Author results

1VDP
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THE CRYSTAL STRUCTURE OF THE MONOCLINIC FORM OF HEN EGG WHITE LYSOZYME AT 1.7 ANGSTROMS RESOLUTION IN SPACE
Descriptor:Lysozyme C
Authors:Aibara, S., Suzuki, A., Kidera, A., Shibata, K., Yamane, T., DeLucas, L.J., Hirose, M.
Deposit date:2004-03-24
Release date:2004-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of the monoclinic form of hen egg white lysozyme at 1.7 angstroms resolution in space
to be published
1VDQ
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THE CRYSTAL STRUCTURE OF THE ORTHORHOMBIC FORM OF HEN EGG WHITE LYSOZYME AT 1.5 ANGSTROMS RESOLUTION
Descriptor:Lysozyme C
Authors:Aibara, S., Suzuki, A., Kidera, A., Shibata, K., Yamane, T., DeLucas, L.J., Hirose, M.
Deposit date:2004-03-24
Release date:2004-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.5 angstroms resolution
to be published
1VDS
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THE CRYSTAL STRUCTURE OF THE TETRAGONAL FORM OF HEN EGG WHITE LYSOZYME AT 1.6 ANGSTROMS RESOLUTION IN SPACE
Descriptor:Lysozyme C
Authors:Aibara, S., Suzuki, A., Kidera, A., Shibata, K., Yamane, T., DeLucas, L.J., Hirose, M.
Deposit date:2004-03-24
Release date:2004-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of the tetragonal form of hen egg white lysozyme at 1.6 angstroms resolution in space
to be published
1VDT
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THE CRYSTAL STRUCTURE OF THE TETRAGONAL FORM OF HEN EGG WHITE LYSOZYME AT 1.7 ANGSTROMS RESOLUTION UNDER BASIC CONDITIONS IN SPACE
Descriptor:Lysozyme C
Authors:Aibara, S., Suzuki, A., Kidera, A., Shibata, K., Yamane, T., DeLucas, L.J., Hirose, M.
Deposit date:2004-03-24
Release date:2004-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of the tetragonal form of hen egg white lysozyme at 1.7 angstroms resolution under basic conditions in space
to be published
1VED
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THE CRYSTAL STRUCTURE OF THE ORTHORHOMBIC FORM OF HEN EGG WHITE LYSOZYME AT 1.9 ANGSTROMS RESOLUTION IN SPACE
Descriptor:Lysozyme C
Authors:Aibara, S., Suzuki, A., Kidera, A., Shibata, K., Yamane, T., DeLucas, L.J., Hirose, M.
Deposit date:2004-03-30
Release date:2004-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.9 angstroms resolution in space
To be Published
2AT9
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STRUCTURE OF BACTERIORHODOPSIN AT 3.0 ANGSTROM BY ELECTRON CRYSTALLOGRAPHY
Descriptor:BACTERIORHODOPSIN, RETINAL, 3-[[3-METHYLPHOSPHONO-GLYCEROLYL]PHOSPHONYL]-[1,2-DI[2,6,10,14-TETRAMETHYL-HEXADECAN-16-YL]GLYCEROL
Authors:Mitsuoka, K., Hirai, T., Murata, K., Miyazawa, A., Kidera, A., Kimura, Y., Fujiyoshi, Y.
Deposit date:1998-12-17
Release date:1999-04-27
Last modified:2011-07-13
Method:ELECTRON CRYSTALLOGRAPHY (3 Å)
Cite:The structure of bacteriorhodopsin at 3.0 A resolution based on electron crystallography: implication of the charge distribution.
J.Mol.Biol., 286, 1999
1AT9
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STRUCTURE OF BACTERIORHODOPSIN AT 3.0 ANGSTROM DETERMINED BY ELECTRON CRYSTALLOGRAPHY
Descriptor:BACTERIORHODOPSIN, RETINAL
Authors:Kimura, Y., Vassylyev, D.G., Miyazawa, A., Kidera, A., Matsushima, M., Mitsuoka, K., Murata, K., Hirai, T., Fujiyoshi, Y.
