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1V6Y
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BU of 1v6y by Molmil
Crystal Structure Of chimeric Xylanase between Streptomyces Olivaceoviridis E-86 FXYN and Cellulomonas fimi Cex
Descriptor: Beta-xylanase,Exoglucanase/xylanase
Authors:Kaneko, S, Ichinose, H, Fujimoto, Z, Kuno, A, Yura, K, Go, M, Mizuno, H, Kusakabe, I, Kobayashi, H.
Deposit date:2003-12-04
Release date:2004-09-07
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and function of a family 10 beta-xylanase chimera of Streptomyces olivaceoviridis E-86 FXYN and Cellulomonas fimi Cex
J.Biol.Chem., 279, 2004
8K9L
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BU of 8k9l by Molmil
Full agonist- and positive allosteric modulator-bound mu-type opioid receptor-G protein complex
Descriptor: (2~{S})-2-(3-bromanyl-4-methoxy-phenyl)-3-(4-chlorophenyl)sulfonyl-1,3-thiazolidine, DAMGO, G protein subunit alpha i3, ...
Authors:Hisano, T, Uchikubo-Kamo, T, Shirouzu, M, Imai, S, Kaneko, S, Shimada, I.
Deposit date:2023-08-01
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural and dynamic insights into the activation of the mu-opioid receptor by an allosteric modulator.
Nat Commun, 15, 2024
8K9K
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BU of 8k9k by Molmil
Full agonist-bound mu-type opioid receptor-G protein complex
Descriptor: DAMGO, G protein subunit alpha i3, Guanine nucleotide binding protein, ...
Authors:Hisano, T, Uchikubo-Kamo, T, Shirouzu, M, Imai, S, Kaneko, S, Shimada, I.
Deposit date:2023-08-01
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structural and dynamic insights into the activation of the mu-opioid receptor by an allosteric modulator.
Nat Commun, 15, 2024
2D1Z
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BU of 2d1z by Molmil
Crystal structure of catalytic-site mutant xylanase from Streptomyces olivaceoviridis E-86
Descriptor: ENDO-1,4-BETA-D-XYLANASE, GLYCEROL, SULFATE ION
Authors:Suzuki, R, Kuno, A, Fujimoto, Z, Ito, S, Kawahara, S.I, Kaneko, S, Hasegawa, T, Taira, K.
Deposit date:2005-09-02
Release date:2006-10-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic snapshots of an entire reaction cycle for a retaining xylanase from Streptomyces olivaceoviridis E-86
J.Biochem., 146, 2009
2D20
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BU of 2d20 by Molmil
Crystal structure of michaelis complex of catalytic-site mutant xylanase from Streptomyces olivaceoviridis E-86
Descriptor: ENDO-1,4-BETA-D-XYLANASE, GLYCEROL, P-NITROPHENOL, ...
Authors:Suzuki, R, Kuno, A, Fujimoto, Z, Ito, S, Kawahara, S.I, Kaneko, S, Hasegawa, T, Taira, K.
Deposit date:2005-09-02
Release date:2006-10-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystallographic snapshots of an entire reaction cycle for a retaining xylanase from Streptomyces olivaceoviridis E-86
J.Biochem., 146, 2009
2D23
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BU of 2d23 by Molmil
Crystal structure of EP complex of catalytic-site mutant xylanase from Streptomyces olivaceoviridis E-86
Descriptor: AZIDE ION, ENDO-1,4-BETA-D-XYLANASE, GLYCEROL, ...
Authors:Suzuki, R, Kuno, A, Fujimoto, Z, Ito, S, Kawahara, S.I, Kaneko, S, Hasegawa, T, Taira, K.
Deposit date:2005-09-02
Release date:2006-10-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystallographic snapshots of an entire reaction cycle for a retaining xylanase from Streptomyces olivaceoviridis E-86
J.Biochem., 146, 2009
2D24
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BU of 2d24 by Molmil
Crystal structure of ES complex of catalytic-site mutant xylanase from Streptomyces olivaceoviridis E-86
Descriptor: ENDO-1,4-BETA-D-XYLANASE, GLYCEROL, SULFATE ION, ...
Authors:Suzuki, R, Kuno, A, Fujimoto, Z, Ito, S, Kawahara, S.I, Kaneko, S, Hasegawa, T, Taira, K.
Deposit date:2005-09-02
Release date:2006-10-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystallographic snapshots of an entire reaction cycle for a retaining xylanase from Streptomyces olivaceoviridis E-86
J.Biochem., 146, 2009
2D22
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BU of 2d22 by Molmil
Crystal structure of covalent glycosyl-enzyme intermediate of catalytic-site mutant xylanase from Streptomyces olivaceoviridis E-86
Descriptor: ENDO-1,4-BETA-D-XYLANASE, GLYCEROL, SULFATE ION, ...
Authors:Suzuki, R, Kuno, A, Fujimoto, Z, Ito, S, Kawahara, S.I, Kaneko, S, Hasegawa, T, Taira, K.
