4XB0
| Structure of the Plk2 polo-box domain | Descriptor: | CHLORIDE ION, PHOSPHATE ION, Serine/threonine-protein kinase PLK2 | Authors: | Kim, J.H, Ku, B, Kim, S.J. | Deposit date: | 2014-12-16 | Release date: | 2015-05-06 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.701 Å) | Cite: | Structural analysis of the polo-box domain of human Polo-like kinase 2 Proteins, 83, 2015
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2KQK
| Solution structure of apo-IscU(D39A) | Descriptor: | NifU-like protein | Authors: | Kim, J.H, Fuzery, A.K, Tonelli, M, Vickery, L.E, Markley, J.L. | Deposit date: | 2009-11-10 | Release date: | 2010-11-17 | Last modified: | 2024-05-08 | Method: | SOLUTION NMR | Cite: | Three-Dimensional Structure and Determinants of Stability of the Iron-Sulfur Cluster Scaffold Protein IscU from Escherichia coli. Biochemistry, 51, 2012
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6ICO
| Pseudomonas putida CBB5 NdmA with theophylline | Descriptor: | COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICM
| Pseudomonas putida CBB5 NdmA with ferredoxin domain of NdmD | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.961 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICK
| Pseudomonas putida CBB5 NdmA | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.952 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICP
| Pseudomonas putida CBB5 NdmA QL mutant with caffeine | Descriptor: | CAFFEINE, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICN
| Pseudomonas putida CBB5 NdmA with caffeine | Descriptor: | CAFFEINE, COBALT (II) ION, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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6ICQ
| Pseudomonas putida CBB5 NdmA QL mutant with theobromine | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N1-demethylase NdmA, ... | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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7YMG
| Crystal structure of BRD4 bromodomain 1 (BD1) in complex with 2-({3-ethyl-[1,2,4]triazolo[4,3-b]pyridazin-6-yl}amino)-3-(1H-indol-3-yl)propan-1-ol | Descriptor: | (2S)-2-[(3-ethyl-[1,2,4]triazolo[4,3-b]pyridazin-6-yl)amino]-3-(1H-indol-3-yl)propan-1-ol, Bromodomain-containing protein 4, FORMIC ACID, ... | Authors: | Kim, J.H, Lee, B.I. | Deposit date: | 2022-07-28 | Release date: | 2023-01-18 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Crystal structure of [1,2,4]triazolo[4,3-b]pyridazine derivatives as BRD4 bromodomain inhibitors and structure-activity relationship study. Sci Rep, 13, 2023
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7YQ9
| Crystal structure of BRD4 bromodomain 1 (BD1) in complex with N-[2-(1H-indol-3-yl)ethyl]-3-(trifluoromethyl)[1,2,4]triazolo[4,3-b]pyridazin-6-amine | Descriptor: | Bromodomain-containing protein 4, CHLORIDE ION, FORMIC ACID, ... | Authors: | Kim, J.H, Lee, B.I. | Deposit date: | 2022-08-05 | Release date: | 2023-01-18 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Crystal structure of [1,2,4]triazolo[4,3-b]pyridazine derivatives as BRD4 bromodomain inhibitors and structure-activity relationship study. Sci Rep, 13, 2023
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8K2Y
| Crystal structure of MucD | Descriptor: | serine endoprotease DegP-like protein MucD | Authors: | Kim, J.H, Park, H.H. | Deposit date: | 2023-07-14 | Release date: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | The structure of MucD from Pseudomonas syringae revealed N-terminal loop-mediated trimerization of HtrA-like serine protease. Biochem.Biophys.Res.Commun., 688, 2023
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8I07
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8I08
| Crystal structure of Escherichia coli glyoxylate carboligase quadruple mutant | Descriptor: | 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ... | Authors: | Kim, J.H, Kim, J.S. | Deposit date: | 2023-01-10 | Release date: | 2023-11-22 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (1.91 Å) | Cite: | Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose. Int.J.Biol.Macromol., 253, 2023
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8I01
| Crystal structure of Escherichia coli glyoxylate carboligase | Descriptor: | 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ... | Authors: | Kim, J.H, Kim, J.S. | Deposit date: | 2023-01-10 | Release date: | 2023-11-22 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose. Int.J.Biol.Macromol., 253, 2023
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8I05
