Author results

1IYX
  • Download 1iyx
  • View 1iyx
Molmil generated image of 1iyx
CRYSTAL STRUCTURE OF ENOLASE FROM ENTEROCOCCUS HIRAE
Descriptor:ENOLASE, MAGNESIUM ION, SULFATE ION, ...
Authors:Hosaka, T., Meguro, T., Yamato, I., Shirakihara, Y.
Deposit date:2002-09-12
Release date:2003-07-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Enterococcus hirae Enolase at 2.8 A Resolution
J.BIOCHEM.(TOKYO), 133, 2003
2BL2
  • Download 2bl2
  • View 2bl2
Molmil generated image of 2bl2
THE MEMBRANE ROTOR OF THE V-TYPE ATPASE FROM ENTEROCOCCUS HIRAE
Descriptor:V-TYPE SODIUM ATP SYNTHASE SUBUNIT K, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, SODIUM ION, ...
Authors:Murata, T., Yamato, I., Kakinuma, Y., Leslie, A.G.W., Walker, J.E.
Deposit date:2005-02-25
Release date:2005-04-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the Rotor of the Vacuolar-Type Na- ATPase from Enterococcus Hirae
Science, 308, 2005
2CYD
  • Download 2cyd
  • View 2cyd
Molmil generated image of 2cyd
CRYSTAL STRUCTURE OF LITHIUM BOUND ROTOR RING OF THE V-ATPASE FROM ENTEROCOCCUS HIRAE
Descriptor:V-type sodium ATP synthase subunit K, LITHIUM ION, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Murata, T., Yamato, I., Kakinuma, Y., Shirouzu, M., Walker, J.E., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-06
Release date:2006-06-27
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Lithium bound rotor ring of the V-ATPase from Enterococcus hirae
To be Published
2DB4
  • Download 2db4
  • View 2db4
Molmil generated image of 2db4
CRYSTAL STRUCTURE OF ROTOR RING WITH DCCD OF THE V- ATPASE FROM ENTEROCOCCUS HIRAE
Descriptor:V-Type Sodium ATPase Subunit K, DICYCLOHEXYLUREA, SODIUM ION, ...
Authors:Murata, T., Yamato, I., Kakinuma, Y., Shirouzu, M., Walker, J.E., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-15
Release date:2006-12-05
Last modified:2012-05-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the rotor ring modified with N,N'-dicyclohexylcarbodiimide of the Na+-transporting vacuolar ATPase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3AON
  • Download 3aon
  • View 3aon
Molmil generated image of 3aon
CRYSTAL STRUCTURE OF THE CENTRAL AXIS (NTPD-NTPG) IN THE CATALYTIC PORTION OF ENTEROCOCCUS HIRAE V-TYPE SODIUM ATPASE
Descriptor:V-type sodium ATPase subunit D, V-type sodium ATPase subunit G, NITRATE ION
Authors:Saijo, S., Arai, S., Hossain, K.M.M., Yamato, I., Kakinuma, Y., Ishizuka-Katsura, Y., Terada, T., Shirouzu, M., Yokoyama, S., Iwata, S., Murata, T.
Deposit date:2010-10-04
Release date:2011-10-05
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the central axis DF complex of the prokaryotic V-ATPase
Proc.Natl.Acad.Sci.USA, 108, 2011
3AOU
  • Download 3aou
  • View 3aou
Molmil generated image of 3aou
STRUCTURE OF THE NA+ UNBOUND ROTOR RING MODIFIED WITH N,N F-DICYCLOHEXYLCARBODIIMIDE OF THE NA+-TRANSPORTING V-ATPASE
Descriptor:V-type sodium ATPase subunit K, DICYCLOHEXYLUREA, UNDECYL-MALTOSIDE
Authors:Mizutani, K., Yamamoto, M., Yamato, I., Kakinuma, Y., Shirouzu, M., Yokoyama, S., Iwata, S., Murata, T.
Deposit date:2010-10-06
Release date:2011-08-17
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Structure of the rotor ring modified with N,N'-dicyclohexylcarbodiimide of the Na+-transporting vacuolar ATPase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3VH9
  • Download 3vh9
  • View 3vh9
Molmil generated image of 3vh9
CRYSTAL STRUCTURE OF AEROMONAS PROTEOLYTICA AMINOPEPTIDASE COMPLEXED WITH 8-QUINOLINOL
Descriptor:Bacterial leucyl aminopeptidase, ZINC ION, quinolin-8-ol, ...
Authors:Saijo, S., Hanaya, K., Suetsugu, M., Kobayashi, K., Yamato, I., Aoki, S.
Deposit date:2011-08-24
Release date:2012-05-02
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Potent inhibition of dinuclear zinc(II) peptidase, an aminopeptidase from Aeromonas proteolytica, by 8-quinolinol derivatives: inhibitor design based on Zn(2+) fluorophores, kinetic, and X-ray crystallographic study.
J.Biol.Inorg.Chem., 17, 2012
3VR2
  • Download 3vr2
  • View 3vr2
Molmil generated image of 3vr2
CRYSTAL STRUCTURE OF NUCLEOTIDE-FREE A3B3 COMPLEX FROM ENTEROCOCCUS HIRAE V-ATPASE [EA3B3]
Descriptor:V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B
Authors:Arai, S., Saijo, S., Suzuki, K., Mizutani, K., Kakinuma, Y., Ishizuka-Katsura, Y., Ohsawa, N., Terada, T., Shirouzu, M., Yokoyama, S., Iwata, S., Yamato, I., Murata, T.
