Author results

1IRM
  • Download 1irm
  • View 1irm
Molmil generated image of 1irm
CRYSTAL STRUCTURE OF APO HEME OXYGENASE-1
Descriptor:apo heme oxygenase-1
Authors:Sugishima, M., Sakamoto, H., Kakuta, Y., Omata, Y., Hayashi, S., Noguchi, M., Fukuyama, K.
Deposit date:2001-10-09
Release date:2002-07-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of rat apo-heme oxygenase-1 (HO-1): mechanism of heme binding in HO-1 inferred from structural comparison of the apo and heme complex forms
Biochemistry, 41, 2002
1DVE
  • Download 1dve
  • View 1dve
Molmil generated image of 1dve
CRYSTAL STRUCTURE OF RAT HEME OXYGENASE-1 IN COMPLEX WITH HEME
Descriptor:HEME OXYGENASE-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugishima, M., Omata, Y., Kakuta, Y., Sakamoto, H., Noguchi, M., Fukuyama, K.
Deposit date:2000-01-20
Release date:2000-04-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of rat heme oxygenase-1 in complex with heme.
FEBS Lett., 471, 2000
1IX3
  • Download 1ix3
  • View 1ix3
Molmil generated image of 1ix3
CRYSTAL STRUCTURE OF RAT HEME OXYGENASE-1 IN COMPLEX WITH HEME BOUND TO CYANIDE
Descriptor:HEME OXYGENASE-1, CYANIDE ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugishima, M., Sakamoto, H., Omata, Y., Hayashi, S., Noguchi, M., Fukuyama, K.
Deposit date:2002-06-10
Release date:2003-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Ferrous and CO-, CN(-)-, and NO-Bound Forms of Rat Heme Oxygenase-1 (HO-1) in Complex with Heme: Structural Implications for Discrimination between CO and O(2) in HO-1.
Biochemistry, 42, 2003
1IX4
  • Download 1ix4
  • View 1ix4
Molmil generated image of 1ix4
CRYSTAL STRUCTURE OF RAT HEME OXYGENASE-1 IN COMPLEX WITH HEME BOUND TO CARBON MONOXIDE
Descriptor:HEME OXYGENASE-1, PROTOPORPHYRIN IX CONTAINING FE, CARBON MONOXIDE
Authors:Sugishima, M., Sakamoto, H., Omata, Y., Hayashi, S., Noguchi, M., Fukuyama, K.
Deposit date:2002-06-10
Release date:2003-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of Ferrous and CO-, CN(-)-, and NO-Bound Forms of Rat Heme Oxygenase-1 (HO-1) in Complex with Heme: Structural Implications for Discrimination between CO and O(2) in HO-1.
Biochemistry, 42, 2003
1B7F
  • Download 1b7f
  • View 1b7f
Molmil generated image of 1b7f
SXL-LETHAL PROTEIN/RNA COMPLEX
Descriptor:RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3'), PROTEIN (SXL-LETHAL PROTEIN)
Authors:Handa, N., Nureki, O., Kurimoto, K., Kim, I., Sakamoto, H., Shimura, Y., Muto, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1999-01-23
Release date:1999-05-03
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for recognition of the tra mRNA precursor by the Sex-lethal protein.
Nature, 398, 1999
1C7V
  • Download 1c7v
  • View 1c7v
Molmil generated image of 1c7v
NMR SOLUTION STRUCTURE OF THE CALCIUM-BOUND C-TERMINAL DOMAIN (W81-S161) OF CALCIUM VECTOR PROTEIN FROM AMPHIOXUS
Descriptor:CALCIUM VECTOR PROTEIN
Authors:Theret, I., Baladi, S., Cox, J.A., Sakamoto, H., Craescu, C.T.
Deposit date:2000-03-27
Release date:2000-04-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Sequential calcium binding to the regulatory domain of calcium vector protein reveals functional asymmetry and a novel mode of structural rearrangement.
