Author results

1NDH
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CRYSTAL STRUCTURE OF NADH-CYTOCHROME B5 REDUCTASE FROM PIG LIVER AT 2.4 ANGSTROMS RESOLUTION
Descriptor:CYTOCHROME B5 REDUCTASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Nishida, H., Miki, K.
Deposit date:1994-10-31
Release date:1995-02-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of NADH-cytochrome b5 reductase from pig liver at 2.4 A resolution.
Biochemistry, 34, 1995
2CFM
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ATP-DEPENDENT DNA LIGASE FROM PYROCOCCUS FURIOSUS
Descriptor:THERMOSTABLE DNA LIGASE, MAGNESIUM ION, ADENOSINE MONOPHOSPHATE
Authors:Nishida, H., Ishino, Y., Morikawa, K.
Deposit date:2006-02-22
Release date:2006-07-12
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Closed Structure of an Archaeal DNA Ligase from Pyrococcus Furiosus.
J.Mol.Biol., 360, 2006
3A2F
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CRYSTAL STRUCTURE OF PYROCOCCUS FURIOSUS DNA POLYMERASE/PCNA MONOMER MUTANT COMPLEX
Descriptor:DNA polymerase, DNA polymerase sliding clamp
Authors:Nishida, H., Ishino, Y., Morikawa, K.
Deposit date:2009-05-15
Release date:2009-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Structural determinant for switching between the polymerase and exonuclease modes in the PCNA-replicative DNA polymerase complex
To be Published
1IOE
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HUMAN COAGULATION FACTOR XA IN COMPLEX WITH M55532
Descriptor:COAGULATION FACTOR XA, CALCIUM ION, (-)-7-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]TETRAHYDRO-8A-(METHOXYMETHYL)-1'-(4-PYRIDINYL)-SPIRO[5H-OXAZOLO[3,2-A]PYRAZINE-2(3H),4'-PIPERIDIN]-5-ONE
Authors:Shiromizu, I., Matsusue, T.
Deposit date:2001-03-08
Release date:2003-09-23
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Factor Xa Specific Inhibitor That Induces the Novel Binding Model In Complex With Human FXa
To be Published
1IQE
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HUMAN COAGULATION FACTOR XA IN COMPLEX WITH M55590
Descriptor:coagulation Factor Xa, CALCIUM ION, 4-[(2R)-3-[[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]AMINO]-1-OXO-2-[[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]AMINO]PROPYL]-THIOMORPHOLINE-1,1-DIOXIDE
Authors:Shiromizu, I., Matsusue, T.
Deposit date:2001-07-23
Release date:2003-09-23
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Factor Xa Specific Inhibitor that Induces the Novel Binding Model in Complex with Human Fxa
To be Published
1IQF
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HUMAN COAGULATION FACTOR XA IN COMPLEX WITH M55165
Descriptor:coagulation Factor Xa, CALCIUM ION, (2R)-4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-6-OXO-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]-2-PIPERAZINECARBOXYLIC ACID ETHYL ESTER
Authors:Shiromizu, I., Matsusue, T.
Deposit date:2001-07-23
Release date:2003-09-23
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Factor Xa Specific Inhibitor that Induces the Novel Binding Model in Complex with Human Fxa
To be Published
1IQG
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HUMAN COAGULATION FACTOR XA IN COMPLEX WITH M55159
Descriptor:coagulation Factor Xa, CALCIUM ION, 4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-1-[[4-HYDROXYIMINOMETHYL-1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]PIPERAZINONE
Authors:Shiromizu, I., Matsusue, T.
Deposit date:2001-07-23
Release date:2003-09-23
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Factor Xa Specific Inhibitor that Induces the Novel Binding Model in Complex with Human Fxa
To be Published
1IQH
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HUMAN COAGULATION FACTOR XA IN COMPLEX WITH M55143
Descriptor:coagulation Factor Xa, CALCIUM ION, 4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-1-[[4-HYDROXYMETHYL-1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]PIPERAZINONE
Authors:Shiromizu, I., Matsusue, T.
Deposit date:2001-07-23
Release date:2003-09-23
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Factor Xa Specific Inhibitor that Induces the Novel Binding Model in Complex with Human Fxa
To be Published
1IQI
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HUMAN COAGULATION FACTOR XA IN COMPLEX WITH M55125
Descriptor:coagulation Factor Xa, CALCIUM ION, 4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL] METHYL]-2-PIPERAZINECARBOXYLIC ACID
Authors:Shiromizu, I., Matsusue, T.
Deposit date:2001-07-23
Release date:2003-09-23
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Factor Xa Specific Inhibitor that Induces the Novel Binding Model in Complex with Human Fxa
To be Published
1IQJ
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HUMAN COAGULATION FACTOR XA IN COMPLEX WITH M55124
Descriptor:coagulation Factor Xa, CALCIUM ION, 4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]-2-PIPERAZINECARBOXYLIC ACID ETHYL ESTER
Authors:Shiromizu, I., Matsusue, T.
Deposit date:2001-07-23
Release date:2003-09-23
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Factor Xa Specific Inhibitor that Induces the Novel Binding Model in Complex with Human Fxa
To be Published
1IQK
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HUMAN COAGULATION FACTOR XA IN COMPLEX WITH M55113
Descriptor:coagulation Factor Xa, CALCIUM ION, 4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]PIPERAZINONE
Authors:Shiromizu, I., Matsusue, T.
Deposit date:2001-07-23
Release date:2003-09-23
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Factor Xa Specific Inhibitor that Induces the Novel Binding Model in Complex with Human Fxa
To be Published
1IQL
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HUMAN COAGULATION FACTOR XA IN COMPLEX WITH M54476
Descriptor:coagulation Factor Xa, CALCIUM ION, 4-[[(1E)-2-(4-CHLOROPHENYL)ETHENYL]SULFONYL]-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]PIPERAZINONE
Authors:Shiromizu, I., Matsusue, T.
