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Structural Analysis of Cofactor Binding of a Prolyl 4-Hydroxylase from the Pathogenic Bacterium Bacillus anthracis
Descriptor:	2-OXOGLUTARIC ACID, CADMIUM ION, GLYCEROL, ...
Authors:	Schnicker, N.J, Dey, M.
Deposit date:	2016-01-28
Release date:	2016-05-04
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.63 Å)
Cite:	Structural analysis of cofactor binding for a prolyl 4-hydroxylase from the pathogenic bacterium Bacillus anthracis. Acta Crystallogr D Struct Biol, 72, 2016

5HV4

Crystal Structure of a Prolyl 4-Hydroxylase Complexed with Alpha-ketoglutarate from the Pathogenic Bacterium Bacillus anthracis in C2221
Descriptor:	2-OXOGLUTARIC ACID, 2OG-Fe(II) oxygenase, CADMIUM ION, ...
Authors:	Schnicker, N.J, Dey, M.
Deposit date:	2016-01-28
Release date:	2016-05-04
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (2.35 Å)
Cite:	Structural analysis of cofactor binding for a prolyl 4-hydroxylase from the pathogenic bacterium Bacillus anthracis. Acta Crystallogr D Struct Biol, 72, 2016

5IAX

Mechanistic and Structural Analysis of Substrate Recognition and Cofactor Binding by an Unusual Bacterial Prolyl Hydroxylase - Co-BaP4H-PPG
Descriptor:	2-OXOGLUTARIC ACID, BETA-MERCAPTOETHANOL, COBALT (II) ION, ...
Authors:	Schnicker, N.J, Dey, M.
Deposit date:	2016-02-22
Release date:	2016-04-27
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Bacillus anthracis Prolyl 4-Hydroxylase Modifies Collagen-like Substrates in Asymmetric Patterns. J.Biol.Chem., 291, 2016

5IAT

Mechanistic and Structural Analysis of Substrate Recognition and Cofactor Binding by an Unusual Bacterial Prolyl Hydroxylase - apo-BaP4H
Descriptor:	DI(HYDROXYETHYL)ETHER, GLYCEROL, Procollagen-Proline Dioxygenase
Authors:	Schnicker, N.J, Dey, M.
Deposit date:	2016-02-21
Release date:	2016-04-27
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.67 Å)
Cite:	Bacillus anthracis Prolyl 4-Hydroxylase Modifies Collagen-like Substrates in Asymmetric Patterns. J.Biol.Chem., 291, 2016

5IAV

Mechanistic and Structural Analysis of Substrate Recognition and Cofactor Binding by an Unusual Bacterial Prolyl Hydroxylase - Co-BaP4H-MLI
Descriptor:	COBALT (II) ION, MALONATE ION, Procollagen-Proline Dioxygenase
Authors:	Schnicker, N.J, Dey, M.
Deposit date:	2016-02-21
Release date:	2016-04-27
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Bacillus anthracis Prolyl 4-Hydroxylase Modifies Collagen-like Substrates in Asymmetric Patterns. J.Biol.Chem., 291, 2016

5TFZ

Crystal structure of the dimethylsulfoniopropionate (DMSP) lyase DddK complexed with nickel and diacrylate
Descriptor:	3-(acryloyloxy)propanoic acid, DI(HYDROXYETHYL)ETHER, NICKEL (II) ION, ...
Authors:	Schnicker, N.J, Dey, M.
Deposit date:	2016-09-27
Release date:	2017-06-14
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Structural and Biochemical Insights into Dimethylsulfoniopropionate Cleavage by Cofactor-Bound DddK from the Prolific Marine Bacterium Pelagibacter. Biochemistry, 56, 2017

5TG0

Crystal structure of the dimethylsulfoniopropionate (DMSP) lyase DddK complexed with iron and zinc
Descriptor:	FE (III) ION, ZINC ION, dimethylsulfoniopropionate lyase DddK
Authors:	Schnicker, N.J, Dey, M.
Deposit date:	2016-09-27
Release date:	2017-06-14
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (1.44 Å)
Cite:	Structural and Biochemical Insights into Dimethylsulfoniopropionate Cleavage by Cofactor-Bound DddK from the Prolific Marine Bacterium Pelagibacter. Biochemistry, 56, 2017

