Author results

1FVO
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CRYSTAL STRUCTURE OF HUMAN ORNITHINE TRANSCARBAMYLASE COMPLEXED WITH CARBAMOYL PHOSPHATE
Descriptor:ORNITHINE TRANSCARBAMYLASE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
Authors:Shi, D., Morizono, H., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2000-09-20
Release date:2001-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Human ornithine transcarbamylase: crystallographic insights into substrate recognition and conformational changes.
Biochem.J., 354, 2001
1C9Y
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HUMAN ORNITHINE TRANSCARBAMYLASE: CRYSTALLOGRAPHIC INSIGHTS INTO SUBSTRATE RECOGNITION AND CATALYTIC MECHANISM
Descriptor:ORNITHINE CARBAMOYLTRANSFERASE, NORVALINE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
Authors:Shi, D., Yu, X., Morizono, H., Tuchman, M., Allewell, N.M.
Deposit date:1999-08-03
Release date:2000-06-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human ornithine transcarbamylase complexed with carbamoyl phosphate and L-norvaline at 1.9 A resolution.
Proteins, 39, 2000
1EP9
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HUMAN ORNITHINE TRANSCARBAMYLASE: CRYSTALLOGRAPHIC INSIGHTS INTO SUBSTRATE RECOGNITION AND CONFORMATIONAL CHANGE
Descriptor:ORNITHINE TRANSCARBAMYLASE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
Authors:Shi, D., Morizono, H., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2000-03-28
Release date:2001-04-04
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human ornithine transcarbamylase: crystallographic insights into substrate recognition and conformational changes.
Biochem.J., 354, 2001
1JS1
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CRYSTAL STRUCTURE OF A NEW TRANSCARBAMYLASE FROM THE ANAEROBIC BACTERIUM BACTEROIDES FRAGILIS AT 2.0 A RESOLUTION
Descriptor:Transcarbamylase, PHOSPHATE ION
Authors:Shi, D., Gallegos, R., DePonte III, J., Morizono, H., Yu, X., Allewell, N.M., Malamy, M., Tuchman, M.
Deposit date:2001-08-15
Release date:2002-07-17
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a transcarbamylase-like protein from the anaerobic bacterium Bacteroides fragilis at 2.0 A resolution.
J.Mol.Biol., 320, 2002
1OTH
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CRYSTAL STRUCTURE OF HUMAN ORNITHINE TRANSCARBAMOYLASE COMPLEXED WITH N-PHOSPHONACETYL-L-ORNITHINE
Descriptor:PROTEIN (ORNITHINE TRANSCARBAMOYLASE), N-(PHOSPHONOACETYL)-L-ORNITHINE
Authors:Shi, D., Morizono, H., Ha, Y., Aoyagi, M., Tuchman, N., Allewell, N.M.
Deposit date:1998-10-06
Release date:1999-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:1.85-A resolution crystal structure of human ornithine transcarbamoylase complexed with N-phosphonacetyl-L-ornithine. Catalytic mechanism and correlation with inherited deficiency.
J.Biol.Chem., 273, 1998
2F7V
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STRUCTURE OF ACETYLCITRULLINE DEACETYLASE COMPLEXED WITH ONE CO
Descriptor:aectylcitrulline deacetylase, COBALT (II) ION
Authors:Shi, D., Yu, X., Roth, L., Allewell, N.M., Tuchman, M.
Deposit date:2005-12-01
Release date:2006-09-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of a novel N-acetyl-L-citrulline deacetylase from Xanthomonas campestris
Biophys.Chem., 126, 2007
2F8H
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STRUCTURE OF ACETYLCITRULLINE DEACETYLASE FROM XANTHOMONAS CAMPESTRIS IN METAL-FREE FORM
Descriptor:aectylcitrulline deacetylase
Authors:Shi, D., Yu, X., Roth, L., Allewell, N.M., Tuchman, M.
Deposit date:2005-12-02
Release date:2006-09-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of a novel N-acetyl-L-citrulline deacetylase from Xanthomonas campestris
Biophys.Chem., 126, 2007
2FG6
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N-SUCCINYL-L-ORNITHINE TRANSCARBAMYLASE FROM B. FRAGILIS COMPLEXED WITH SULFATE AND N-SUCCINYL-L-NORVALINE
Descriptor:putative ornithine carbamoyltransferase, SULFATE ION, N-(3-CARBOXYPROPANOYL)-L-NORVALINE
Authors:Shi, D., Yu, X., Malamy, M.H., Allewell, N.M., Mendel, T.
Deposit date:2005-12-21
Release date:2006-05-23
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and catalytic mechanism of a novel N-succinyl-L-ornithine transcarbamylase in arginine biosynthesis of Bacteroides fragilis.