Biochemistry, 39, 2000
1C7W
  • Download 1c7w
  • View 1c7w
Molmil generated image of 1c7w
NMR SOLUTION STRUCTURE OF THE CALCIUM-BOUND C-TERMINAL DOMAIN (W81-S161) OF CALCIUM VECTOR PROTEIN FROM AMPHIOXUS
Descriptor:CALCIUM VECTOR PROTEIN
Authors:Theret, I., Baladi, S., Cox, J.A., Sakamoto, H., Craescu, C.T.
Deposit date:2000-03-27
Release date:2000-04-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Sequential calcium binding to the regulatory domain of calcium vector protein reveals functional asymmetry and a novel mode of structural rearrangement.
Biochemistry, 39, 2000
1D8Z
  • Download 1d8z
  • View 1d8z
Molmil generated image of 1d8z
SOLUTION STRUCTURE OF THE FIRST RNA-BINDING DOMAIN (RBD1) OF HU ANTIGEN C (HUC)
Descriptor:HU ANTIGEN C
Authors:Inoue, M., Muto, Y., Sakamoto, H., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1999-10-26
Release date:2000-04-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C.
Nucleic Acids Res., 28, 2000
1D9A
  • Download 1d9a
  • View 1d9a
Molmil generated image of 1d9a
SOLUTION STRUCTURE OF THE SECOND RNA-BINDING DOMAIN (RBD2) OF HU ANTIGEN C (HUC)
Descriptor:HU ANTIGEN C
Authors:Inoue, M., Muto, Y., Sakamoto, H., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1999-10-26
Release date:2000-04-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C.
Nucleic Acids Res., 28, 2000
1DVG
  • Download 1dvg
  • View 1dvg
Molmil generated image of 1dvg
CRYSTAL STRUCTURE OF RAT HEME OXYGENASE-1 IN COMPLEX WITH HEME; SELELENO-METHIONINE DERIVATIVE, MUTATED AT M51T,M93L,M155L,M191L.
Descriptor:HEME OXYGENASE-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugishima, M., Omata, Y., Kakuta, Y., Sakamoto, H., Noguchi, M., Fukuyama, K.
Deposit date:2000-01-20
Release date:2000-04-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of rat heme oxygenase-1 in complex with heme.
FEBS Lett., 471, 2000
1FNX
  • Download 1fnx
  • View 1fnx
Molmil generated image of 1fnx
SOLUTION STRUCTURE OF THE HUC RBD1-RBD2 COMPLEXED WITH THE AU-RICH ELEMENT
Descriptor:AU-RICH RNA ELEMENT, HU ANTIGEN C
Authors:Inoue, M., Hirao, M., Kasashima, K., Kim, I.-S., Kawai, G., Kigawa, T., Sakamoto, H., Muto, Y., Yokoyama, S.
Deposit date:2000-08-24
Release date:2003-06-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of mouse HuC RNA-binding domains complexed with an AU-Rich element reveals determinants of neuronal differentiation
To be Published, 2000
1IVJ
  • Download 1ivj
  • View 1ivj
Molmil generated image of 1ivj
CRYSTAL STRUCTURE OF RAT HEMEOXYGENASE-1 IN COMPLEX WITH HEME AND AZIDE.
Descriptor:Hemeoxygenase-1, AZIDE ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugishima, M., Sakamoto, H., Omata, Y., Hayashi, S., Noguchi, M., Fukuyama, K.
Deposit date:2002-03-18
Release date:2002-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Rat Heme Oxygenase-1 in Complex with Heme Bound to Azide. IMPLICATION FOR REGIOSPECIFIC HYDROXYLATION OF HEME AT THE alpha -MESO CARBON
J.Biol.Chem., 277, 2002
1J2C
  • Download 1j2c
  • View 1j2c
Molmil generated image of 1j2c
CRYSTAL STRUCTURE OF RAT HEME OXYGENASE-1 IN COMPLEX WITH BILIVERDIN IXALPHA-IRON CLUSTER
Descriptor:Heme Oxygenase-1, FE (III) ION, BILIVERDINE IX ALPHA
Authors:Sugishima, M., Sakamoto, H., Noguchi, M., Fukuyama, K.
