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5V93
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CRYO-EM STRUCTURE OF THE 70S RIBOSOME FROM MYCOBACTERIUM TUBERCULOSIS BOUND WITH CAPREOMYCIN
Descriptor:50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, ...
Authors:Yang, K., Chang, J.-Y., Cui, Z., Li, X., Meng, R., Duan, L., Thongchol, J., Jakana, J., Huwe, C., Sacchettini, J., Zhang, J.
Deposit date:2017-03-22
Release date:2017-09-20
Last modified:2017-11-01
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural insights into species-specific features of the ribosome from the human pathogen Mycobacterium tuberculosis.
Nucleic Acids Res., 45, 2017
3IYF
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ATOMIC MODEL OF THE LIDLESS MM-CPN IN THE OPEN STATE
Descriptor:Chaperonin
Authors:Zhang, J., Baker, M.L., Schroeder, G., Douglas, N.R., Reissmann, S., Jakana, J., Dougherty, M., Fu, C.J., Levitt, M., Ludtke, S.J., Frydman, J., Chiu, W.
Deposit date:2009-10-23
Release date:2010-02-02
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Mechanism of folding chamber closure in a group II chaperonin
Nature, 463, 2010
3IZH
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MM-CPN D386A WITH ATP
Descriptor:Chaperonin
Authors:Douglas, N.R., Reissmann, S., Zhang, J., Chen, B., Jakana, J., Kumar, R., Chiu, W., Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZI
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MM-CPN RLS WITH ATP
Descriptor:Chaperonin
Authors:Douglas, N.R., Reissmann, S., Zhang, J., Chen, B., Jakana, J., Kumar, R., Chiu, W., Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZJ
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MM-CPN RLS WITH ATP AND ALFX
Descriptor:Chaperonin
Authors:Douglas, N.R., Reissmann, S., Zhang, J., Chen, B., Jakana, J., Kumar, R., Chiu, W., Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZK
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MM-CPN RLS DELTALID WITH ATP
Descriptor:Chaperonin
Authors:Douglas, N.R., Reissmann, S., Zhang, J., Chen, B., Jakana, J., Kumar, R., Chiu, W., Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZL
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MM-CPN RLS DELTALID WITH ATP AND ALFX
Descriptor:Mm-cpn rls deltalid
Authors:Douglas, N.R., Reissmann, S., Zhang, J., Chen, B., Jakana, J., Kumar, R., Chiu, W., Frydman, J.
Deposit date:2010-10-29
Release date:2011-02-02
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZM
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MM-CPN WILDTYPE WITH ATP
Descriptor:Chaperonin
Authors:Douglas, N.R., Reissmann, S., Zhang, J., Chen, B., Jakana, J., Kumar, R., Chiu, W., Frydman, J.
Deposit date:2010-10-30
Release date:2011-02-02
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZN
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MM-CPN DELTALID WITH ATP
Descriptor:Chaperonin
Authors:Douglas, N.R., Reissmann, S., Zhang, J., Chen, B., Jakana, J., Kumar, R., Chiu, W., Frydman, J.
Deposit date:2010-10-30
Release date:2011-02-02
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3LOS
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ATOMIC MODEL OF MM-CPN IN THE CLOSED STATE
Descriptor:Chaperonin
Authors:Zhang, J., Baker, M.L., Schroeder, G., Douglas, N.R., Reissmann, S., Jakana, J., Dougherty, M., Fu, C.J., Levitt, M., Ludtke, S.J., Frydman, J., Chiu, W.
Deposit date:2010-02-04
Release date:2010-03-16
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Mechanism of folding chamber closure in a group II chaperonin
Nature, 463, 2010
4A0O
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SYMMETRY-FREE CRYO-EM MAP OF TRIC IN THE NUCLEOTIDE-FREE (APO) STATE
Descriptor:T-COMPLEX PROTEIN 1 SUBUNIT BETA
Authors:Cong, Y., Schroder, G.F., Meyer, A.S., Jakana, J., Ma, B., Dougherty, M.T., Schmid, M.F., Reissmann, S., Levitt, M., Ludtke, S.L., Frydman, J., Chiu, W.
