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6O96
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BU of 6o96 by Molmil
Dot1L bound to the H2BK120 Ubiquitinated nucleosome
Descriptor: DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Valencia-Sanchez, M.I, De Ioannes, P.E, Miao, W, Vasilyev, N, Chen, R, Nudler, E, Armache, J.-P, Armache, K.-J.
Deposit date:2019-03-13
Release date:2019-04-24
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural Basis of Dot1L Stimulation by Histone H2B Lysine 120 Ubiquitination.
Mol.Cell, 74, 2019
5F5W
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BU of 5f5w by Molmil
Crystal structure of the alpha subunit of glycyl tRNA synthetase (GlyRS) from Aquifex aeolicus in complex with an analog of glycyl adenylate (Gly-SA)
Descriptor: 5'-O-(glycylsulfamoyl)adenosine, Glycine--tRNA ligase alpha subunit
Authors:Valencia-Sanchez, M.I, Torres-Larios, A.
Deposit date:2015-12-04
Release date:2016-05-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural Insights into the Polyphyletic Origins of Glycyl tRNA Synthetases.
J.Biol.Chem., 291, 2016
7K6Q
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BU of 7k6q by Molmil
Active state Dot1 bound to the H4K16ac nucleosome
Descriptor: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Valencia-Sanchez, M.I, De Ioannes, P.E, Miao, W, Truong, D.M, Lee, R, Armache, J.-P, Boeke, J.D, Armache, K.-J.
Deposit date:2020-09-21
Release date:2021-02-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Regulation of the Dot1 histone H3K79 methyltransferase by histone H4K16 acetylation.
Science, 371, 2021
7K6P
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BU of 7k6p by Molmil
Active state Dot1 bound to the unacetylated H4 nucleosome
Descriptor: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Valencia-Sanchez, M.I, De Ioannes, P.E, Miao, W, Truong, D.M, Lee, R, Armache, J.-P, Boeke, J.D, Armache, K.-J.
Deposit date:2020-09-21
Release date:2021-02-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Regulation of the Dot1 histone H3K79 methyltransferase by histone H4K16 acetylation.
Science, 371, 2021
7LV9
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BU of 7lv9 by Molmil
Marseillevirus heterotrimeric (hexameric) nucleosome
Descriptor: DNA (96-MER), Histone doublet Beta-Alpha (Alpha), Histone doublet Beta-Alpha (Beta), ...
Authors:Valencia-Sanchez, M.I, Abini-Agbomson, S, Armache, K.-J.
Deposit date:2021-02-24
Release date:2021-05-05
Last modified:2021-05-26
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:The structure of a virus-encoded nucleosome.
Nat.Struct.Mol.Biol., 28, 2021
7LV8
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BU of 7lv8 by Molmil
Structure of the Marseillevirus nucleosome
Descriptor: DNA (123-MER), Histone doublet Beta-Alpha (Alpha), Histone doublet Beta-Alpha (Beta), ...
Authors:Valencia-Sanchez, M.I, Abini-Agbomson, S, Armache, K.-J.
Deposit date:2021-02-24
Release date:2021-05-05
Last modified:2021-05-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The structure of a virus-encoded nucleosome.
Nat.Struct.Mol.Biol., 28, 2021
8SVF
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BU of 8svf by Molmil
BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Descriptor: DNA/RNA (187-MER), DNA/RNA (327-MER), Histone H2A type 1, ...
Authors:Thomas, J.F, Valencia-Sanchez, M.I, Armache, K.-J.
Deposit date:2023-05-16
Release date:2023-08-30
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of histone H2A lysine 119 deubiquitination by Polycomb repressive deubiquitinase BAP1/ASXL1.
Sci Adv, 9, 2023

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