Deposit date:2002-12-29
Release date:2003-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Rat Heme Oxygenase-1 in Complex with Biliverdin-Iron Chelate: CONFORMATIONAL CHANGE OF THE DISTAL HELIX DURING THE HEME CLEAVAGE REACTION.
J.Biol.Chem., 278, 2003
1J7Q
  • Download 1j7q
  • View 1j7q
Molmil generated image of 1j7q
SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF THE DEFUNCT EF-HAND DOMAIN OF CALCIUM VECTOR PROTEIN
Descriptor:Calcium Vector Protein
Authors:Theret, I., Baladi, S., Cox, J.A., Gallay, J., Sakamoto, H., Craescu, C.T.
Deposit date:2001-05-18
Release date:2001-06-06
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of the defunct domain of calcium vector protein.
Biochemistry, 40, 2001
1J7R
  • Download 1j7r
  • View 1j7r
Molmil generated image of 1j7r
SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF THE DEFUNCT EF-HAND DOMAIN OF CALCIUM VECTOR PROTEIN
Descriptor:Calcium Vector Protein
Authors:Theret, I., Baladi, S., Cox, J.A., Gallay, J., Sakamoto, H., Craescu, C.T.
Deposit date:2001-05-18
Release date:2001-06-06
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of the defunct domain of calcium vector protein.
Biochemistry, 40, 2001
1UBB
  • Download 1ubb
  • View 1ubb
Molmil generated image of 1ubb
CRYSTAL STRUCTURE OF RAT HO-1 IN COMPLEX WITH FERROUS HEME
Descriptor:Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugishima, M., Sakamoto, H., Higashimoto, Y., Noguchi, M., Fukuyama, K.
Deposit date:2003-04-03
Release date:2003-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Ferrous and CO-, CN(-)-, and NO-Bound Forms of Rat Heme Oxygenase-1 (HO-1) in Complex with Heme: Structural Implications for Discrimination between CO and O(2) in HO-1.
Biochemistry, 42, 2003
1ULX
  • Download 1ulx
  • View 1ulx
Molmil generated image of 1ulx
PARTIALLY PHOTOLYZED STRUCTURE OF CO-BOUND HEME-HEME OXYGENASE COMPLEX
Descriptor:Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE, CARBON MONOXIDE
Authors:Sugishima, M., Sakamoto, H., Noguchi, M., Fukuyama, K.
Deposit date:2003-09-16
Release date:2004-08-31
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:CO-trapping site in heme oxygenase revealed by photolysis of its co-bound heme complex: mechanism of escaping from product inhibition
J.Mol.Biol., 341, 2004
1VGI
  • Download 1vgi
  • View 1vgi
Molmil generated image of 1vgi
CRYSTAL STRUCTURE OF XENON BOUND RAT HEME-HEME OXYGENASE-1 COMPLEX
Descriptor:Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE, XENON, ...
Authors:Sugishima, M., Sakamoto, H., Noguchi, M., Fukuyama, K.
Deposit date:2004-04-26
Release date:2004-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:CO-trapping site in heme oxygenase revealed by photolysis of its co-bound heme complex: mechanism of escaping from product inhibition
J.Mol.Biol., 341, 2004
2SXL
  • Download 2sxl
  • View 2sxl
Molmil generated image of 2sxl
SEX-LETHAL RBD1, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:SEX-LETHAL PROTEIN
Authors:Inoue, M., Muto, Y., Sakamoto, H., Kigawa, T., Takio, K., Shimura, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1997-07-16
Release date:1998-07-22
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A characteristic arrangement of aromatic amino acid residues in the solution structure of the amino-terminal RNA-binding domain of Drosophila sex-lethal.