Deposit date:2012-04-03
Release date:2013-01-16
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
3VR3
  • Download 3vr3
  • View 3vr3
Molmil generated image of 3vr3
CRYSTAL STRUCTURE OF AMP-PNP BOUND A3B3 COMPLEX FROM ENTEROCOCCUS HIRAE V-ATPASE [BA3B3]
Descriptor:V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Arai, S., Saijo, S., Suzuki, K., Mizutani, K., Kakinuma, Y., Ishizuka-Katsura, Y., Ohsawa, N., Terada, T., Shirouzu, M., Yokoyama, S., Iwata, S., Yamato, I., Murata, T.
Deposit date:2012-04-03
Release date:2013-01-16
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
3VR4
  • Download 3vr4
  • View 3vr4
Molmil generated image of 3vr4
CRYSTAL STRUCTURE OF ENTEROCOCCUS HIRAE V1-ATPASE [EV1]
Descriptor:V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B, V-type sodium ATPase subunit D, ...
Authors:Saijo, S., Arai, S., Suzuki, K., Mizutani, K., Kakinuma, Y., Ishizuka-Katsura, Y., Ohsawa, N., Terada, T., Shirouzu, M., Yokoyama, S., Iwata, S., Yamato, I., Murata, T.
Deposit date:2012-04-03
Release date:2013-01-09
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (2.172 Å)
Cite:Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
3VR5
  • Download 3vr5
  • View 3vr5
Molmil generated image of 3vr5
CRYSTAL STRUCTURE OF NUCLEOTIDE-FREE ENTEROCOCCUS HIRAE V1-ATPASE [EV1(L)]
Descriptor:V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B, V-type sodium ATPase subunit D, ...
Authors:Saijo, S., Arai, S., Suzuki, K., Mizutani, K., Kakinuma, Y., Ishizuka-Katsura, Y., Ohsawa, N., Terada, T., Shirouzu, M., Yokoyama, S., Iwata, S., Yamato, I., Murata, T.
Deposit date:2012-04-03
Release date:2013-01-16
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
3VR6
  • Download 3vr6
  • View 3vr6
Molmil generated image of 3vr6
CRYSTAL STRUCTURE OF AMP-PNP BOUND ENTEROCOCCUS HIRAE V1-ATPASE [BV1]
Descriptor:V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B, V-type sodium ATPase subunit D, ...
Authors:Arai, S., Saijo, S., Suzuki, K., Mizutani, K., Kakinuma, Y., Ishizuka-Katsura, Y., Ohsawa, N., Terada, T., Shirouzu, M., Yokoyama, S., Iwata, S., Yamato, I., Murata, T.
Deposit date:2012-04-03
Release date:2013-01-16
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
5KNB
  • Download 5knb
  • View 5knb
Molmil generated image of 5knb
CRYSTAL STRUCTURE OF THE 2 ADP-BOUND V1 COMPLEX
Descriptor:V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B, V-type sodium ATPase subunit D, ...
Authors:Suzuki, K., Mizutani, K., Maruyama, S., Shimono, K., Imai, F.L., Muneyuki, E., Kakinuma, Y., Ishizuka-Katsura, Y., Shirouzu, M., Yokoyama, S., Yamato, I., Murata, T.
Deposit date:2016-06-28
Release date:2016-11-02
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (3.251 Å)
Cite:Crystal structures of the ATP-binding and ADP-release dwells of the V1 rotary motor
Nat Commun, 7, 2016
5KNC
  • Download 5knc
  • View 5knc
Molmil generated image of 5knc
CRYSTAL STRUCTURE OF THE 3 ADP-BOUND V1 COMPLEX
Descriptor:V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B, V-type sodium ATPase subunit D, ...
Authors:Suzuki, K., Mizutani, K., Maruyama, S., Shimono, K., Imai, F.L., Muneyuki, E., Kakinuma, Y., Ishizuka-Katsura, Y., Shirouzu, M., Yokoyama, S., Yamato, I., Murata, T.
Deposit date:2016-06-28
Release date:2016-11-02
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (3.015 Å)
Cite:Crystal structures of the ATP-binding and ADP-release dwells of the V1 rotary motor
Nat Commun, 7, 2016
5KND
  • Download 5knd
  • View 5knd
Molmil generated image of 5knd
CRYSTAL STRUCTURE OF THE PI-BOUND V1 COMPLEX
Descriptor:V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B, V-type sodium ATPase subunit D, ...
Authors:Suzuki, K., Mizutani, K., Maruyama, S., Shimono, K., Imai, F.L., Muneyuki, E., Kakinuma, Y., Ishizuka-Katsura, Y., Shirouzu, M., Yokoyama, S., Yamato, I., Murata, T.
Deposit date:2016-06-28
Release date:2016-11-02
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (2.888 Å)
Cite:Crystal structures of the ATP-binding and ADP-release dwells of the V1 rotary motor
Nat Commun, 7, 2016
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2018 Protein Data Bank Japan