Author results

1EE8
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CRYSTAL STRUCTURE OF MUTM (FPG) PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:MUTM (FPG) PROTEIN, ZINC ION
Authors:Sugahara, M., Mikawa, T., Kumasaka, T., Yamamoto, M., Kato, R., Fukuyama, K., Inoue, Y., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2000-01-31
Release date:2001-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a repair enzyme of oxidatively damaged DNA, MutM (Fpg), from an extreme thermophile, Thermus thermophilus HB8.
EMBO J., 19, 2000
1J3B
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CRYSTAL STRUCTURE OF ATP-DEPENDENT PHOSPHOENOLPYRUVATE CARBOXYKINASE FROM THERMUS THERMOPHILUS HB8
Descriptor:ATP-dependent phosphoenolpyruvate carboxykinase, CALCIUM ION, PHOSPHATE ION, ...
Authors:Sugahara, M., Miyano, M., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-01-21
Release date:2003-02-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of ATP-dependent phosphoenolpyruvate carboxykinase from Thermus thermophilus HB8 showing the structural basis of induced fit and thermostability.
Acta Crystallogr.,Sect.D, 61, 2005
1UJN
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CRYSTAL STRUCTURE OF DEHYDROQUINATE SYNTHASE FROM THERMUS THERMOPHILUS HB8
Descriptor:dehydroquinate synthase
Authors:Sugahara, M., Yokoyama, S., Kuramitsu, S., Miyano, M., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-06
Release date:2003-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of dehydroquinate synthase from Thermus thermophilus HB8 showing functional importance of the dimeric state.
Proteins, 58, 2005
1VBK
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CRYSTAL STRUCTURE OF PH1313 FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:hypothetical protein PH1313, (4R)-2-METHYLPENTANE-2,4-DIOL
Authors:Sugahara, M., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-02-27
Release date:2005-04-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Purification, crystallization and preliminary crystallographic analysis of the putative thiamine-biosynthesis protein PH1313 from Pyrococcus horikoshii OT3
Acta Crystallogr.,Sect.F, 63, 2007
1XKV
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CRYSTAL STRUCTURE OF ATP-DEPENDENT PHOSPHOENOLPYRUVATE CARBOXYKINASE FROM THERMUS THERMOPHILUS HB8
Descriptor:ATP-dependent phosphoenolpyruvate carboxykinase, CALCIUM ION, PHOSPHATE ION, ...
Authors:Sugahara, M., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-09-29
Release date:2005-10-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of ATP-dependent phosphoenolpyruvate carboxykinase from Thermus thermophilus HB8 showing the structural basis of induced fit and thermostability.
Acta Crystallogr.,Sect.D, 61, 2005
3WE6
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CRYSTAL STRUCTURE OF ANTI-PROSTAGLANDIN E2 FAB FRAGMENT
Descriptor:mAb Fab H fragment, mAb Fab L fragment, ISOPROPYL ALCOHOL
Authors:Sugahara, M., Ago, H., Saino, H., Miyano, M.
Deposit date:2013-07-01
Release date:2014-07-02
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of anti-Prostaglandin E2 Fab fragment with Prostaglandin E2
To be Published
3WFH
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CRYSTAL STRUCTURE OF ANTI-PROSTAGLANDIN E2 FAB FRAGMENT PGE2 COMPLEX
Descriptor:mAb Fab H fragment, mAb Fab L fragment, (Z)-7-[(1R,2R,3R)-3-hydroxy-2-[(E,3S)-3-hydroxyoct-1-enyl]-5-oxo-cyclopentyl]hept-5-enoic acid
Authors:Sugahara, M., Ago, H., Saino, H., Miyano, M.
Deposit date:2013-07-19
Release date:2014-07-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of anti-Prostaglandin E2 Fab fragment with Prostaglandin E2
To be Published
3WHX
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CRYSTAL STRUCTURE OF ANTI-PROSTAGLANDIN E2 FAB FRAGMENT PGE1 COMPLEX
Descriptor:mAb Fab H fragment, mAb Fab L fragment, 7-[(1R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoic acid
Authors:Sugahara, M., Ago, H., Saino, H., Miyano, M.
Deposit date:2013-09-03
Release date:2014-09-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of anti-Prostaglandin E2 Fab fragment with Prostaglandin E2
To be Published
3WIF
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CRYSTAL STRUCTURE OF ANTI-PROSTAGLANDIN E2 FAB FRAGMENT 9CL-PGF2BETA COMPLEX
Descriptor:mAb Fab H fragment, mAb Fab L fragment, (Z)-7-[(1R,2R,3R,5R)-5-chloranyl-3-oxidanyl-2-[(E,3S)-3-oxidanyloct-1-enyl]cyclopentyl]hept-5-enoic acid
Authors:Sugahara, M., Ago, H., Saino, H., Miyano, M.
Deposit date:2013-09-12
Release date:2014-09-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of anti-Prostaglandin E2 Fab fragment with Prostaglandin E2
To be Published
3WUL
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CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Sugahara, M., Nango, E., Suzuki, M.