5V7Y

Prolyl 4-Hydroxylase Interacts with and Modifies Elongation Factor Tu
Descriptor:	(4S)-2-METHYL-2,4-PENTANEDIOL, 2-OXOGLUTARIC ACID, 2OG-Fe(II) oxygenase, ...
Authors:	Schnicker, N.J, Dey, M.
Deposit date:	2017-03-21
Release date:	2017-10-18
Last modified:	2023-10-04
Method:	X-RAY DIFFRACTION (2.05 Å)
Cite:	Bacillus anthracis Prolyl 4-Hydroxylase Interacts with and Modifies Elongation Factor Tu. Biochemistry, 56, 2017

7JXV

ANTH domain of CALM (clathrin-assembly lymphoid myeloid leukemia protein) bound to ubiquitin
Descriptor:	Phosphatidylinositol-binding clathrin assembly protein, Ubiquitin
Authors:	Pashkova, N, Gakhar, L, Schnicker, N.J, Piper, R.C.
Deposit date:	2020-08-28
Release date:	2021-08-04
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (2.35 Å)
Cite:	ANTH domains within CALM, HIP1R, and Sla2 recognize ubiquitin internalization signals. Elife, 10, 2021

7UI7

CryoEM structure of LARGE1 from C2 reconstruction
Descriptor:	MANGANESE (II) ION, Xylosyl- and glucuronyltransferase LARGE1
Authors:	Schnicker, N.J, Joseph, S, Campbell, K.P.
Deposit date:	2022-03-28
Release date:	2023-03-08
Method:	ELECTRON MICROSCOPY (3.4 Å)
Cite:	CryoEM structure of LARGE1 from C2 reconstruction To Be Published

8SZX

Crystal structure of b'-WD40 Lys17Ala mutant
Descriptor:	Coatomer subunit beta'
Authors:	Dey, D, Hasan, S.S.
Deposit date:	2023-05-30
Release date:	2024-02-14
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs. Nat Commun, 14, 2023

7S16

Crystal structure of alpha-COP-WD40 domain R57A mutant
Descriptor:	Coatomer subunit alpha, SODIUM ION
Authors:	Dey, D, Singh, S, Khan, S, Martin, M, Schnicker, N, Gakhar, L, Pierce, B, Hasan, S.S.
Deposit date:	2021-09-01
Release date:	2022-02-16
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.24 Å)
Cite:	An extended motif in the SARS-CoV-2 spike modulates binding and release of host coatomer in retrograde trafficking Commun Biol, 5, 2022

7S22

Crystal structure of alpha-COP-WD40 domain
Descriptor:	Coatomer subunit alpha
Authors:	Dey, D, Singh, S, Khan, S, Martin, M, Schnicker, N, Gakhar, L, Pierce, B, Hasan, S.S.
Deposit date:	2021-09-02
Release date:	2022-02-16
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.75 Å)
Cite:	An extended motif in the SARS-CoV-2 spike modulates binding and release of host coatomer in retrograde trafficking Commun Biol, 5, 2022

7S23

Crystal structure of alpha-COP-WD40 domain, Y139A mutant
Descriptor:	Coatomer subunit alpha
Authors:	Dey, D, Singh, S, Khan, S, Martin, M, Schnicker, N, Gakhar, L, Pierce, B, Hasan, S.S.
Deposit date:	2021-09-03
Release date:	2022-02-16
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.49 Å)
Cite:	An extended motif in the SARS-CoV-2 spike modulates binding and release of host coatomer in retrograde trafficking Commun Biol, 5, 2022

7RE5

Crystal Structure of The Tetramerization Domain (29-147) From Human Voltage-gated Potassium Channel Kv2.1 in P 41 21 2 Space Group
Descriptor:	Potassium voltage-gated channel subfamily B member 1, ZINC ION
Authors:	Xu, Z, Schnicker, N, Baker, S.
Deposit date:	2021-07-12
Release date:	2022-06-08
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Pentameric assembly of the Kv2.1 tetramerization domain. Acta Crystallogr D Struct Biol, 78, 2022