J.Biol.Chem., 281, 2006
2FG7
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N-SUCCINYL-L-ORNITHINE TRANSCARBAMYLASE FROM B. FRAGILIS COMPLEXED WITH CARBAMOYL PHOSPHATE AND N-SUCCINYL-L-NORVALINE
Descriptor:putative ornithine carbamoyltransferase, SULFATE ION, N-(3-CARBOXYPROPANOYL)-L-NORVALINE, ...
Authors:Shi, D., Yu, X., Malamy, M.H., Allewell, N.M., Tuchman, M.
Deposit date:2005-12-21
Release date:2006-05-23
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and catalytic mechanism of a novel N-succinyl-L-ornithine transcarbamylase in arginine biosynthesis of Bacteroides fragilis.
J.Biol.Chem., 281, 2006
2G7M
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CRYSTAL STRUCTURE OF B. FRAGILIS N-SUCCINYLORNITHINE TRANSCARBAMYLASE P90E MUTANT COMPLEXED WITH CARBAMOYL PHOSPHATE AND N-ACETYLNORVALINE
Descriptor:putative ornithine carbamoyltransferase, N-ACETYL-L-NORVALINE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
Authors:Shi, D., Yu, X., Roth, L., Morizono, H., Allewell, N.M., Tuchman, M.
Deposit date:2006-02-28
Release date:2007-03-06
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
2R8V
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NATIVE STRUCTURE OF N-ACETYLGLUTAMATE SYNTHASE FROM NEISSERIA GONORRHOEAE
Descriptor:Putative acetylglutamate synthase, ACETYL COENZYME *A
Authors:Shi, D., Sagar, V., Jin, Z., Yu, X., Caldovic, L., Morizono, H., Allewell, N.M., Tuchman, M.
Deposit date:2007-09-11
Release date:2008-01-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation.
J.Biol.Chem., 283, 2008
2R98
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CRYSTAL STRUCTURE OF N-ACETYLGLUTAMATE SYNTHASE (SELENOMET SUBSTITUTED) FROM NEISSERIA GONORRHOEAE
Descriptor:Putative acetylglutamate synthase, ACETYL COENZYME *A
Authors:Shi, D., Sagar, V., Jin, Z., Yu, X., Caldovic, L., Morizono, H., Allewell, N.M., Tuchman, M.
Deposit date:2007-09-12
Release date:2008-01-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation.
J.Biol.Chem., 283, 2008
3B8G
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CRYSTA STRUCTURE OF N-ACETYLGLUTAMATE SYNTHASE FROM NEISSERIA GONORRHOEAE COMPLEXED WITH COENZYME A AND N-ACETYL-GLUTAMATE
Descriptor:Putative acetylglutamate synthase, COENZYME A, N-ACETYL-L-GLUTAMATE
Authors:Shi, D., Sagar, V., Jin, Z., Yu, X., Caldovic, L., Morizono, H., Allewell, N.M., Tuchman, M.
Deposit date:2007-11-01
Release date:2008-01-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation.
J.Biol.Chem., 283, 2008
3J4G
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STRUCTURE OF LYSOZYME SOLVED BY MICROED TO 2.9 A
Descriptor:Lysozyme C
Authors:Shi, D., Nannenga, B.L., Iadanza, M.G., Gonen, T.
Deposit date:2013-08-12
Release date:2013-11-13
Last modified:2015-04-15
Method:ELECTRON CRYSTALLOGRAPHY (2.901 Å)
Cite:Three-dimensional electron crystallography of protein microcrystals.
Elife, 2, 2013
3KZC
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CRYSTAL STRUCTURE OF N-ACETYL-L-ORNITHINE TRANSCARBAMYLASE
Descriptor:N-acetylornithine carbamoyltransferase, SULFATE ION
Authors:Shi, D., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of N-acetylornithine transcarbamylase from Xanthomonas campestris: a novel enzyme in a new arginine biosynthetic pathway found in several eubacteria.
J.Biol.Chem., 280, 2005
3KZK
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CRYSTAL STRUCTURE OF ACETYLORNITHINE TRANSCARBAMYLASE COMPLEXED WITH ACETYLCITRULLINE
Descriptor:N-acetylornithine carbamoyltransferase, (S)-2-ACETAMIDO-5-UREIDOPENTANOIC ACID, SULFATE ION
Authors:Shi, D., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of N-acetylornithine transcarbamylase from Xanthomonas campestris: a novel enzyme in a new arginine biosynthetic pathway found in several eubacteria.
