170.8°175.0°
N5C10C12H2250.8°55.0°
N5C10C11N6177.1°161.4°
H19N5C10C1179.1°123.6°
H19N5C10C1238.8°114.2°
H19N5C10H20160.4°4.8°
C11C10C12H20119.5°119.4°
C10C11O3N6177.8°178.9°
C11C10C12O449.3°56.6°
C11C10C12H2170.7°63.4°
C11C10C12H22169.3°176.6°
C10C11N6C13178.7°176.0°
C10C11N6H241.3°4.7°
C11C10N5C8100.9°56.5°
C12C10C11O3114.8°141.5°
C10C12O4H21120.0°120.1°
C10C12O4H22120.0°120.0°
C10C12H21H22120.0°120.0°
C10C12O4H23180.0°180.0°
C12C10N5C8141.2°65.7°
C12C10C11N663.1°39.6°
H20C10C11O3125.8°99.1°
H20C10C12O4168.7°176.0°
H20C10C12H2148.8°56.0°
H20C10C12H2271.3°64.0°
H20C10N5C819.6°175.2°
H20C10C11N656.2°79.8°
O3C11N6C133.4°5.1°
O3C11N6H24176.5°174.2°
O4C12H21H22120.0°119.9°
H21C12O4H2360.0°60.0°
H22C12O4H2359.9°60.0°
C13N6H24C11180.0°179.2°
N6C13C14C15117.2°119.3°
N6C13C14H25122.3°120.0°
N6C13C15H25121.2°121.4°
N6C13C14O5113.6°109.8°
N6C13C15O6173.7°65.0°
N6C13C15H2666.3°175.0°
N6C13C15H2753.8°55.0°
N6C13C14N767.6°70.8°
H24N6C13C14117.5°95.0°
H24N6C13C15125.2°24.0°
H24N6C13H254.7°145.4°
C14C13C15H25121.0°120.4°
C13C14O5N7178.7°179.3°
C14C13C15O655.9°53.2°
C14C13C15H26175.9°66.8°
C14C13C15H2764.0°173.2°
C13C14N7C18179.9°169.9°
C13C14N7H290.1°10.6°
C14C13N6C1162.5°85.7°
C15C13C14O5129.2°9.5°
C13C15O6H26120.0°120.0°
C13C15O6H27119.9°120.0°
C13C15H26H27120.2°120.0°
C13C15O6H28180.0°179.9°
C15C13N6C1154.8°155.3°
C15C13C14N749.5°169.9°
H25C13C14O58.7°130.2°
H25C13C15O665.1°173.6°
H25C13C15H2654.9°53.6°
H25C13C15H27175.0°66.4°
H25C13N6C11175.3°33.9°
H25C13C14N7170.0°49.2°
O5C14N7C181.4°10.7°
O5C14N7H29178.6°168.8°
O6C15H26H27120.1°120.0°
H26C15O6H2860.1°60.1°
H27C15O6H2860.0°59.9°
O7C16C18N7175.4°9.7°
O7C16C18N10178.6°177.3°
O7C16C18C194.6°170.5°
O7C16N10C211.3°13.7°
O7C16N10H34178.7°166.1°
C18N7H29C14180.0°179.5°
N7C18C19N80.1°35.7°
N7C18C16C19180.0°179.9°
N7C18C19H32179.9°144.3°
N7C18C16N103.2°167.7°
H29N7C18C160.1°4.5°
H29N7C18C19179.9°175.6°
O8C17N8N9178.4°180.0°
O8C17N8C191.6°0.0°
O8C17N9H300.0°0.0°
O8C17N9H31180.0°180.0°
O8C17N8H33178.4°180.0°
C17N8C19H33180.0°180.0°
N8C17N9H30178.6°180.0°
N8C17N9H311.4°0.0°
C17N8C19C18179.8°173.1°
C17N8C19H320.2°6.9°
C19N8C17N9180.0°180.0°
N8C19C18C16180.0°144.2°
N8C19C18H32180.0°180.0°
C17N9H30H31180.0°180.0°
N9C17N8H330.0°0.0°
C16C18C19H320.0°35.8°
