Author results

1WDV
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CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN APE2540
Descriptor:hypothetical protein APE2540
Authors:Murayama, K., Kato-Murayama, M., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-18
Release date:2004-11-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a putative trans-editing enzyme for prolyl-tRNA synthetase from Aeropyrum pernix K1 at 1.7 A resolution.
Acta Crystallogr.,Sect.F, 61, 2005
3VTA
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CRYSTAL STRUCTURE OF CUCUMISIN, A SUBTILISIN-LIKE ENDOPROTEASE FROM CUCUMIS MELO L
Descriptor:Cucumisin, DIISOPROPYL PHOSPHONATE, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Murayama, K., Kato-Murayama, M., Hosaka, T., Sotokawauchi, A., Shirouzu, M., Arima, K., Yokoyama, S.
Deposit date:2012-05-23
Release date:2012-08-08
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of cucumisin, a subtilisin-like endoprotease from Cucumis melo L
J.Mol.Biol., 423, 2012
2DX1
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CRYSTAL STRUCTURE OF RHOGEF PROTEIN ASEF
Descriptor:Rho guanine nucleotide exchange factor 4
Authors:Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-22
Release date:2007-01-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal structure of the rac activator, Asef, reveals its autoinhibitory mechanism
J.Biol.Chem., 282, 2007
2CWP
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CRYSTAL STRUCTURE OF METRS RELATED PROTEIN FROM PYROCOCCUS HORIKOSHII
Descriptor:MetRS related protein
Authors:Murayama, K., Kato-Murayama, M., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-23
Release date:2005-12-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of MetRS related protein from Pyrococcus horikoshii
To be Published
2Z0K
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CRYSTAL STRUCTURE OF PROX-ALASA COMPLEX FROM T. THERMOPHILUS
Descriptor:Putative uncharacterized protein TTHA1699, '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE
Authors:Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of ProX-AlaSA complex from T. thermophilus
to be published
2Z0L
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CRYSTAL STRUCTURE OF EBV-DNA POLYMERASE ACCESSORY PROTEIN BMRF1
Descriptor:Early antigen protein D, CHLORIDE ION
Authors:Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of Epstein-Barr virus DNA polymerase processivity factor BMRF1
J.Biol.Chem., 284, 2009
2Z0N
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CRYSTAL STRUCTURE OF APPL1-BAR DOMAIN
Descriptor:DCC-interacting protein 13-alpha
Authors:Murayama, K., Kato-Murayama, M., Sakamoto, A., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of APPL1-BAR domain
To be Published
2Z0O
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CRYSTAL STRUCTURE OF APPL1-BAR-PH DOMAIN
Descriptor:DCC-interacting protein 13-alpha
Authors:Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of APPL1-BAR-PH domain
To be Published
2Z0P
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CRYSTAL STRUCTURE OF PH DOMAIN OF BRUTON'S TYROSINE KINASE
Descriptor:Tyrosine-protein kinase BTK, ZINC ION, (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXYBUTOXY)PROPYL BUTYRATE
Authors:Murayama, K., Kato-Murayama, M., Mishima, C., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2015-07-08
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of the Bruton's tyrosine kinase PH domain with phosphatidylinositol
Biochem.Biophys.Res.Commun., 377, 2008
2Z0Q
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CRYSTAL STRUCTURE OF DH-PH DOMAIN OF RHOGEF3(XPLN)
Descriptor:Rho guanine nucleotide exchange factor 3, SULFATE ION
Authors:Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structure of the Rho-specific guanine nucleotide-exchange factor Xpln
Acta Crystallogr.,Sect.F, 68, 2012
2Z0R
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CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN TTHA0547
Descriptor:Putative uncharacterized protein TTHA0547, SULFATE ION, CHLORIDE ION
Authors:Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of hypothetical protein TTHA0547
to be published
2Z0S
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CRYSTAL STRUCTURE OF PUTATIVE EXOSOME COMPLEX RNA-BINDING PROTEIN
Descriptor:Probable exosome complex RNA-binding protein 1
Authors:Murayama, K., Kato-Murayama, M., Takemoto, C., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of putative exosome complex RNA-binding protein
To be Published
2Z0U
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CRYSTAL STRUCTURE OF C2 DOMAIN OF KIBRA PROTEIN
Descriptor:WW domain-containing protein 1
Authors:Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of C2 domain of KIBRA protein
To be Published
2Z0V
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CRYSTAL STRUCTURE OF BAR DOMAIN OF ENDOPHILIN-III
Descriptor:SH3-containing GRB2-like protein 3
Authors:Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of BAR domain of Endophilin-III
To be Published
2Z0X
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CRYSTAL STRUCTURE OF PROX-CYSSA COMPLEX FROM T. THERMOPHILUS
Descriptor:Putative uncharacterized protein TTHA1699, 5'-O-(N-(L-CYSTEINYL)-SULFAMOYL)ADENOSINE
Authors:Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of ProX-CysSA complex from T. thermophilus
To be Published
2Z11
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CRYSTAL STRUCTURE OF PUTATIVE ACETYLTRANSFERASE
Descriptor:Ribosomal-protein-alanine acetyltransferase
Authors:Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of putative acetyltransferase
To be Published
3WPQ
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CRYSTAL STRUCTURE OF THE GAP DOMAIN OF MGCRACGAP(S387A)
Descriptor:Rac GTPase-activating protein 1
Authors:Murayama, K., Kato-Murayama, M., Shirouzu, M., Kitamura, T., Yokoyama, S.