J.Biol.Chem., 280, 2005
3KZM
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CRYSTAL STRUCTURE OF N-ACETYL-L-ORNITHINE TRANSCARBAMYLASE COMPLEXED WITH CARBAMYL PHOSPHATE
Descriptor:N-acetylornithine carbamoyltransferase, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, GLYCEROL, ...
Authors:Shi, D., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of N-acetylornithine transcarbamoylase from Xanthomonas campestris complexed with substrates and substrate analogs imply mechanisms for substrate binding and catalysis.
Proteins, 64, 2006
3KZN
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CRYSTAL STRUCTURE OF N-ACETYL-L-ORNITHINE TRANSCARBAMYLASE COMPLEXED WITH N-ACETYL-L-ORNIRTHINE
Descriptor:N-acetylornithine carbamoyltransferase, N~2~-ACETYL-L-ORNITHINE, GLYCEROL, ...
Authors:Shi, D., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of N-acetylornithine transcarbamoylase from Xanthomonas campestris complexed with substrates and substrate analogs imply mechanisms for substrate binding and catalysis.
Proteins, 64, 2006
3KZO
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CRYSTAL STRUCTURE OF N-ACETYL-L-ORNITHINE TRANSCARBAMYLASE COMPLEXED WITH CARBAMYL PHOSPHATE AND N-ACETYL-L-NORVALINE
Descriptor:N-acetylornithine carbamoyltransferase, N-ACETYL-L-NORVALINE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
Authors:Shi, D., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2009-12-08
Release date:2010-03-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of N-acetylornithine transcarbamoylase from Xanthomonas campestris complexed with substrates and substrate analogs imply mechanisms for substrate binding and catalysis.
Proteins, 64, 2006
3L02
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CRYSTAL STRUCTURE OF N-ACETYL-L-ORNITHINE TRANSCARBAMYLASE E92A MUTANT COMPLEXED WITH CARBAMYL PHOSPHATE AND N-SUCCINYL-L-NORVALINE
Descriptor:N-acetylornithine carbamoyltransferase, N-(3-CARBOXYPROPANOYL)-L-NORVALINE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
Authors:Shi, D., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2009-12-09
Release date:2010-03-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
3L04
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CRYSTAL STRUCTURE OF N-ACETYL-L-ORNITHINE TRANSCARBAMYLASE E92P MUTANT COMPLEXED WITH CARBAMYL PHOSPHATE AND N-SUCCINYL-L-NORVALINE
Descriptor:N-acetylornithine carbamoyltransferase, N-(3-CARBOXYPROPANOYL)-L-NORVALINE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
Authors:Shi, D., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2009-12-09
Release date:2010-03-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
3L05
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CRYSTAL STRUCTURE OF N-ACETYL-L-ORNITHINE TRANSCARBAMYLASE E92S MUTANT COMPLEXED WITH CARBAMYL PHOSPHATE AND N-SUCCINYL-L-NORVALINE
Descriptor:N-acetylornithine carbamoyltransferase, N-(3-CARBOXYPROPANOYL)-L-NORVALINE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
Authors:Shi, D., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2009-12-09
Release date:2010-03-31
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
3L06
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CRYSTAL STRUCTURE OF N-ACETYL-L-ORNITHINE TRANSCARBAMYLASE E92V MUTANT COMPLEXED WITH CARBAMYL PHOSPHATE AND N-SUCCINYL-L-NORVALINE
Descriptor:N-acetylornithine carbamoyltransferase, N-(3-CARBOXYPROPANOYL)-L-NORVALINE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, ...
Authors:Shi, D., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2009-12-09
Release date:2010-03-31
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
3S6G
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CRYSTAL STRUCTURES OF SELENO-SUBSTITUTED MUTANT MMNAGS IN SPACE GROUP P212121
Descriptor:N-acetylglutamate kinase / N-acetylglutamate synthase, MALONATE ION, 1,2-ETHANEDIOL, ...
Authors:Shi, D., Li, Y., Cabrera-Luque, J., Jin, Z., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2011-05-25
Release date:2012-04-18
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.6681 Å)
Cite:A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011
3S6H
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CRYSTAL STRUCTURE OF NATIVE MMNAGS/K
Descriptor:N-acetylglutamate kinase / N-acetylglutamate synthase, GLUTAMIC ACID, COENZYME A
Authors:Shi, D., Li, Y., Cabrera-Luque, J., Jin, Z., Yu, X., Allewell, N.M., Tuchman, M.
Deposit date:2011-05-25
Release date:2012-04-25
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:A Novel N-acetylglutamate synthase architecture revealed by the crystal structure of the bifunctional enzyme from Maricaulis maris.
Plos One, 6, 2011