Deposit date:1997-08-20
Release date:1998-09-16
Last modified:2011-07-13
Method:ELECTRON CRYSTALLOGRAPHY (3 Å)
Cite:Surface of bacteriorhodopsin revealed by high-resolution electron crystallography.
Nature, 389, 1997
2ZQ3
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THE CRYSTAL STRUCTURE OF THE ORTHORHOMBIC FORM OF HEN EGG WHITE LYSOZYME AT 1.6 ANGSTROMS RESOLUTION
Descriptor:Lysozyme C, SODIUM ION
Authors:Aibara, S., Suzuki, A., Kidera, A., Shibata, K., Hirose, M.
Deposit date:2008-08-03
Release date:2008-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.5 angstroms resolution
To be Published
2ZQ4
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THE CRYSTAL STRUCTURE OF THE ORTHORHOMBIC FORM OF HEN EGG WHITE LYSOZYME AT 2.0 ANGSTROMS RESOLUTION
Descriptor:Lysozyme C
Authors:Aibara, S., Suzuki, A., Kidera, A., Shibata, K., Yamane, T., Hirose, M.
Deposit date:2008-08-03
Release date:2008-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.5 angstroms resolution
To be Published
1IWT
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CRYSTAL STRUCTURE ANALYSIS OF HUMAN LYSOZYME AT 113K.
Descriptor:LYSOZYME C, CHLORIDE ION
Authors:Joti, Y., Nakasako, M., Kidera, A., Go, N.
Deposit date:2002-06-03
Release date:2002-09-04
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Nonlinear temperature dependence of the crystal structure of lysozyme: correlation between coordinate shifts and thermal factors.
Acta Crystallogr.,Sect.D, 58, 2002
1IWU
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CRYSTAL STRUCTURE ANALYSIS OF HUMAN LYSOZYME AT 127K.
Descriptor:LYSOZYME C, CHLORIDE ION
Authors:Joti, Y., Nakasako, M., Kidera, A., Go, N.
Deposit date:2002-06-03
Release date:2002-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Nonlinear temperature dependence of the crystal structure of lysozyme: correlation between coordinate shifts and thermal factors.
Acta Crystallogr.,Sect.D, 58, 2002
1IWV
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CRYSTAL STRUCTURE ANALYSIS OF HUMAN LYSOZYME AT 147K.
Descriptor:LYSOZYME C, CHLORIDE ION
Authors:Joti, Y., Nakasako, M., Kidera, A., Go, N.
Deposit date:2002-06-03
Release date:2002-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Nonlinear temperature dependence of the crystal structure of lysozyme: correlation between coordinate shifts and thermal factors.
Acta Crystallogr.,Sect.D, 58, 2002
1IWW
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CRYSTAL STRUCTURE ANALYSIS OF HUMAN LYSOZYME AT 152K.
Descriptor:LYSOZYME C, CHLORIDE ION
Authors:Joti, Y., Nakasako, M., Kidera, A., Go, N.
Deposit date:2002-06-03
Release date:2002-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Nonlinear temperature dependence of the crystal structure of lysozyme: correlation between coordinate shifts and thermal factors.
Acta Crystallogr.,Sect.D, 58, 2002
1IWX
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CRYSTAL STRUCTURE ANALYSIS OF HUMAN LYSOZYME AT 161K.
Descriptor:LYSOZYME C, CHLORIDE ION
Authors:Joti, Y., Nakasako, M., Kidera, A., Go, N.
Deposit date:2002-06-03
Release date:2002-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Nonlinear temperature dependence of the crystal structure of lysozyme: correlation between coordinate shifts and thermal factors.
Acta Crystallogr.,Sect.D, 58, 2002
1IWY
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CRYSTAL STRUCTURE ANALYSIS OF HUMAN LYSOZYME AT 170K.
Descriptor:LYSOZYME C, CHLORIDE ION
Authors:Joti, Y., Nakasako, M., Kidera, A., Go, N.
Deposit date:2002-06-03
Release date:2002-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Nonlinear temperature dependence of the crystal structure of lysozyme: correlation between coordinate shifts and thermal factors.
Acta Crystallogr.,Sect.D, 58, 2002
1IWZ
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CRYSTAL STRUCTURE ANALYSIS OF HUMAN LYSOZYME AT 178K.
