Author results

1PD2
  • Download 1pd2
  • View 1pd2
Molmil generated image of 1pd2
CRYSTAL STRUCTURE OF HEMATOPOIETIC PROSTAGLANDIN D SYNTHASE COMPLEX WITH GLUTATHIONE
Descriptor:HEMATOPOIETIC PROSTAGLANDIN D SYNTHASE, GLUTATHIONE
Authors:Miyano, M., Ago, H.
Deposit date:1998-12-14
Release date:1999-10-13
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cloning and crystal structure of hematopoietic prostaglandin D synthase.
Cell(Cambridge,Mass.), 90, 1997
2YW9
  • Download 2yw9
  • View 2yw9
Molmil generated image of 2yw9
CRYSTAL STRUCTURE OF TT0143 FROM THERMUS THERMOPHILUS HB8
Descriptor:Enoyl-[acyl carrier protein] reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Miyano, M., Ago, H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-05-15
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of TT0143 from Thermus thermophilus HB8
To be Published
2ZIY
  • Download 2ziy
  • View 2ziy
Molmil generated image of 2ziy
CRYSTAL STRUCTURE OF SQUID RHODOPSIN
Descriptor:Rhodopsin, RETINAL, PALMITIC ACID
Authors:Miyano, M., Shimamura, T.
Deposit date:2008-02-27
Release date:2008-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal structure of squid rhodopsin with intracellularly extended cytoplasmic region
J.Biol.Chem., 283, 2008
1APA
  • Download 1apa
  • View 1apa
Molmil generated image of 1apa
X-RAY STRUCTURE OF A POKEWEED ANTIVIRAL PROTEIN, CODED BY A NEW GENOMIC CLONE, AT 0.23 NM RESOLUTION. A MODEL STRUCTURE PROVIDES A SUITABLE ELECTROSTATIC FIELD FOR SUBSTRATE BINDING.
Descriptor:POKEWEED ANTIVIRAL PROTEIN
Authors:Ago, H., Kataoka, J., Tsuge, H., Habuka, N., Inagaki, E., Noma, M., Miyano, M.
Deposit date:1993-09-21
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray structure of a pokeweed antiviral protein, coded by a new genomic clone, at 0.23 nm resolution. A model structure provides a suitable electrostatic field for substrate binding.
Eur.J.Biochem., 225, 1994
2CZT
  • Download 2czt
  • View 2czt
Molmil generated image of 2czt
LIPOCALIN-TYPE PROSTAGLANDIN D SYNTHASE
Descriptor:Prostaglandin-H2 D-isomerase
Authors:Kumasaka, T., Irikura, D., Ago, H., Aritake, K., Yamamoto, M., Inoue, T., Miyano, M., Urade, Y., Hayaishi, O., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-17
Release date:2006-10-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of the catalytic mechanism operating in open-closed conformers of lipocalin type prostaglandin D synthase.
J.Biol.Chem., 284, 2009
2CZU
  • Download 2czu
  • View 2czu
Molmil generated image of 2czu
LIPOCALIN-TYPE PROSTAGLANDIN D SYNTHASE
Descriptor:Prostaglandin-H2 D-isomerase
Authors:Kumasaka, T., Irikura, D., Ago, H., Aritake, K., Yamamoto, M., Inoue, T., Miyano, M., Urade, Y., Hayaishi, O., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-17
Release date:2006-10-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the catalytic mechanism operating in open-closed conformers of lipocalin type prostaglandin D synthase.
J.Biol.Chem., 284, 2009
2EQL
  • Download 2eql
  • View 2eql
Molmil generated image of 2eql
CRYSTALLOGRAPHIC STUDIES OF A CALCIUM BINDING LYSOZYME FROM EQUINE MILK AT 2.5 ANGSTROMS RESOLUTION
Descriptor:HORSE MILK LYSOZYME
Authors:Tsuge, H., Ago, H., Miyano, M.
Deposit date:1994-05-27
Release date:1994-07-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic studies of a calcium binding lysozyme from equine milk at 2.5 A resolution.