6WLG

Ints3 C-terminal Domain
Descriptor:	Integrator complex subunit 3
Authors:	Li, J, Ma, X.L, Banerjee, S, Dong, Z.G.
Deposit date:	2020-04-20
Release date:	2020-12-02
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (3.111 Å)
Cite:	Structural basis for multifunctional roles of human Ints3 C-terminal domain. J.Biol.Chem., 296, 2020

7SPD

Crystal Structure of The Tetramerization Domain (29-147) From Human Voltage-gated Potassium Channel Kv2.1 in C 2 2 21 Space Group
Descriptor:	DI(HYDROXYETHYL)ETHER, Potassium voltage-gated channel subfamily B member 1, ZINC ION
Authors:	Xu, Z, Schnicker, N, Baker, S.
Deposit date:	2021-11-02
Release date:	2022-06-08
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Pentameric assembly of the Kv2.1 tetramerization domain. Acta Crystallogr D Struct Biol, 78, 2022

8ENY

Crystal structure of alpha-COPI-WD40 domain R13A mutant.
Descriptor:	ACETYL GROUP, Putative coatomer subunit alpha
Authors:	Dey, D, Hasan, S.S.
Deposit date:	2022-09-30
Release date:	2024-01-31
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs. Nat Commun, 14, 2023

8ENS

Crystal structure of beta'-COPI-WD40 domain in complex with SARS-CoV-2 spike tail hepta-peptide
Descriptor:	Coatomer subunit beta', spike tail hepta-peptide
Authors:	Dey, D, Hasan, S.S.
Deposit date:	2022-09-30
Release date:	2024-01-31
Method:	X-RAY DIFFRACTION (1.45 Å)
Cite:	A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs. Nat Commun, 14, 2023

8ENX

Crystal structure of beta'-COPI-WD40 domain Y33A mutant in complex with SARS-CoV-2 clientized spike tail heptapeptide.
Descriptor:	Clientized spike tail heptapeptide, Coatomer subunit beta'
Authors:	Dey, D, Hasan, S.S.
Deposit date:	2022-09-30
Release date:	2024-01-31
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs. Nat Commun, 14, 2023

8ENZ

Crystal structure of alpha-COPI-WD40 domain K15A mutant.
Descriptor:	ACETYL GROUP, Putative coatomer subunit alpha
Authors:	Dey, D, Hasan, S.S.
Deposit date:	2022-09-30
Release date:	2024-01-31
Method:	X-RAY DIFFRACTION (1.65 Å)
Cite:	A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs. Nat Commun, 14, 2023

8ENW

Crystal structure of beta'-COPI-WD40 domain in complex with SARS-CoV-2 clientized spike tail heptapeptide.
Descriptor:	1,2-ETHANEDIOL, Clientized spike tail peptide, Coatomer subunit beta'
Authors:	Dey, D, Hasan, S.S.
Deposit date:	2022-09-30
Release date:	2024-01-31
Method:	X-RAY DIFFRACTION (1.45 Å)
Cite:	A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs. Nat Commun, 14, 2023

8EO0

Crystal structure of alpha-COPI WD40 domain R300A mutant.
Descriptor:	ACETYL GROUP, Putative coatomer subunit alpha
Authors:	Dey, D, Hasan, S.S.
Deposit date:	2022-10-01
Release date:	2024-01-31
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs. Nat Commun, 14, 2023

7U53

Nucleosome core particle with AP-site at SHL0
Descriptor:	DNA (144-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ...
Authors:	Freudenthal, B.D, Weaver, T.M.
Deposit date:	2022-03-01
Release date:	2022-09-07
Last modified:	2022-10-05
Method:	ELECTRON MICROSCOPY (4 Å)
Cite:	Structural basis for APE1 processing DNA damage in the nucleosome. Nat Commun, 13, 2022

7U51

Nucleosome core particle with AP-site at SHL-6
Descriptor:	DNA (145-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ...
Authors:	Freudenthal, B.D, Weaver, T.M.
Deposit date:	2022-03-01
Release date:	2022-09-07
Last modified:	2022-10-05
Method:	ELECTRON MICROSCOPY (3.1 Å)
Cite:	Structural basis for APE1 processing DNA damage in the nucleosome. Nat Commun, 13, 2022

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Displayed results:	25
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