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3AU2
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DNA POLYMERASE X FROM THERMUS THERMOPHILUS HB8 COMPLEXED WITH CA-DGTP
Descriptor:DNA polymerase beta family (X family), 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ZINC ION, ...
Authors:Nakane, S., Ishikawa, H., Wakamatsu, T., Nakagawa, N., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-01-28
Release date:2012-01-25
Last modified:2013-12-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AU6
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DNA POLYMERASE X FROM THERMUS THERMOPHILUS HB8 TERNARY COMPLEX WITH PRIMER/TEMPLATE DNA AND DDGTP
Descriptor:DNA polymerase beta family (X family), 5'-D(*CP*AP*GP*TP*AP*TP*(DDG))-3', 5'-D(*CP*GP*GP*CP*CP*AP*TP*AP*CP*TP*G)-3', ...
Authors:Nakane, S., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-01-28
Release date:2012-01-25
Last modified:2013-12-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AUO
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DNA POLYMERASE X FROM THERMUS THERMOPHILUS HB8 TERNARY COMPLEX WITH 1-NT GAPPED DNA AND DDGTP
Descriptor:DNA polymerase beta family (X family), 1-nt gapped DNA, 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Nakane, S., Nakagawa, N., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-02-11
Release date:2012-01-25
Last modified:2013-12-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AYT
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TTHB071 PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative uncharacterized protein TTHB071, ZINC ION
Authors:Nakane, S., Wakamatsu, T., Fukui, K., Nakagawa, N., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-05-17
Release date:2011-10-19
Last modified:2014-01-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress
J.Biol.Chem., 286, 2011
3AYV
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TTHB071 PROTEIN FROM THERMUS THERMOPHILUS HB8 SOAKING WITH ZNCL2
Descriptor:Putative uncharacterized protein TTHB071, ZINC ION
Authors:Nakane, S., Wakamatsu, T., Fukui, K., Nakagawa, N., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-05-17
Release date:2011-10-19
Last modified:2014-01-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress
J.Biol.Chem., 286, 2011
3B0X
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K263A MUTANT OF POLX FROM THERMUS THERMOPHILUS HB8 COMPLEXED WITH CA-DGTP
Descriptor:DNA polymerase beta family (X family), ZINC ION, CALCIUM ION, ...
Authors:Nakane, S., Nakagawa, N., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-06-17
Release date:2012-05-02
Last modified:2012-06-20
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3B0Y
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K263D MUTANT OF POLX FROM THERMUS THERMOPHILUS HB8 COMPLEXED WITH CA-DGTP
Descriptor:DNA polymerase beta family (X family), 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ZINC ION, ...
Authors:Nakane, S., Nakagawa, N., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-06-17
Release date:2012-05-02
Last modified:2012-06-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
3AAL
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CRYSTAL STRUCTURE OF ENDONUCLEASE IV FROM GEOBACILLUS KAUSTOPHILUS
Descriptor:Probable endonuclease 4, CACODYLATE ION, FE (III) ION, ...
Authors:Asano, R., Ishikawa, H., Nakane, S., Nakagawa, N., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-11-20
Release date:2010-12-01
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA
Acta Crystallogr.,Sect.D, 67, 2011
3AAM
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CRYSTAL STRUCTURE OF ENDONUCLEASE IV FROM THERMUS THERMOPHILUS HB8
Descriptor:Endonuclease IV, MANGANESE (II) ION, PHOSPHATE ION
Authors:Asano, R., Ishikawa, H., Nakane, S., Baba, S., Nakagawa, N., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-11-20
Release date:2010-12-01
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA
Acta Crystallogr.,Sect.D, 67, 2011