J.Biochem.(Tokyo), 111, 1992
3PCV
  • Download 3pcv
  • View 3pcv
Molmil generated image of 3pcv
CRYSTAL STRUCTURE ANALYSIS OF HUMAN LEUKOTRIENE C4 SYNTHASE AT 1.9 ANGSTROM RESOLUTION
Descriptor:Leukotriene C4 synthase, GLUTATHIONE, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Saino, H., Ago, H., Miyano, M.
Deposit date:2010-10-22
Release date:2011-03-16
Last modified:2011-12-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The catalytic architecture of leukotriene C4 synthase with two arginine residues
J.Biol.Chem., 286, 2011
1F88
  • Download 1f88
  • View 1f88
Molmil generated image of 1f88
CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Descriptor:RHODOPSIN, N-ACETYL-D-GLUCOSAMINE, MERCURY (II) ION, ...
Authors:Okada, T., Palczewski, K., Stenkamp, R.E., Miyano, M.
Deposit date:2000-06-29
Release date:2000-08-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of rhodopsin: A G protein-coupled receptor.
Science, 289, 2000
1HAK
  • Download 1hak
  • View 1hak
Molmil generated image of 1hak
CRYSTAL STRUCTURE OF RECOMBINANT HUMAN PLACENTAL ANNEXIN V COMPLEXED WITH K-201 AS A CALCIUM CHANNEL ACTIVITY INHIBITOR
Descriptor:ANNEXIN V, 4-[3-{1-(4-BENZYL)PIPERODINYL}PROPIONYL]-7-METHOXY-2,3,4,5-TERTRAHYDRO-1,4-BENZOTHIAZEPINE
Authors:Ago, H., Inagaki, E., Miyano, M.
Deposit date:1997-12-10
Release date:1999-02-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of annexin V with its ligand K-201 as a calcium channel activity inhibitor.
J.Mol.Biol., 274, 1997
1J1Y
  • Download 1j1y
  • View 1j1y
Molmil generated image of 1j1y
CRYSTAL STRUCTURE OF PAAI FROM THERMUS THERMOPHILUS HB8
Descriptor:PaaI protein, CHLORIDE ION, MAGNESIUM ION
Authors:Kunishima, N., Sugahara, M., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2004-02-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
1J2W
  • Download 1j2w
  • View 1j2w
Molmil generated image of 1j2w
TETRAMERIC STRUCTURE OF ALDOLASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Aldolase protein
Authors:Lokanath, N.K., Shiromizu, I., Miyano, M., Yokoyama, S., Kuramitsu, S., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-01-14
Release date:2003-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of aldolase from Thermus thermophilus HB8 showing the contribution of oligomeric state to thermostability.
Acta Crystallogr.,Sect.D, 60, 2004
1OD6
  • Download 1od6
  • View 1od6
Molmil generated image of 1od6
THE CRYSTAL STRUCTURE OF PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH 4'-PHOSPHOPANTETHEINE
Descriptor:PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE, 4'-PHOSPHOPANTETHEINE, SULFATE ION
Authors:Takahashi, H., Inagaki, E., Miyano, M., Tahirov, T.H.
Deposit date:2003-02-13
Release date:2003-03-13
Last modified:2015-12-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and Implications for the Thermal Stability of Phosphopantetheine Adenylyltransferase from Thermus Thermophilus.
Acta Crystallogr.,Sect.D, 60, 2004
1ODI
  • Download 1odi
  • View 1odi
Molmil generated image of 1odi
PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS
Descriptor:PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION, ADENOSINE
Authors:Tahirov, T.H., Inagaki, E., Miyano, M.
Deposit date:2003-02-19
Release date:2003-02-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus
J.Mol.Biol., 337, 2004
1ODJ
  • Download 1odj
  • View 1odj
Molmil generated image of 1odj
PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS
Descriptor:PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION, GUANOSINE
Authors:Tahirov, T.H., Inagaki, E., Miyano, M.
Deposit date:2003-02-19
Release date:2003-03-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus
J.Mol.Biol., 337, 2004
1ODK
  • Download 1odk
  • View 1odk
Molmil generated image of 1odk
PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS
Descriptor:PURINE NUCLEOSIDE PHOSPHORYLASE, GLYCEROL
Authors:Tahirov, T.H., Inagaki, E., Miyano, M.
Deposit date:2003-02-19
Release date:2003-02-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus
J.Mol.Biol., 337, 2004
1ODL
  • Download 1odl
  • View 1odl
Molmil generated image of 1odl
PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS
Descriptor:PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION, GLYCEROL, ...