Deposit date:2014-01-15
Release date:2015-01-21
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:crystal structure of the GAP domain of MgcRacGAP
To be Published
3WPS
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CRYSTAL STRUCTURE OF THE GAP DOMAIN OF MGCRACGAP(S387D)
Descriptor:Rac GTPase-activating protein 1, SULFATE ION
Authors:Murayama, K., Kato-murayama, M., Shirouzu, M., Kitamura, T., Yokoyama, S.
Deposit date:2014-01-15
Release date:2015-01-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:crystal structure of the GAP domain of MgcRacGAP
To be Published
5C2J
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COMPLEX STRUCTURE OF THE GAP DOMAIN OF MGCRACGAP AND CDC42
Descriptor:Rac GTPase-activating protein 1, Cell division control protein 42 homolog, MAGNESIUM ION, ...
Authors:Murayama, K., Kato-Murayama, M., Hosaka, T., Kitamura, T., Yokoyama, S., Shirouzu, M.
Deposit date:2015-06-16
Release date:2016-06-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of G-protein target alternation of MgcRacGAP by phospholylation
To Be Published
5C2K
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CRYSTAL STRUCTURE OF THE FUSION PROTEIN LINKED BY RHOA AND THE GAP DOMAIN OF MGCRACGAP
Descriptor:Transforming protein RhoA,Rac GTPase-activating protein 1, MAGNESIUM ION, ALUMINUM FLUORIDE, ...
Authors:Murayama, K., Kato-Murayama, M., Hosaka, T., Kitamura, T., Yokoyama, S., Shirouzu, M.
Deposit date:2015-06-16
Release date:2016-06-22
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural basis of G-protein target alternation of MgcRacGAP by phospholylation
To Be Published
2Z0T
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CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN PH0355
Descriptor:Putative uncharacterized protein PH0355
Authors:Murayama, K., Takemoto, C., Kato-Murayama, M., Kawazoe, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of hypothetical protein PH0355
To be Published
4HYQ
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CRYSTAL STRUCTURE OF PHOSPHOLIPASE A1 FROM STREPTOMYCES ALBIDOFLAVUS NA297
Descriptor:phospholipase A1, PENTAETHYLENE GLYCOL
Authors:Murayama, K., Sugimori, D.
Deposit date:2012-11-14
Release date:2013-05-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of phospholipase A1 from Streptomyces albidoflavus NA297
J.Struct.Biol., 182, 2013
1IRQ
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CRYSTAL STRUCTURE OF OMEGA TRANSCRIPTIONAL REPRESSOR AT 1.5A RESOLUTION
Descriptor:omega transcriptional repressor
Authors:Murayama, K., Orth, P., De La Hoz, A.B., Alonso, J.C., Saenger, W.
Deposit date:2001-10-11
Release date:2001-12-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of omega transcriptional repressor encoded by Streptococcus pyogenes plasmid pSM19035 at 1.5 A resolution.
J.Mol.Biol., 314, 2001
1UFO
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CRYSTAL STRUCTURE OF TT1662 FROM THERMUS THERMOPHILUS
Descriptor:hypothetical protein TT1662
Authors:Murayama, K., Shirouzu, M., Terada, T., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-03
Release date:2003-12-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of TT1662 from Thermus thermophilus HB8: a member of the alpha/beta hydrolase fold enzymes.
Proteins, 58, 2005
1V6Z
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CRYSTAL STRUCTURE OF TT1573 FROM THERMUS THERMOPHILUS
Descriptor:hypothetical protein TTHA0657
Authors:Murayama, K., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-12-05
Release date:2004-12-14
Last modified:2018-08-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of TT1573 from Thermus thermophilus
To be Published