Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5J7A
DownloadVisualize
BU of 5j7a by Molmil
Bacteriorhodopsin ground state structure obtained with Serial Femtosecond Crystallography
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL
Authors:Nogly, P, Panneels, V, Nelson, G, Gati, C, Kimura, T, Milne, C, Milathianaki, D, Kubo, M, Wu, W, Conrad, C, Coe, J, Bean, R, Zhao, Y, Bath, P, Dods, R, Harimoorthy, R, Beyerlein, K.R, Rheinberger, J, James, D, DePonte, D, Li, C, Sala, L, Williams, G, Hunter, M, Koglin, J.E, Berntsen, P, Nango, E, Iwata, S, Chapman, H.N, Fromme, P, Frank, M, Abela, R, Boutet, S, Barty, A, White, T.A, Weierstall, U, Spence, J, Neutze, R, Schertler, G, Standfuss, J.
Deposit date:2016-04-06
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Lipidic cubic phase injector is a viable crystal delivery system for time-resolved serial crystallography.
Nat Commun, 7, 2016
3DTP
DownloadVisualize
BU of 3dtp by Molmil
Tarantula heavy meromyosin obtained by flexible docking to Tarantula muscle thick filament Cryo-EM 3D-MAP
Descriptor: Myosin II regulatory light chain, Myosin light polypeptide 6, Myosin-11,Myosin-7
Authors:Alamo, L, Wriggers, W, Pinto, A, Bartoli, F, Salazar, L, Zhao, F.Q, Craig, R, Padron, R.
Deposit date:2008-07-15
Release date:2008-10-07
Last modified:2020-01-29
Method:ELECTRON MICROSCOPY (20 Å)
Cite:Three-Dimensional Reconstruction of Tarantula Myosin Filaments Suggests How Phosphorylation May Regulate Myosin Activity
J.Mol.Biol., 384, 2008
2MTX
DownloadVisualize
BU of 2mtx by Molmil
Protection against experimental P. falciparum malaria is associated with short AMA-1 peptide analogue alpha-helical structures
Descriptor: Apical membrane antigen-1
Authors:Cubillos, M, Salazar, L, Torres, L, Sandoval, M, Patarroyo, M.E.
Deposit date:2014-09-01
Release date:2015-02-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Protection against experimental P. falciparum malaria is associated with short AMA-1 peptide analogue alpha-helical structures
To be Published
2MTW
DownloadVisualize
BU of 2mtw by Molmil
Evidence supporting the hypothesis that specifically modifying a malaria peptide to fit into HLA-DR 1*03 molecules induces antibody production and protection
Descriptor: Erythrocyte-binding antigen 175
Authors:Cifuentes, G, Salazar, L, Vargas, L, Parra, C, Vanegas, M, Cortes, J, Sandoval, M, Patarroyo, M.E.
Deposit date:2014-09-01
Release date:2015-02-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Evidence supporting the hypothesis that specifically modifying a malaria peptide to fit HLA-DR 1*03 molecules induces antibody production and protection
To be Published
2MU9
DownloadVisualize
BU of 2mu9 by Molmil
Changing ABRA protein peptide to fit the HLA-DR B1*0301 molecule renders it protection-inducing
Descriptor: P101/acidic basic repeat antigen
Authors:Salazar, L, Alba, M, Curtidor, H, Bermudez, A, Vargas, L, Rivera, Z, Patarroyo, M.
Deposit date:2014-09-04
Release date:2015-09-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Changing ABRA protein peptide to fit into the HLA-DRbeta1*0301 molecule renders it protection-inducing.
Biochem.Biophys.Res.Commun., 322, 2004
6MD6
DownloadVisualize
BU of 6md6 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF PLANT EXOHYDROLASE IN COMPLEX WITH METHYL 2-THIO-BETA-SOPHOROSIDE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, GLYCEROL, ...
Authors:Streltsov, V.A, Luang, S, Hrmova, M.
Deposit date:2018-09-04
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
6MI1
DownloadVisualize
BU of 6mi1 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE VARIANT PLANT EXOHYDROLASE ARG158ALA-GLU161ALA IN COMPLEX WITH METHYL 6-THIO-BETA-GENTIOBIOSIDE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, GLYCEROL, ...
Authors:Streltsov, V.A, Luang, S, Hrmova, M.