J.Mol.Biol., 272, 1997
3AOX
  • Download 3aox
  • View 3aox
Molmil generated image of 3aox
X-RAY CRYSTAL STRUCTURE OF HUMAN ANAPLASTIC LYMPHOMA KINASE IN COMPLEX WITH CH5424802
Descriptor:ALK tyrosine kinase receptor, 9-ethyl-6,6-dimethyl-8-[4-(morpholin-4-yl)piperidin-1-yl]-11-oxo-6,11-dihydro-5H-benzo[b]carbazole-3-carbonitrile, 1,2-ETHANEDIOL
Authors:Nagel, S., Moertl, M., Jestel, A., Fukami, T.A.
Deposit date:2010-10-08
Release date:2011-05-25
Last modified:2012-04-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:CH5424802, a selective ALK inhibitor capable of blocking the resistant gatekeeper mutant
Cancer Cell, 19, 2011
1CKE
  • Download 1cke
  • View 1cke
Molmil generated image of 1cke
CMP KINASE FROM ESCHERICHIA COLI FREE ENZYME STRUCTURE
Descriptor:PROTEIN (CYTIDINE MONOPHOSPHATE KINASE), SULFATE ION
Authors:Briozzo, P., Golinelli-Pimpaneau, B.
Deposit date:1998-09-24
Release date:1999-09-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of escherichia coli CMP kinase alone and in complex with CDP: a new fold of the nucleoside monophosphate binding domain and insights into cytosine nucleotide specificity.
Structure, 6, 1998
2DY5
  • Download 2dy5
  • View 2dy5
Molmil generated image of 2dy5
CRYSTAL STRUCTURE OF RAT HEME OXYGENASE-1 IN COMPLEX WITH HEME AND 2-[2-(4-CHLOROPHENYL)ETHYL]-2-[(1H-IMIDAZOL-1-YL)METHYL]-1,3-DIOXOLANE
Descriptor:Heme oxygenase 1, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Sugishima, M., Takahashi, H., Fukuyama, K.
Deposit date:2006-09-06
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:X-ray crystallographic and biochemical characterization of the inhibitory action of an imidazole-dioxolane compound on heme oxygenase
Biochemistry, 46, 2007
2ZVU
  • Download 2zvu
  • View 2zvu
Molmil generated image of 2zvu
CRYSTAL STRUCTURE OF RAT HEME OXYGENASE-1 IN COMPLEX WITH FERROUS VERDOHEME
Descriptor:Heme oxygenase 1, 5-OXA-PROTOPORPHYRIN IX CONTAINING FE, FORMIC ACID
Authors:Sato, H., Sugishima, M., Fukuyama, K., Noguchi, M.
Deposit date:2008-11-21
Release date:2009-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of rat haem oxygenase-1 in complex with ferrous verdohaem: presence of a hydrogen-bond network on the distal side
Biochem.J., 419, 2009
3A4P
  • Download 3a4p
  • View 3a4p
Molmil generated image of 3a4p
HUMAN C-MET KINASE DOMAIN COMPLEXED WITH 6-BENZYLOXYQUINOLINE INHIBITOR
Descriptor:Hepatocyte growth factor receptor, CHLORIDE ION, ISOPROPYL ALCOHOL, ...
Authors:Fukami, T.A., Kadono, S., Yamamuro, M., Matsuura, T.
Deposit date:2009-07-13
Release date:2010-02-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Discovery of 6-benzyloxyquinolines as c-Met selective kinase inhibitors
Bioorg.Med.Chem.Lett., 20, 2010
3VW9
  • Download 3vw9
  • View 3vw9
Molmil generated image of 3vw9
HUMAN GLYOXALASE I WITH AN N-HYDROXYPYRIDONE INHIBITOR
Descriptor:Lactoylglutathione lyase, ZINC ION, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Fukami, T.A., Irie, M., Matsuura, T.
Deposit date:2012-08-10
Release date:2012-12-12
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Design and evaluation of azaindole-substituted N-hydroxypyridones as glyoxalase I inhibitors
Bioorg.Med.Chem.Lett., 22, 2012
<12>