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1RDS
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CRYSTAL STRUCTURE OF RIBONUCLEASE MS (AS RIBONUCLEASE T1 HOMOLOGUE) COMPLEXED WITH A GUANYLYL-3',5'-CYTIDINE ANALOGUE
Descriptor:RIBONUCLEASE MS, 2'-FLUOROGUANYLYL-(3'-5')-PHOSPHOCYTIDINE
Authors:Nonaka, T., Nakamura, K.T., Mitsui, Y.
Deposit date:1993-05-14
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of ribonuclease Ms (as a ribonuclease T1 homologue) complexed with a guanylyl-3',5'-cytidine analogue.
Biochemistry, 32, 1993
1RMS
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CRYSTAL STRUCTURES OF RIBONUCLEASE MS COMPLEXED WITH 3'-GUANYLIC ACID A GP*C ANALOGUE, 2'-DEOXY-2'-FLUOROGUANYLYL-3',5'-CYTIDINE
Descriptor:RIBONUCLEASE MS, GUANOSINE-3'-MONOPHOSPHATE
Authors:Nonaka, T., Mitsui, Y., Nakamura, K.T.
Deposit date:1991-12-02
Release date:1992-07-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of ribonuclease Ms (as a ribonuclease T1 homologue) complexed with a guanylyl-3',5'-cytidine analogue.
Biochemistry, 32, 1993
1WMD
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CRYSTAL STRUCTURE OF ALKALINE SERINE PROTEASE KP-43 FROM BACILLUS SP. KSM-KP43 (1.30 ANGSTROM, 100 K)
Descriptor:protease, CALCIUM ION, SULFATE ION, ...
Authors:Nonaka, T., Fujihashi, M., Kita, A., Saeki, K., Ito, S., Horikoshi, K., Miki, K.
Deposit date:2004-07-08
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Crystal Structure of an Oxidatively Stable Subtilisin-like Alkaline Serine Protease, KP-43, with a C-terminal {beta}-Barrel Domain
J.Biol.Chem., 279, 2004
1WME
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CRYSTAL STRUCTURE OF ALKALINE SERINE PROTEASE KP-43 FROM BACILLUS SP. KSM-KP43 (1.50 ANGSTROM, 293 K)
Descriptor:protease, CALCIUM ION
Authors:Nonaka, T., Fujihashi, M., Kita, A., Saeki, K., Ito, S., Horikoshi, K., Miki, K.
Deposit date:2004-07-08
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Crystal Structure of an Oxidatively Stable Subtilisin-like Alkaline Serine Protease, KP-43, with a C-terminal {beta}-Barrel Domain
J.Biol.Chem., 279, 2004
1WMF
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CRYSTAL STRUCTURE OF ALKALINE SERINE PROTEASE KP-43 FROM BACILLUS SP. KSM-KP43 (OXIDIZED FORM, 1.73 ANGSTROM)
Descriptor:protease, CALCIUM ION, 1,4-DIETHYLENE DIOXIDE, ...
Authors:Nonaka, T., Fujihashi, M., Kita, A., Saeki, K., Ito, S., Horikoshi, K., Miki, K.
Deposit date:2004-07-08
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The Crystal Structure of an Oxidatively Stable Subtilisin-like Alkaline Serine Protease, KP-43, with a C-terminal {beta}-Barrel Domain
J.Biol.Chem., 279, 2004
2CVO
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CRYSTAL STRUCTURE OF PUTATIVE N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE (AK071544) FROM RICE (ORYZA SATIVA)
Descriptor:putative Semialdehyde dehydrogenase
Authors:Nonaka, T., Kita, A., Miura-Ohnuma, J., Katoh, E., Inagaki, N., Yamazaki, T., Miki, K.
Deposit date:2005-06-10
Release date:2005-12-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of putative N-acetyl-gamma-glutamyl-phosphate reductase (AK071544) from rice (Oryza sativa)
Proteins, 61, 2005
1UD2
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CRYSTAL STRUCTURE OF CALCIUM-FREE ALPHA-AMYLASE FROM BACILLUS SP. STRAIN KSM-K38 (AMYK38)
Descriptor:amylase, SODIUM ION, GLYCEROL
Authors:Nonaka, T., Fujihashi, M., Kita, A., Hagihara, H., Ozaki, K., Ito, S., Miki, K.
Deposit date:2003-04-28
Release date:2003-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites
J.Biol.Chem., 278, 2003
1UD3
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CRYSTAL STRUCTURE OF AMYK38 N289H MUTANT
Descriptor:amylase, SODIUM ION
Authors:Nonaka, T., Fujihashi, M., Kita, A., Hagihara, H., Ozaki, K., Ito, S., Miki, K.