C18C16N10C21179.9°163.6°
C18C16N10H340.1°16.6°
C16C18N7C14179.9°176.0°
C18C19N8H330.2°7.0°
C19C18C16N10176.8°12.2°
C19C18N7C140.0°3.9°
H32C19N8H33179.9°173.0°
C20C21N10C22123.1°119.4°
C20C21N10H35118.3°119.7°
C20C21N10H3468.2°115.6°
C21C20O9N4177.7°179.9°
C20C21C22H35117.6°120.9°
C20C21C22C24171.3°64.4°
C20C21C22H3652.2°56.7°
C20C21C22N1165.8°177.8°
C20C21N10C16111.8°64.6°
C21N10H34C16180.0°179.7°
N10C21C20O9146.2°84.2°
N10C21C22H35119.2°120.7°
N10C21C22C2465.5°177.2°
N10C21C22H36175.3°61.7°
N10C21C22N1157.4°59.4°
N10C21C20N436.0°95.7°
H34N10C21C2254.9°3.8°
H34N10C21H35173.5°124.6°
O9C20C21C2222.1°35.1°
O9C20C21H3595.2°156.1°
C21C22C24H36119.1°121.0°
C21C22C24N11122.9°119.4°
C21C22H36N11118.7°121.1°
C21C22N11C2395.8°77.1°
C21C22N11H3784.2°102.8°
C21C22C24H40173.7°179.8°
C21C22C24H4153.9°59.9°
C21C22C24C2566.2°60.0°
C22C21N10C16125.1°176.0°
C22C21C20N4160.1°145.0°
H35C21C22C2453.7°56.5°
H35C21C22H3665.5°177.6°
H35C21C22N11176.6°61.4°
H35C21N10C166.5°55.1°
H35C21C20N482.6°24.0°
C24C22H36N11118.8°117.9°
C24C22N11C2329.2°42.3°
C24C22N11H37150.8°137.8°
C22C24H40H41119.7°120.4°
C22C24H40C25120.5°119.0°
C22C24H41C25120.5°119.1°
C22C24C25N1356.0°49.4°
C22C24C25O10175.6°169.7°
C22C24C25H4263.7°70.9°
H36C22N11C23146.8°161.8°
H36C22N11H3733.2°18.3°
H36C22C24H4054.7°59.2°
H36C22C24H4165.2°61.1°
H36C22C24C25174.8°178.9°
C22N11C23H37180.0°179.9°
C22N11C23N130.6°13.0°
C22N11C23N12178.1°167.1°
N11C22C24H4063.4°60.3°
N11C22C24H41176.8°179.3°
N11C22C24C2556.7°59.4°
N11C23N13N12178.6°180.0°
N11C23N12H38178.7°0.0°
N11C23N12H391.4°180.0°
N11C23N13C250.1°1.0°
H37N11C23N13179.4°167.1°
H37N11C23N121.9°12.8°
N13C23N12H380.0°180.0°
N13C23N12H39180.0°0.0°
C23N13C25C2428.2°20.8°
C23N13C25O10148.2°141.1°
C23N13C25H4291.1°99.5°
C23N12H38H39180.0°180.0°
N12C23N13C25178.5°179.0°
H40C24H41C25119.8°120.5°
H40C24C25N1364.0°70.3°
H40C24C25O1055.6°50.0°
H40C24C25H42176.2°169.4°
H41C24C25N13176.1°169.2°
H41C24C25O1064.3°70.5°
H41C24C25H4256.4°49.0°
N13C25C24O10119.6°120.3°
N13C25C24H42119.8°120.3°
N13C25O10H42120.4°119.4°
N13C25O10H43180.0°60.0°
C24C25O10H42119.8°119.5°
C24C25O10H4360.2°178.9°
H42C25O10H4359.6°59.5°

246704

PDB entries from 2025-12-24

PDB statisticsPDBj update infoContact PDBjnumon