Deposit date:2005-09-02
Release date:2006-10-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic snapshots of an entire reaction cycle for a retaining xylanase from Streptomyces olivaceoviridis E-86
J.Biochem., 146, 2009
2XOM
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BU of 2xom by Molmil
Atomic resolution structure of TmCBM61 in complex with beta-1,4- galactotriose
Descriptor: ARABINOGALACTAN ENDO-1,4-BETA-GALACTOSIDASE, CALCIUM ION, beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose
Authors:Cid, M, Lodberg-Pedersen, H, Kaneko, S, Coutinho, P.M, Henrissat, B, Willats, W.G.T, Boraston, A.B.
Deposit date:2010-08-20
Release date:2010-09-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Recognition of the Helical Structure of Beta-1,4-Galactan by a New Family of Carbohydrate-Binding Modules.
J.Biol.Chem., 285, 2010
2XON
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BU of 2xon by Molmil
Structure of TmCBM61 in complex with beta-1,4-galactotriose at 1.4 A resolution
Descriptor: 1,2-ETHANEDIOL, ARABINOGALACTAN ENDO-1,4-BETA-GALACTOSIDASE, CALCIUM ION, ...
Authors:Cid, M, Lodberg-Pedersen, H, Kaneko, S, Coutinho, P.M, Henrissat, B, Willats, W.G.T, Boraston, A.B.
Deposit date:2010-08-20
Release date:2010-09-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Recognition of the Helical Structure of Beta-1,4-Galactan by a New Family of Carbohydrate-Binding Modules.
J.Biol.Chem., 285, 2010
2G4F
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BU of 2g4f by Molmil
Structure of S.olivaceoviridis xylanase Q88A/R275A mutant
Descriptor: Hydrolase
Authors:Diertavitian, S, Kaneko, S, Fujimoto, Z, Kuno, A, Johansson, E, Lo Leggio, L.
Deposit date:2006-02-22
Release date:2007-03-06
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure-based engineering of glucose specificity in a family 10 xylanase from Streptomyces olivaceoviridis E-86
PROCESS BIOCHEM, 47, 2012
1IT0
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BU of 1it0 by Molmil
Crystal structure of xylanase from Streptomyces olivaceoviridis E-86 complexed with lactose
Descriptor: beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, endo-1,4-beta-D-xylanase
Authors:Fujimoto, Z, Kuno, A, Kaneko, S, Kobayashi, H, Kusakabe, I, Mizuno, H.
Deposit date:2001-12-27
Release date:2002-02-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the sugar complexes of Streptomyces olivaceoviridis E-86 xylanase: sugar binding structure of the family 13 carbohydrate binding module.
J.Mol.Biol., 316, 2002
1ISW
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BU of 1isw by Molmil
Crystal structure of xylanase from Streptomyces olivaceoviridis E-86 complexed with xylobiose
Descriptor: beta-D-xylopyranose, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, endo-1,4-beta-D-xylanase
Authors:Fujimoto, Z, Kuno, A, Kaneko, S, Kobayashi, H, Kusakabe, I, Mizuno, H.
Deposit date:2001-12-27
Release date:2002-02-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the sugar complexes of Streptomyces olivaceoviridis E-86 xylanase: sugar binding structure of the family 13 carbohydrate binding module.
J.Mol.Biol., 316, 2002
1ISV
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BU of 1isv by Molmil
Crystal structure of xylanase from Streptomyces olivaceoviridis E-86 complexed with xylose
Descriptor: beta-D-xylopyranose, endo-1,4-beta-D-xylanase
Authors:Fujimoto, Z, Kuno, A, Kaneko, S, Kobayashi, H, Kusakabe, I, Mizuno, H.
Deposit date:2001-12-27
Release date:2002-02-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the sugar complexes of Streptomyces olivaceoviridis E-86 xylanase: sugar binding structure of the family 13 carbohydrate binding module.
J.Mol.Biol., 316, 2002
1ISX
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BU of 1isx by Molmil
Crystal structure of xylanase from Streptomyces olivaceoviridis E-86 complexed with xylotriose
Descriptor: beta-D-xylopyranose, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ...
Authors:Fujimoto, Z, Kuno, A, Kaneko, S, Kobayashi, H, Kusakabe, I, Mizuno, H.
Deposit date:2001-12-27
Release date:2002-02-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the sugar complexes of Streptomyces olivaceoviridis E-86 xylanase: sugar binding structure of the family 13 carbohydrate binding module.
J.Mol.Biol., 316, 2002
1ISY
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BU of 1isy by Molmil
Crystal structure of xylanase from Streptomyces olivaceoviridis E-86 complexed with glucose
Descriptor: beta-D-glucopyranose, endo-1,4-beta-D-xylanase
Authors:Fujimoto, Z, Kuno, A, Kaneko, S, Kobayashi, H, Kusakabe, I, Mizuno, H.
Deposit date:2001-12-27
Release date:2002-02-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the sugar complexes of Streptomyces olivaceoviridis E-86 xylanase: sugar binding structure of the family 13 carbohydrate binding module.