Deposit date:2003-04-28
Release date:2003-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites
J.Biol.Chem., 278, 2003
1UD4
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CRYSTAL STRUCTURE OF CALCIUM FREE ALPHA AMYLASE FROM BACILLUS SP. STRAIN KSM-K38 (AMYK38, IN CALCIUM CONTAINING SOLUTION)
Descriptor:amylase, SODIUM ION
Authors:Nonaka, T., Fujihashi, M., Kita, A., Hagihara, H., Ozaki, K., Ito, S., Miki, K.
Deposit date:2003-04-28
Release date:2003-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites
J.Biol.Chem., 278, 2003
1UD5
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CRYSTAL STRUCTURE OF AMYK38 WITH RUBIDIUM ION
Descriptor:amylase, SODIUM ION, RUBIDIUM ION
Authors:Nonaka, T., Fujihashi, M., Kita, A., Hagihara, H., Ozaki, K., Ito, S., Miki, K.
Deposit date:2003-04-28
Release date:2003-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites
J.Biol.Chem., 278, 2003
1UD6
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CRYSTAL STRUCTURE OF AMYK38 WITH POTASSIUM ION
Descriptor:amylase, POTASSIUM ION
Authors:Nonaka, T., Fujihashi, M., Kita, A., Hagihara, H., Ozaki, K., Ito, S., Miki, K.
Deposit date:2003-04-28
Release date:2003-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites
J.Biol.Chem., 278, 2003
1UD8
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CRYSTAL STRUCTURE OF AMYK38 WITH LITHIUM ION
Descriptor:amylase, SODIUM ION
Authors:Nonaka, T., Fujihashi, M., Kita, A., Hagihara, H., Ozaki, K., Ito, S., Miki, K.
Deposit date:2003-04-28
Release date:2003-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites
J.Biol.Chem., 278, 2003
1ITX
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CATALYTIC DOMAIN OF CHITINASE A1 FROM BACILLUS CIRCULANS WL-12
Descriptor:Glycosyl Hydrolase, GLYCEROL
Authors:Iwahori, F., Matsumoto, T., Watanabe, T., Nonaka, T.
Deposit date:2002-02-13
Release date:2002-03-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Three-dimensional structure of the catalytic domain of chitinase A1 from Bacillus circulans WL-12 at a very high resolution
PROC.JPN.ACAD.,SER.B, 75, 1999
3IWR
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CRYSTAL STRUCTURE OF CLASS I CHITINASE FROM ORYZA SATIVA L. JAPONICA
Descriptor:Chitinase, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Kezuka, Y., Watanabe, T., Nonaka, T.
Deposit date:2009-09-03
Release date:2010-04-21
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structure of full-length class I chitinase from rice revealed by X-ray crystallography and small-angle X-ray scattering.
Proteins, 78, 2010
1AHH
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7 ALPHA-HYDROXYSTEROID DEHYDROGENASE COMPLEXED WITH NAD+
Descriptor:7 ALPHA-HYDROXYSTEROID DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Tanaka, N., Nonaka, T., Mitsui, Y.
Deposit date:1995-08-25
Release date:1996-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of the binary and ternary complexes of 7 alpha-hydroxysteroid dehydrogenase from Escherichia coli.
Biochemistry, 35, 1996
1AHI
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7 ALPHA-HYDROXYSTEROID DEHYDROGENASE COMPLEXED WITH NADH AND 7-OXO GLYCOCHENODEOXYCHOLIC ACID
Descriptor:7 ALPHA-HYDROXYSTEROID DEHYDROGENASE, GLYCOCHENODEOXYCHOLIC ACID, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
Authors:Tanaka, N., Nonaka, T., Mitsui, Y.
Deposit date:1995-08-25
Release date:1996-10-14
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of the binary and ternary complexes of 7 alpha-hydroxysteroid dehydrogenase from Escherichia coli.
Biochemistry, 35, 1996
1FMC
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7-ALPHA-HYDROXYSTEROID DEHYDROGENASE COMPLEX WITH NADH AND 7-OXO GLYCOCHENODEOXYCHOLIC ACID
Descriptor:7 ALPHA-HYDROXYSTEROID DEHYDROGENASE, GLYCOCHENODEOXYCHOLIC ACID, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
Authors:Tanaka, N., Nonaka, T., Mitsui, Y.
Deposit date:1996-04-26
Release date:1996-11-08
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the binary and ternary complexes of 7 alpha-hydroxysteroid dehydrogenase from Escherichia coli.