Deposit date:2001-07-23
Release date:2003-09-23
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Factor Xa Specific Inhibitor that Induces the Novel Binding Model in Complex with Human Fxa
To be Published
1IQM
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HUMAN COAGULATION FACTOR XA IN COMPLEX WITH M54471
Descriptor:coagulation Factor Xa, CALCIUM ION, 1-[[(1E)-2-(4-CHLOROPHENYL)ETHENYL]SULFONYL]-4-[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]PIPERAZINE
Authors:Shiromizu, I., Matsusue, T.
Deposit date:2001-07-23
Release date:2003-09-23
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Factor Xa Specific Inhibitor that Induces the Novel Binding Model in Complex with Human Fxa
To be Published
1IQN
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HUMAN COAGULATION FACTOR XA IN COMPLEX WITH M55192
Descriptor:coagulation Factor Xa, CALCIUM ION, 4-[[4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-6-OXO-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]-2-PIPERAZINYL]CARBONYL]MORPHOLINE
Authors:Shiromizu, I., Matsusue, T.
Deposit date:2001-07-23
Release date:2003-09-23
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Factor Xa Specific Inhibitor that Induces the Novel Binding Model in Complex with Human Fxa
To be Published
3VPB
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ARGX FROM SULFOLOBUS TOKODAII COMPLEXED WITH LYSW/GLU/ADP/MG/ZN/SULFATE
Descriptor:Putative acetylornithine deacetylase, Alpha-aminoadipate carrier protein lysW, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Tomita, T., Ouchi, T., Kuzuyama, T., Nishiyama, M.
Deposit date:2012-02-29
Release date:2013-02-27
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus
Nat.Chem.Biol., 9, 2013
3VPC
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ARGX FROM SULFOLOBUS TOKODAII COMPLEXED WITH ADP
Descriptor:Putative acetylornithine deacetylase, ADENOSINE-5'-DIPHOSPHATE
Authors:Tomita, T., Horie, A., Kuzuyama, T., Nishiyama, M.
Deposit date:2012-02-29
Release date:2013-02-27
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus.
Nat.Chem.Biol., 9, 2013
3VPD
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LYSX FROM THERMUS THERMOPHILUS COMPLEXED WITH AMP-PNP
Descriptor:Ribosomal protein S6 modification protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, BUTANOIC ACID, ...
Authors:Tomita, T., Ouchi, T., Kuzuyama, T., Nishiyama, M.
Deposit date:2012-02-29
Release date:2013-02-27
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus.
Nat.Chem.Biol., 9, 2013
5HN3
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CRYSTAL STRUCTURE OF BETA-DECARBOXYLATING DEHYDROGENASE (TK0280) FROM THERMOCOCCUS KODAKARENSIS (APO FORM)
Descriptor:Homoisocitrate dehydrogenase, IMIDAZOLE, SODIUM ION
Authors:Shimizu, T., Tomita, T., Nishiyama, M.
Deposit date:2016-01-18
Release date:2016-12-07
Last modified:2017-01-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and function of an ancestral-type beta-decarboxylating dehydrogenase from Thermococcus kodakarensis
Biochem. J., 474, 2017
5HN4
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CRYSTAL STRUCTURE OF BETA-DECARBOXYLATING DEHYDROGENASE (TK0280) FROM THERMOCOCCUS KODAKARENSIS COMPLEXED WITH MN AND HOMOISOCITRATE
Descriptor:Homoisocitrate dehydrogenase, (1R,2S)-1-hydroxybutane-1,2,4-tricarboxylic acid, MANGANESE (II) ION, ...
Authors:Shimizu, T., Tomita, T., Nishiyama, M.
Deposit date:2016-01-18
Release date:2016-12-07
Last modified:2017-01-04
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structure and function of an ancestral-type beta-decarboxylating dehydrogenase from Thermococcus kodakarensis
Biochem. J., 474, 2017
5HN5
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CRYSTAL STRUCTURE OF BETA-DECARBOXYLATING DEHYDROGENASE (TK0280) FROM THERMOCOCCUS KODAKARENSIS COMPLEXED WITH MN AND ISOCITRATE
Descriptor:Homoisocitrate dehydrogenase, ISOCITRIC ACID, MANGANESE (II) ION, ...
Authors:Shimizu, T., Tomita, T., Nishiyama, M.
Deposit date:2016-01-18
Release date:2016-12-07
Last modified:2017-01-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure and function of an ancestral-type beta-decarboxylating dehydrogenase from Thermococcus kodakarensis
Biochem. J., 474, 2017
5HN6
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CRYSTAL STRUCTURE OF BETA-DECARBOXYLATING DEHYDROGENASE (TK0280) FROM THERMOCOCCUS KODAKARENSIS COMPLEXED WITH MN AND 3-ISOPROPYLMALATE
Descriptor:Homoisocitrate dehydrogenase, 3-ISOPROPYLMALIC ACID, MANGANESE (II) ION, ...
Authors:Shimizu, T., Tomita, T., Nishiyama, M.
Deposit date:2016-01-18
Release date:2016-12-07
Last modified:2017-01-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and function of an ancestral-type beta-decarboxylating dehydrogenase from Thermococcus kodakarensis
Biochem. J., 474, 2017
1QNF
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STRUCTURE OF PHOTOLYASE
Descriptor:PHOTOLYASE, FLAVIN-ADENINE DINUCLEOTIDE, 8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE
Authors:Miki, K., Kitadokoro, K.
Deposit date:1997-07-04
Release date:1998-01-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of DNA photolyase from Anacystis nidulans
Nat.Struct.Biol., 4, 1997