Deposit date:2014-04-28
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
3WUM
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CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Sugahara, M., Nango, E., Suzuki, M.
Deposit date:2014-04-28
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
3WXT
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CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Sugahara, M., Nango, E., Suzuki, M.
Deposit date:2014-08-08
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
3WXU
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CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Sugahara, M., Nango, E., Suzuki, M.
Deposit date:2014-08-08
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Grease matrix as a versatile carrier of proteins for serial crystallography
Nat.Methods, 12, 2015
5B6F
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CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF AN ANTI-LEUKOTRIENE C4 MONOCLONAL ANTIBODY COMPLEXED WITH LTC4
Descriptor:anti-leukotriene C4 monoclonal antibody immunoglobulin kappa light chain, anti-leukotriene C4 monoclonal antibody immunoglobulin gamma1 heavy chain, (5~{S},6~{R},7~{E},9~{E},11~{Z},14~{Z})-6-[(2~{R})-2-[[(4~{S})-4-azanyl-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]-3-(2-hydroxy-2-oxoethylamino)-3-oxidanylidene-propyl]sulfanyl-5-oxidanyl-icosa-7,9,11,14-tetraenoic acid, ...
Authors:Sugahara, M., Ago, H., Saino, H., Miyano, M.
Deposit date:2016-05-27
Release date:2017-05-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the Fab fragment of an anti-Leukotriene C4 monoclonal antibody complexed with LTC4
To Be Published
5WR9
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CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Sugahara, M., Suzuki, M., Masuda, T., Inoue, S., Nango, E.
Deposit date:2016-12-01
Release date:2017-12-06
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Hydroxyethyl cellulose matrix applied to serial crystallography
Sci Rep, 7, 2017
5WRA
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CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Sugahara, M., Suzuki, M., Masuda, T., Inoue, S., Nango, E.
Deposit date:2016-12-01
Release date:2017-12-06
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Hydroxyethyl cellulose matrix applied to serial crystallography
Sci Rep, 7, 2017
5WRB
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CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C, SODIUM ION, CHLORIDE ION
Authors:Sugahara, M., Suzuki, M., Masuda, T., Inoue, S., Nango, E.
Deposit date:2016-12-01
Release date:2017-12-20
Method:X-RAY DIFFRACTION (2.013 Å)
Cite:Hydroxyethyl cellulose matrix applied to serial crystallography
Sci Rep, 7, 2017
5WRC
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CRYSTAL STRUCTURE OF PROTEINASE K FROM ENGYODONTIUM ALBUM
Descriptor:Proteinase K, NITRATE ION, PRASEODYMIUM ION
Authors:Sugahara, M., Nakane, T., Suzuki, M., Masuda, T., Inoue, S., Numata, K.
Deposit date:2016-12-01
Release date:2017-11-29
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Hydroxyethyl cellulose matrix applied to serial crystallography
Sci Rep, 7, 2017
1V37
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CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE MUTASE FROM THERMUS THERMOPHILUS HB8
Descriptor:phosphoglycerate mutase, GLYCEROL
Authors:Sugahara, M., Yokoyama, S., Kuramitsu, S., Miyano, M., Iizuka, T., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-29
Release date:2004-12-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of phosphoglycerate mutase from Thermus thermophilus HB8
To be Published
2E8H
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CRYSTAL STRUCTURE OF PH0725 FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:Probable diphthine synthase, SODIUM ION, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Sugahara, M., Taketa, M., Tanaka, Y., Matsuura, Y., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-19
Release date:2007-07-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2OWD
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CRYSTAL STRUCTURE OF TTHB049 FROM THERMUS THERMOPHILUS HB8
Descriptor:Alpha-ribazole-5'-phosphate phosphatase, GLYCEROL, SODIUM ION
Authors:Sugahara, M., Taketa, M., Ono, N., Matsuura, Y., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-16
Release date:2007-08-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of TTHB049 from Thermus thermophilus HB8
To be Published
2OWE
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CRYSTAL STRUCTURE OF TTHB049 FROM THERMUS THERMOPHILUS HB8
Descriptor:Alpha-ribazole-5'-phosphate phosphatase
Authors:Sugahara, M., Taketa, M., Kageyama, Y., Matsuura, Y., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-16
Release date:2007-08-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of TTHB049 from Thermus thermophilus HB8
To be Published
2OWU
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CRYSTAL STRUCTURE OF PH0725 FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:diphthine synthase, SODIUM ION, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Sugahara, M., Taketa, M., Kageyama, Y., Matsuura, Y., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-17
Release date:2007-08-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2P2X
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CRYSTAL STRUCTURE OF PH0725 FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Sugahara, M., Ono, N., Taketa, M., Matsuura, Y., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-08
Release date:2007-09-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2P2Y
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CRYSTAL STRUCTURE OF TTHB049 FROM THERMUS THERMOPHILUS HB8
Descriptor:Alpha-ribazole-5'-phosphate phosphatase, CHLORIDE ION
Authors:Sugahara, M., Morikawa, Y., Taketa, M., Matsuura, Y., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-08
Release date:2007-09-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of TTHB049 from Thermus thermophilus HB8
To be Published