Biochemistry, 35, 1996
2DKV
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CRYSTAL STRUCTURE OF CLASS I CHITINASE FROM ORYZA SATIVA L. JAPONICA
Descriptor:chitinase, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Kezuka, Y., Nishizawa, Y., Watanabe, T., Nonaka, T.
Deposit date:2006-04-14
Release date:2007-05-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of full-length class I chitinase from rice revealed by X-ray crystallography and small-angle X-ray scattering
Proteins, 2010
3B1C
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CRYSTAL STRUCTURE OF BETAC-S LYASE FROM STREPTOCOCCUS ANGINOSUS: INTERNAL ALDIMINE FORM
Descriptor:BetaC-S lyase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, ...
Authors:Kezuka, Y., Yoshida, Y., Nonaka, T.
Deposit date:2011-06-29
Release date:2012-06-27
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural insights into catalysis by beta C-S lyase from Streptococcus anginosus
Proteins, 80, 2012
3B1D
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CRYSTAL STRUCTURE OF BETAC-S LYASE FROM STREPTOCOCCUS ANGINOSUS IN COMPLEX WITH L-SERINE: EXTERNAL ALDIMINE FORM
Descriptor:BetaC-S lyase, PYRIDOXAL-5'-PHOSPHATE, [3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE, ...
Authors:Kezuka, Y., Yoshida, Y., Nonaka, T.
Deposit date:2011-06-29
Release date:2012-06-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural insights into catalysis by beta C-S lyase from Streptococcus anginosus
Proteins, 80, 2012
3B1E
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CRYSTAL STRUCTURE OF BETAC-S LYASE FROM STREPTOCOCCUS ANGINOSUS IN COMPLEX WITH L-SERINE: ALPHA-AMINOACRYLATE FORM
Descriptor:BetaC-S lyase, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Kezuka, Y., Yoshida, Y., Nonaka, T.
Deposit date:2011-06-29
Release date:2012-06-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural insights into catalysis by beta C-S lyase from Streptococcus anginosus
Proteins, 80, 2012
1CYD
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CARBONYL REDUCTASE COMPLEXED WITH NADPH AND 2-PROPANOL
Descriptor:CARBONYL REDUCTASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ISOPROPYL ALCOHOL
Authors:Tanaka, N., Nonaka, T., Mitsui, Y.
Deposit date:1995-09-01
Release date:1996-10-14
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the ternary complex of mouse lung carbonyl reductase at 1.8 A resolution: the structural origin of coenzyme specificity in the short-chain dehydrogenase/reductase family.
Structure, 4, 1996
5XEM
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CRYSTAL STRUCTURE OF A HYDROGEN SULFIDE-PRODUCING ENZYME (FN1220) FROM FUSOBACTERIUM NUCLEATUM IN COMPLEX WITH L-LANTHIONINE-PLP SCHIFF BASE
Descriptor:Cysteine synthase, (2R)-2-azanyl-3-[(2R)-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]sulfanyl-propanoic acid, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Kezuka, Y., Yoshida, Y., Nonaka, T.
Deposit date:2017-04-05
Release date:2018-04-11
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of a hydrogen sulfide-producing enzyme (Fn1220) from Fusobacterium nucleatum in complex with L-lanthionine-PLP Schiff base
To Be Published
5XEN
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CRYSTAL STRUCTURE OF A HYDROGEN SULFIDE-PRODUCING ENZYME (FN1220) FROM FUSOBACTERIUM NUCLEATUM IN COMPLEX WITH L-SERINE-PLP SCHIFF BASE
Descriptor:Cysteine synthase, PYRIDOXAL-5'-PHOSPHATE, SERINE, ...
Authors:Kezuka, Y., Yoshida, Y., Nonaka, T.
Deposit date:2017-04-05
Release date:2018-04-11
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of a hydrogen sulfide-producing enzyme (Fn1220) from Fusobacterium nucleatum in complex with L-serine-PLP Schiff base
To Be Published
5XEO
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CRYSTAL STRUCTURE OF A HYDROGEN SULFIDE-PRODUCING ENZYME (FN1220) FROM FUSOBACTERIUM NUCLEATUM
Descriptor:Cysteine synthase, PYRIDOXAL-5'-PHOSPHATE, ACETATE ION, ...
Authors:Kezuka, Y., Yoshida, Y., Nonaka, T.
Deposit date:2017-04-05
Release date:2018-04-11
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of a hydrogen sulfide-producing enzyme (Fn1220) from Fusobacterium nucleatum
To Be Published