Deposit date:2018-09-18
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
3WLH
DownloadVisualize
BU of 3wlh by Molmil
Crystal Structure Analysis of Plant Exohydrolase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, GLYCEROL, ...
Authors:Streltsov, V.A, Hrmova, M.
Deposit date:2013-11-12
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
3WLR
DownloadVisualize
BU of 3wlr by Molmil
Crystal Structure Analysis of Plant Exohydrolase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, GLYCEROL
Authors:Streltsov, V.A, Hrmova, M, Luang, S.
Deposit date:2013-11-12
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
7ALX
DownloadVisualize
BU of 7alx by Molmil
Sav-SOD: Chimeric Streptavidin-cSOD as Host for Artificial Metalloenzymes
Descriptor: ((4S)-1,3-dimesityl-4-((5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamido)methyl)imidazolidin-2-yl)gold, Streptavidin,Superoxide dismutase [Cu-Zn],Streptavidin
Authors:Igareta, N.V, Christoffel, F, Peterson, R.L, Ward, T.R.
Deposit date:2020-10-07
Release date:2021-07-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design and evolution of chimeric streptavidin for protein-enabled dual gold catalysis
Nat Catal, 4, 2021
3WLJ
DownloadVisualize
BU of 3wlj by Molmil
Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme EXO1 in complex with 3-deoxy-glucose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, 3-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, ...
Authors:Streltsov, V.A, Hrmova, M.
Deposit date:2013-11-12
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
3WLQ
DownloadVisualize
BU of 3wlq by Molmil
Crystal Structure Analysis of Plant Exohydrolase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, GLYCEROL
Authors:Streltsov, V.A, Luang, S, Hrmova, M.
Deposit date:2013-11-12
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
3WLL
DownloadVisualize
BU of 3wll by Molmil
Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme EXO1 in complex with PEG400
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[beta-D-xylopyranose-(1-2)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, ...
Authors:Streltsov, V.A, Hrmova, M.
Deposit date:2013-11-12
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
3WLN
DownloadVisualize
BU of 3wln by Molmil
Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme EXO1 in complex with octyl-S-glucoside
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Streltsov, V.A, Hrmova, M.
Deposit date:2013-11-12
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
3WLM
DownloadVisualize
BU of 3wlm by Molmil
Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme exo1 in complex with octyl-O-glucoside
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Streltsov, V.A, Hrmova, M.
Deposit date:2013-11-12
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
3WLK
DownloadVisualize
BU of 3wlk by Molmil
Crystal structure of barley beta-D-glucan glucohydrolase isoenzyme EXO1 in complex with 4-deoxy-glucose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, GLYCEROL, ...
Authors:Streltsov, V.A, Hrmova, M.
Deposit date:2013-11-12
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
3WLP
DownloadVisualize
BU of 3wlp by Molmil
Crystal Structure Analysis of Plant Exohydrolase
Descriptor: 1-thio-beta-D-glucopyranose-(1-6)-methyl beta-D-glucopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, ...
Authors:Streltsov, V.A, Luang, S, Hrmova, M.
Deposit date:2013-11-12
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
3WLI
DownloadVisualize
BU of 3wli by Molmil
Crystal Structure Analysis of Plant Exohydrolase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, GLYCEROL, ...
Authors:Streltsov, V.A, Hrmova, M.
Deposit date:2013-11-12
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
3WLO
DownloadVisualize
BU of 3wlo by Molmil
Crystal Structure Analysis of Plant Exohydrolase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucan exohydrolase isoenzyme ExoI, SULFATE ION, ...
Authors:Streltsov, V.A, Luang, S, Hrmova, M.
Deposit date:2013-11-12
Release date:2015-03-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of processive catalysis by an exo-hydrolase with a pocket-shaped active site.
Nat Commun, 10, 2019
5TBY
DownloadVisualize
BU of 5tby by Molmil
HUMAN BETA CARDIAC HEAVY MEROMYOSIN INTERACTING-HEADS MOTIF OBTAINED BY HOMOLOGY MODELING (USING SWISS-MODEL) OF HUMAN SEQUENCE FROM APHONOPELMA HOMOLOGY MODEL (PDB-3JBH), RIGIDLY FITTED TO HUMAN BETA-CARDIAC NEGATIVELY STAINED THICK FILAMENT 3D-RECONSTRUCTION (EMD-2240)
Descriptor: Myosin light chain 3, Myosin regulatory light chain 2, ventricular/cardiac muscle isoform, ...