| Crystal structure of Escherichia coli glyoxylate carboligase double mutant | Descriptor: | 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, Glyoxylate carboligase, ... | Authors: | Kim, J.H, Kim, J.S. | Deposit date: | 2023-01-10 | Release date: | 2023-11-22 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.09 Å) | Cite: | Engineering of two thiamine diphosphate-dependent enzymes for the regioselective condensation of C1-formaldehyde into C4-erythrulose. Int.J.Biol.Macromol., 253, 2023
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6ICL
| Pseudomonas putida CBB5 NdmB | Descriptor: | FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N3-demethylase NdmB | Authors: | Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K. | Deposit date: | 2018-09-06 | Release date: | 2019-09-04 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex. J.Mol.Biol., 431, 2019
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1UC7
| Crystal structure of DsbDgamma | Descriptor: | Thiol:disulfide interchange protein dsbD | Authors: | Kim, J.H, Kim, S.J, Jeong, D.G, Son, J.H, Ryu, S.E. | Deposit date: | 2003-04-09 | Release date: | 2004-04-27 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of DsbDgamma reveals the mechanism of redox potential shift and substrate specificity(1) FEBS LETT., 543, 2003
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4E89
| Crystal Structure of RnaseH from gammaretrovirus | Descriptor: | CADMIUM ION, MAGNESIUM ION, RNase H | Authors: | Kim, J.H, Kim, S.J. | Deposit date: | 2012-03-19 | Release date: | 2012-10-17 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Crystal structure of xenotropic murine leukaemia virus-related virus (XMRV) ribonuclease H Biosci.Rep., 32, 2012
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4TQ1
| Crystal structure of human ATG5-TECAIR | Descriptor: | Autophagy protein 5, Tectonin beta-propeller repeat-containing protein 1 | Authors: | Kim, J.H, Hong, S.B, Song, H.K. | Deposit date: | 2014-06-10 | Release date: | 2015-03-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.802 Å) | Cite: | Insights into autophagosome maturation revealed by the structures of ATG5 with its interacting partners Autophagy, 11, 2015
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4TQ0
| Crystal structure of human ATG5-ATG16N69 | Descriptor: | Autophagy protein 5, Autophagy-related protein 16-1 | Authors: | Kim, J.H, Hong, S.B, Song, H.K. | Deposit date: | 2014-06-10 | Release date: | 2015-03-11 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.697 Å) | Cite: | Insights into autophagosome maturation revealed by the structures of ATG5 with its interacting partners Autophagy, 11, 2015
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5GS2
| Crystal structure of diabody complex with repebody and MBP | Descriptor: | Maltose-binding periplasmic protein, anti-MBP, anti-repebody, ... | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | Deposit date: | 2016-08-13 | Release date: | 2016-10-12 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (3.592 Å) | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface. Sci Rep, 6, 2016
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5GRY
| Crystal structure of disulfide-bonded diabody | Descriptor: | diabody | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | Deposit date: | 2016-08-12 | Release date: | 2016-10-12 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.639 Å) | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface. Sci Rep, 6, 2016
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5GS1
| Crystal structure of homo-specific diabody | Descriptor: | diabody, heavy chain, light chain | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | Deposit date: | 2016-08-13 | Release date: | 2016-10-12 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface. Sci Rep, 6, 2016
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5GS0
| Crystal structure of the complex of TLR3 and bi-specific diabody | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor 3, alpha-D-mannopyranose, ... | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | Deposit date: | 2016-08-13 | Release date: | 2016-10-12 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (3.275 Å) | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface. Sci Rep, 6, 2016
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5GRW
| Crystal structure of homo-specific diabody | Descriptor: | homo-specific diabody protein | Authors: | Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O. | Deposit date: | 2016-08-12 | Release date: | 2016-10-12 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface. Sci Rep, 6, 2016
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