Authors:Tahirov, T.H., Inagaki, E., Miyano, M.
Deposit date:2003-02-19
Release date:2003-02-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus
J.Mol.Biol., 337, 2004
1QUV
  • Download 1quv
  • View 1quv
Molmil generated image of 1quv
CRYSTAL STRUCTURE OF THE RNA DIRECTED RNA POLYMERASE OF HEPATITIS C VIRUS
Descriptor:PROTEIN (RNA-DIRECTED RNA POLYMERASE)
Authors:Ago, H., Miyano, M., Adachi, T., Habuka, N.
Deposit date:1999-07-04
Release date:1999-11-05
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the RNA-dependent RNA polymerase of hepatitis C virus.
Structure Fold.Des., 7, 1999
1UB3
  • Download 1ub3
  • View 1ub3
Molmil generated image of 1ub3
CRYSTAL STRUCTURE OF TETRAMERIC STRUCTURE OF ALDOLASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Aldolase protein, 1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE
Authors:Lokanath, N.K., Miyano, M., Yokoyama, S., Kuramitsu, S., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-03-28
Release date:2003-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of aldolase from Thermus thermophilus HB8 showing the contribution of oligomeric state to thermostability.
Acta Crystallogr.,Sect.D, 60, 2004
1UJ4
  • Download 1uj4
  • View 1uj4
Molmil generated image of 1uj4
CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RIBOSE-5-PHOSPHATE ISOMERASE
Descriptor:ribose 5-phosphate isomerase, CHLORIDE ION
Authors:Hamada, K., Ago, H., Sugahara, M., Nodake, Y., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-26
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)
J.Biol.Chem., 278, 2003
1UJ5
  • Download 1uj5
  • View 1uj5
Molmil generated image of 1uj5
CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RIBOSE-5-PHOSPHATE ISOMERASE COMPLEXED WITH RIBOSE-5-PHOSPHATE
Descriptor:ribose 5-phosphate isomerase, RIBULOSE-5-PHOSPHATE, CHLORIDE ION
Authors:Hamada, K., Ago, H., Sugahara, M., Nodake, Y., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-26
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)
J.Biol.Chem., 278, 2003
1UJ6
  • Download 1uj6
  • View 1uj6
Molmil generated image of 1uj6
CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS RIBOSE-5-PHOSPHATE ISOMERASE COMPLEXED WITH ARABINOSE-5-PHOSPHATE
Descriptor:ribose 5-phosphate isomerase, CHLORIDE ION, ARABINOSE-5-PHOSPHATE
Authors:Hamada, K., Ago, H., Sugahara, M., Nodake, Y., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-26
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)
J.Biol.Chem., 278, 2003
1ULQ
  • Download 1ulq
  • View 1ulq
Molmil generated image of 1ulq
CRYSTAL STRUCTURE OF TT0182 FROM THERMUS THERMOPHILUS HB8
Descriptor:putative acetyl-CoA acetyltransferase
Authors:Ago, H., Hamada, K., Ida, K., Kanda, H., Sugahara, M., Yamamoto, M., Kuroishi, C., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-09-16
Release date:2004-11-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of tt0182 from Thermus thermophilus HB8
To be Published
1ULR
  • Download 1ulr
  • View 1ulr
Molmil generated image of 1ulr
CRYSTAL STRUCTURE OF TT0497 FROM THERMUS THERMOPHILUS HB8
Descriptor:putative acylphosphatase
Authors:Ago, H., Hamada, K., Sugahara, M., Kuroishi, C., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-09-16
Release date:2004-11-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of tt0497 from Thermus thermophilus HB8
To be Published
1ULS
  • Download 1uls
  • View 1uls
Molmil generated image of 1uls
CRYSTAL STRUCTURE OF TT0140 FROM THERMUS THERMOPHILUS HB8
Descriptor:putative 3-oxoacyl-acyl carrier protein reductase
Authors:Hisanaga, Y., Ago, H., Hamada, K., Sugahara, M., Nodake, Y., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-09-16
Release date:2004-11-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of tt0140 from Thermus thermophilus HB8
To be Published
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2019 Protein Data Bank Japan