Descriptor:LYSOZYME C, CHLORIDE ION
Authors:Joti, Y., Nakasako, M., Kidera, A., Go, N.
Deposit date:2002-06-03
Release date:2002-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Nonlinear temperature dependence of the crystal structure of lysozyme: correlation between coordinate shifts and thermal factors.
Acta Crystallogr.,Sect.D, 58, 2002
2NOO
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CRYSTAL STRUCTURE OF MUTANT NIKA
Descriptor:Nickel-binding periplasmic protein, IODIDE ION, NICKEL (II) ION
Authors:Addy, C., Ohara, M., Kawai, F., Kidera, A., Ikeguchi, M., Fuchigami, S., Osawa, M., Shimada, I., Park, S.Y., Tame, J.R.H., Heddle, J.G.
Deposit date:2006-10-26
Release date:2007-01-23
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Nickel binding to NikA: an additional binding site reconciles spectroscopy, calorimetry and crystallography.
Acta Crystallogr.,Sect.D, 63, 2007
2Z33
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SOLUTION STRUCTURE OF THE DNA COMPLEX OF PHOB DNA-BINDING/TRANSACTIVATION DOMAIN
Descriptor:5'-D(*AP*CP*TP*GP*TP*CP*AP*TP*AP*AP*AP*TP*CP*TP*GP*T)-3', 5'-D(*AP*CP*AP*GP*AP*TP*TP*TP*AP*TP*GP*AP*CP*AP*GP*T)-3', Phosphate regulon transcriptional regulatory protein phoB
Authors:Yamane, T., Okamura, H., Ikeguchi, M., Nishimura, Y., Kidera, A.
Deposit date:2007-05-31
Release date:2008-04-22
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Water-mediated interactions between DNA and PhoB DNA-binding/transactivation domain: NMR-restrained molecular dynamics in explicit water environment.
Proteins, 71, 2008
2RVL
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SOLUTION STRUCTURE OF THE CHROMODOMAIN OF HP1ALPHA WITH THE N-TERMINAL TAIL
Descriptor:Chromobox protein homolog 5
Authors:Kawaguchi, A., Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
2RVM
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SOLUTION STRUCTURE OF THE CHROMODOMAIN OF HP1ALPHA WITH THE PHOSPHORYLATED N-TERMINAL TAIL
Descriptor:Chromobox protein homolog 5
Authors:Kawaguchi, A., Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
2RVN
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SOLUTION STRUCTURE OF THE CHROMODOMAIN OF HP1A WITH THE PHOSPHORYLATED N-TERMINAL TAIL COMPLEXED WITH H3K9ME3 PEPTIDE
Descriptor:Chromobox protein homolog 5, 18-mer peptide of Histone H3
Authors:Kawaguchi, A., Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
5WVO
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CRYSTAL STRUCTURE OF DNMT1 RFTS DOMAIN IN COMPLEX WITH K18/K23 MONO-UBIQUITYLATED HISTONE H3
Descriptor:Ubiquitin, DNA (cytosine-5)-methyltransferase 1, Histone H3.1, ...
Authors:Ishiyama, S., Nishiyama, A., Nakanishi, M., Arita, K.
Deposit date:2016-12-28
Release date:2017-11-15
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Structure of the Dnmt1 Reader Module Complexed with a Unique Two-Mono-Ubiquitin Mark on Histone H3 Reveals the Basis for DNA Methylation Maintenance
Mol. Cell, 68, 2017
6IF1
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CRYSTAL STRUCTURE OF UBE2K AND K48-LINKED DI-UBIQUITIN COMPLEX
Descriptor:Ubiquitin-conjugating enzyme E2 K, Ubiquitin
Authors:Lee, J.-G., Youn, H.-S., Lee, Y., An, J.Y., Park, K.R., Kang, J.Y., Lim, J.J., Eom, S.H.
Deposit date:2018-09-18
Release date:2018-11-21
Method:X-RAY DIFFRACTION (2.466 Å)
Cite:Crystal structure of the Ube2K/E2-25K and K48-linked di-ubiquitin complex provides structural insight into the mechanism of K48-specific ubiquitin chain synthesis.
Biochem. Biophys. Res. Commun., 506, 2018