J.Mol.Biol., 316, 2002
1ISZ
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BU of 1isz by Molmil
Crystal structure of xylanase from Streptomyces olivaceoviridis E-86 complexed with galactose
Descriptor: beta-D-galactopyranose, endo-1,4-beta-D-xylanase
Authors:Fujimoto, Z, Kuno, A, Kaneko, S, Kobayashi, H, Kusakabe, I, Mizuno, H.
Deposit date:2001-12-27
Release date:2002-02-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the sugar complexes of Streptomyces olivaceoviridis E-86 xylanase: sugar binding structure of the family 13 carbohydrate binding module.
J.Mol.Biol., 316, 2002
1UAS
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BU of 1uas by Molmil
Crystal structure of rice alpha-galactosidase
Descriptor: GLYCEROL, PLATINUM (II) ION, SULFATE ION, ...
Authors:Fujimoto, Z, Kaneko, S, Momma, M, Kobayashi, H, Mizuno, H.
Deposit date:2003-03-18
Release date:2003-07-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of rice alpha-galactosidase complexed with D-galactose
J.Biol.Chem., 278, 2003
5GQD
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BU of 5gqd by Molmil
Crystal structure of covalent glycosyl-enzyme intermediate of xylanase mutant (T82A, N127S, and E128H) from Streptomyces olivaceoviridis E-86
Descriptor: Beta-xylanase, GLYCEROL, beta-D-xylopyranose-(1-4)-alpha-D-xylopyranose
Authors:Suzuki, R, Fujimoto, Z, Kaneko, S, Kuno, A.
Deposit date:2016-08-07
Release date:2017-08-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Azidolysis by the Formation of Stable Ser-His Catalytic Dyad in a Glycoside Hydrolase Family 10 Xylanase Mutant
J.Appl.Glyosci., 65, 2019
5GQE
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BU of 5gqe by Molmil
Crystal structure of michaelis complex of xylanase mutant (T82A, N127S, and E128H) from Streptomyces olivaceoviridis E-86
Descriptor: Beta-xylanase, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ...
Authors:Suzuki, R, Fujimoto, Z, Kaneko, S, Kuno, A.
Deposit date:2016-08-07
Release date:2017-08-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Azidolysis by the Formation of Stable Ser-His Catalytic Dyad in a Glycoside Hydrolase Family 10 Xylanase Mutant
J.Appl.Glyosci., 65, 2019
2G3J
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BU of 2g3j by Molmil
Structure of S.olivaceoviridis xylanase Q88A/R275A mutant
Descriptor: PHOSPHATE ION, Xylanase, alpha-D-xylopyranose-(1-4)-alpha-D-xylopyranose
Authors:Diertavitian, S, Kaneko, S, Fujimoto, Z, Kuno, A, Johansson, E, Lo Leggio, L.
Deposit date:2006-02-20
Release date:2007-03-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-based engineering of glucose specificity in a family 10 xylanase from Streptomyces olivaceoviridis E-86
PROCESS BIOCHEM, 47, 2012
2G3I
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BU of 2g3i by Molmil
Structure of S.olivaceoviridis xylanase Q88A/R275A mutant
Descriptor: PHOSPHATE ION, Xylanase
Authors:Diertavitian, S, Kaneko, S, Fujimoto, Z, Kuno, A, Johansson, E, Lo Leggio, L.
Deposit date:2006-02-20
Release date:2007-03-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based engineering of glucose specificity in a family 10 xylanase from Streptomyces olivaceoviridis E-86
PROCESS BIOCHEM, 47, 2012
1WKR
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BU of 1wkr by Molmil
Crystal structure of aspartic proteinase from Irpex lacteus
Descriptor: Polyporopepsin, SULFATE ION, pepstatin
Authors:Fujimoto, Z, Fujii, Y, Kaneko, S, Kobayashi, H, Mizuno, H.
Deposit date:2004-06-02
Release date:2004-09-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of Aspartic Proteinase from Irpex lacteus in Complex with Inhibitor Pepstatin
J.Mol.Biol., 341, 2004
3A5V
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BU of 3a5v by Molmil
Crystal structure of alpha-galactosidase I from Mortierella vinacea
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Fujimoto, Z, Kaneko, S, Kobayashi, H.
Deposit date:2009-08-12
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Tetramer Structure of the Glycoside Hydrolase Family 27 alpha-Galactosidase I from Umbelopsis vinacea
Biosci.Biotechnol.Biochem., 73, 2009
3AKI
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BU of 3aki by Molmil
Crystal structure of exo-1,5-alpha-L-arabinofuranosidase complexed with alpha-L-arabinofuranosyl azido
Descriptor: (2R,3R,4R,5S)-2-azido-5-(hydroxymethyl)oxolane-3,4-diol, CHLORIDE ION, GLYCEROL, ...
Authors:Fujimoto, Z, Ichinose, H, Kaneko, S.
Deposit date:2010-07-14
Release date:2010-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of an Exo-1,5-{alpha}-L-arabinofuranosidase from Streptomyces avermitilis Provides Insights into the Mechanism of Substrate Discrimination between Exo- and Endo-type Enzymes in Glycoside Hydrolase Family 43.
J.Biol.Chem., 285, 2010

 

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