Authors:ALAMO, L, WARE, J.S, PINTO, A, GILLILAN, R.E, SEIDMAN, J.G, SEIDMAN, C.E, PADRON, R.
Deposit date:2016-09-13
Release date:2017-06-07
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (20 Å)
Cite:Effects of myosin variants on interacting-heads motif explain distinct hypertrophic and dilated cardiomyopathy phenotypes.
Elife, 6, 2017
3JAX
DownloadVisualize
BU of 3jax by Molmil
Heavy meromyosin from Schistosoma mansoni muscle thick filament by negative stain EM
Descriptor: myosin 2 heavy chain, myosin regulatory light chain, smooth muscle myosin essential light chain
Authors:Sulbaran, G, Alamo, L, Pinto, A, Marquez, G, Mendez, F, Padron, R, Craig, R.
Deposit date:2015-07-03
Release date:2015-10-07
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (23 Å)
Cite:An invertebrate smooth muscle with striated muscle myosin filaments.
Proc.Natl.Acad.Sci.USA, 112, 2015
3JBH
DownloadVisualize
BU of 3jbh by Molmil
TWO HEAVY MEROMYOSIN INTERACTING-HEADS MOTIFS FLEXIBLE DOCKED INTO TARANTULA THICK FILAMENT 3D-MAP ALLOWS IN DEPTH STUDY OF INTRA- AND INTERMOLECULAR INTERACTIONS
Descriptor: MYOSIN 2 ESSENTIAL LIGHT CHAIN STRIATED MUSCLE, MYOSIN 2 HEAVY CHAIN STRIATED MUSCLE, MYOSIN 2 REGULATORY LIGHT CHAIN STRIATED MUSCLE
Authors:Alamo, L, Qi, D, Wriggers, W, Pinto, A, Zhu, J, Bilbao, A, Gillilan, R.E, Hu, S, Padron, R.
Deposit date:2015-09-01
Release date:2016-03-09
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (20 Å)
Cite:Conserved Intramolecular Interactions Maintain Myosin Interacting-Heads Motifs Explaining Tarantula Muscle Super-Relaxed State Structural Basis.
J. Mol. Biol., 428, 2016
2MUG
DownloadVisualize
BU of 2mug by Molmil
Protective cellular immunity against P. falciparum malaria merozoite is associated with a different P7 and P8 residue orientation in the MHC-peptide-TCR complex
Descriptor: Serine-repeat antigen protein
Authors:Patarroyo, M, Salazar, L, Cifuentes, G, Lozano, J, Delgado, G, Rivera, Z, Rosas, J, Vargas, L.
Deposit date:2014-09-09
Release date:2014-10-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Protective cellular immunity against P. falciparum malaria merozoites is associated with a different P7 and P8 residue orientation in the MHC-peptide-TCR complex.
Biochimie, 88, 2006
8F13
DownloadVisualize
BU of 8f13 by Molmil
Structure of the MDM2 P53 binding domain in complex with H103, an all-D Helicon Polypeptide, alternative C-terminus
Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, E3 ubiquitin-protein ligase Mdm2, ...
Authors:Li, K, Callahan, A.J, Travaline, T.L, Tokareva, O.S, Swiecicki, J.-M, Verdine, G.L, Pentelute, B.L, McGee, J.H.
Deposit date:2022-11-04
Release date:2023-02-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Single-Shot Flow Synthesis of D-Proteins for Mirror-Image Phage Display
Chemrxiv, 2023
8F12
DownloadVisualize
BU of 8f12 by Molmil
Structure of the MDM2 P53 binding domain in complex with H103, an all-D Helicon Polypeptide
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, H103, ...
Authors:Li, K, Callahan, A.J, Travaline, T.L, Tokareva, O.S, Swiecicki, J.-M, Verdine, G.L, Pentelute, B.L, McGee, J.H.
Deposit date:2022-11-04
Release date:2023-02-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Single-Shot Flow Synthesis of D-Proteins for Mirror-Image Phage Display
Chemrxiv, 2023

 

12>

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon