8D8P
| |
5CAB
| Structure of Leishmania nucleoside diphostate kinase mutant Del5-Cterm | Descriptor: | Nucleoside diphosphate kinase, SULFATE ION | Authors: | Vieira, P.S, de Giuseppe, P.O, de Oliveira, A.H.C, Murakami, M.T. | Deposit date: | 2015-06-29 | Release date: | 2015-10-14 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (2.953 Å) | Cite: | The role of the C-terminus and Kpn loop in the quaternary structure stability of nucleoside diphosphate kinase from Leishmania parasites. J.Struct.Biol., 192, 2015
|
|
5C7P
| |
5CAA
| |
4KPC
| Crystal structure of the nucleoside diphosphate kinase b from Leishmania braziliensis | Descriptor: | Nucleoside diphosphate kinase b, PHOSPHATE ION | Authors: | Vieira, P.S, Giuseppe, P.O, Santos, C.R, Cunha, E.M.F, de Oliveira, A.H.C, Murakami, M.T. | Deposit date: | 2013-05-13 | Release date: | 2014-07-09 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Crystal structure and biophysical characterization of the nucleoside diphosphate kinase from Leishmania braziliensis. Bmc Struct.Biol., 15, 2015
|
|
7KMN
| |
7KMP
| |
7KMM
| |
7KMQ
| |
7KMO
| |
7KNC
| |
7KN8
| Crystal structure of the GH74 xyloglucanase from Xanthomonas campestris (Xcc1752) | Descriptor: | 1,2-ETHANEDIOL, Cellulase, IODIDE ION, ... | Authors: | Araujo, E.A, Vieira, P.S, Murakami, M.T, Polikarpov, I. | Deposit date: | 2020-11-04 | Release date: | 2021-05-26 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors Nature Communications, 12, 2021
|
|
6UAU
| Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E102A mutant) from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaritriose and laminaribiose | Descriptor: | DI(HYDROXYETHYL)ETHER, Glyco_hydro_cc domain-containing protein, ZINC ION, ... | Authors: | Vieira, P.S, Cabral, L, Costa, P.A.C.R, Santos, C.R, Murakami, M.T. | Deposit date: | 2019-09-11 | Release date: | 2020-05-20 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol., 16, 2020
|
|
6UAT
| Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E102A mutant) from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaripentaose | Descriptor: | Glyco_hydro_cc domain-containing protein, ZINC ION, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose | Authors: | Vieira, P.S, Cabral, L, Costa, P.A.C.R, Santos, C.R, Murakami, M.T. | Deposit date: | 2019-09-11 | Release date: | 2020-05-20 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol., 16, 2020
|
|
6UNV
| |
6UAS
| Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E199A mutant) from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaripentaose | Descriptor: | DI(HYDROXYETHYL)ETHER, Glycoside Hydrolase, ZINC ION, ... | Authors: | Vieira, P.S, Cabral, L, Costa, P.A.C.R, Santos, C.R, Murakami, M.T. | Deposit date: | 2019-09-11 | Release date: | 2020-05-20 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (1.91 Å) | Cite: | Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol., 16, 2020
|
|
6N99
| Xylose isomerase 2F1 variant from Streptomyces sp. F-1 | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, MAGNESIUM ION, SULFATE ION, ... | Authors: | Miyamoto, R.Y, Vieira, P.S, Murakami, M.T, Zanphorlin, L.M. | Deposit date: | 2018-12-01 | Release date: | 2019-12-04 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal structure of a novel xylose isomerase from Streptomyces sp. F-1 revealed the presence of unique features that differ from conventional classes. Biochim Biophys Acta Gen Subj, 1864, 2020
|
|
6N98
| Xylose isomerase 1F1 variant from Streptomyces sp. F-1 | Descriptor: | MAGNESIUM ION, SULFATE ION, Xylose isomerase | Authors: | Miyamoto, R.Y, Vieira, P.S, Murakami, M.T, Zanphorlin, L.M. | Deposit date: | 2018-12-01 | Release date: | 2019-12-04 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Crystal structure of a novel xylose isomerase from Streptomyces sp. F-1 revealed the presence of unique features that differ from conventional classes. Biochim Biophys Acta Gen Subj, 1864, 2020
|
|
6BYI
| Crystal structure of the acid-base mutant (E477A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri | Descriptor: | Beta-mannosidase, beta-D-mannopyranose | Authors: | Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T. | Deposit date: | 2017-12-20 | Release date: | 2018-07-18 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structural basis of exo-beta-mannanase activity in the GH2 family. J. Biol. Chem., 293, 2018
|
|
6BYC
| Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri | Descriptor: | ACETATE ION, Beta-mannosidase, DI(HYDROXYETHYL)ETHER, ... | Authors: | Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T. | Deposit date: | 2017-12-20 | Release date: | 2018-07-18 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (1.897 Å) | Cite: | Structural basis of exo-beta-mannanase activity in the GH2 family. J. Biol. Chem., 293, 2018
|
|
6BYE
| Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri in complex with mannose | Descriptor: | ACETATE ION, Beta-mannosidase, beta-D-mannopyranose | Authors: | Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T. | Deposit date: | 2017-12-20 | Release date: | 2018-07-18 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.126 Å) | Cite: | Structural basis of exo-beta-mannanase activity in the GH2 family. J. Biol. Chem., 293, 2018
|
|
6BYG
| Crystal structure of the nucleophile mutant (E575A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri | Descriptor: | Beta-mannosidase, beta-D-mannopyranose | Authors: | Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T. | Deposit date: | 2017-12-20 | Release date: | 2018-07-18 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.999 Å) | Cite: | Structural basis of exo-beta-mannanase activity in the GH2 family. J. Biol. Chem., 293, 2018
|
|
6EBC
| OhrB (Organic Hydroperoxide Resistance protein) wild type from Chromobacterium violaceum and reduced by DTT | Descriptor: | 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, Organic hydroperoxide resistance protein | Authors: | Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S. | Deposit date: | 2018-08-06 | Release date: | 2020-02-12 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (1.87 Å) | Cite: | Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle Acs Catalysis, 2020
|
|
6EBG
| Ohr (Organic Hydroperoxide Resistance protein) mutant - C60S interacting with dihydrolipoamide | Descriptor: | (6S)-6,8-disulfanyloctanamide, Organic hydroperoxide resistance protein | Authors: | Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S. | Deposit date: | 2018-08-06 | Release date: | 2020-02-05 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle Acs Catalysis, 2020
|
|
6EBD
| OhrB (Organic Hydroperoxide Resistance protein) mutant (C60A) from Chromobacterium violaceum, interacting with dihydrolipoamide | Descriptor: | (6S)-6,8-disulfanyloctanamide, CHLORIDE ION, Organic hydroperoxide resistance protein | Authors: | Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S. | Deposit date: | 2018-08-06 | Release date: | 2020-02-12 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.61 Å) | Cite: | Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle Acs Catalysis, 2020
|
|