Deposit date:2011-09-10
Release date:2012-02-15
Last modified:2017-04-19
Method:ELECTRON MICROSCOPY (10.5 Å)
Cite:Symmetry-Free Cryo-Em Structures of the Chaperonin Tric Along its ATPase-Driven Conformational Cycle.
Embo J., 31, 2012
4A0V
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MODEL REFINED AGAINST THE SYMMETRY-FREE CRYO-EM MAP OF TRIC-AMP-PNP
Descriptor:T-COMPLEX PROTEIN 1 SUBUNIT BETA
Authors:Cong, Y., Schroder, G.F., Meyer, A.S., Jakana, J., Ma, B., Dougherty, M.T., Schmid, M.F., Reissmann, S., Levitt, M., Ludtke, S.L., Frydman, J., Chiu, W.
Deposit date:2011-09-13
Release date:2012-02-15
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (10.7 Å)
Cite:Symmetry-Free Cryo-Em Structures of the Chaperonin Tric Along its ATPase-Driven Conformational Cycle.
Embo J., 31, 2012
4A0W
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MODEL BUILT AGAINST SYMMETRY-FREE CRYO-EM MAP OF TRIC-ADP-ALFX
Descriptor:T-COMPLEX PROTEIN 1 SUBUNIT BETA
Authors:Cong, Y., Schroder, G.F., Meyer, A.S., Jakana, J., Ma, B., Dougherty, M.T., Schmid, M.F., Reissmann, S., Levitt, M., Ludtke, S.L., Frydman, J., Chiu, W.
Deposit date:2011-09-13
Release date:2012-02-15
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (13.9 Å)
Cite:Symmetry-Free Cryo-Em Structures of the Chaperonin Tric Along its ATPase-Driven Conformational Cycle.
Embo J., 31, 2012
4A13
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MODEL REFINED AGAINST SYMMETRY-FREE CRYO-EM MAP OF TRIC-ADP
Descriptor:T-COMPLEX PROTEIN 1 SUBUNIT BETA
Authors:Cong, Y., Schroder, G.F., Meyer, A.S., Jakana, J., Ma, B., Dougherty, M.T., Schmid, M.F., Reissmann, S., Levitt, M., Ludtke, S.L., Frydman, J., Chiu, W.
Deposit date:2011-09-13
Release date:2012-02-15
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (11.3 Å)
Cite:Symmetry-Free Cryo-Em Structures of the Chaperonin Tric Along its ATPase-Driven Conformational Cycle.
Embo J., 31, 2012
6OJN
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COMPARATIVE MODEL OF SGIV MAJOR COAT PROTEIN (MCP) TRIMER BASED ON CRYO-EM MAP
Descriptor:Major capsid protein
Authors:Pintilie, G., Chen, D.-H., Tran, B.N., Jakana, J., Wu, J., Hew, C.L., Chiu, W.
Deposit date:2019-04-11
Release date:2019-06-12
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Segmentation and Comparative Modeling in a 8.6 Angstrom Cryo-EM Map of the 220 nm Diameter Singapore Grouper Iridovirus
To be Published
2XYY
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DE NOVO MODEL OF BACTERIOPHAGE P22 PROCAPSID COAT PROTEIN
Descriptor:COAT PROTEIN
Authors:Chen, D.-H., Baker, M.L., Hryc, C.F., DiMaio, F., Jakana, J., Wu, W., Dougherty, M., Haase-Pettingell, C., Schmid, M.F., Jiang, W., Baker, D., King, J.A., Chiu, W.
Deposit date:2010-11-19
Release date:2011-02-02
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural Basis for Scaffolding-Mediated Assembly and Maturation of a DsDNA Virus.
Proc.Natl.Acad.Sci.USA, 108, 2011
2XYZ
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DE NOVO MODEL OF BACTERIOPHAGE P22 VIRION COAT PROTEIN
Descriptor:COAT PROTEIN
Authors:Chen, D.-H., Baker, M.L., Hryc, C.F., DiMaio, F., Jakana, J., Wu, W., Dougherty, M., Haase-Pettingell, C., Schmid, M.F., Jiang, W., Baker, D., King, J.A., Chiu, W.
Deposit date:2010-11-19
Release date:2011-02-02
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural Basis for Scaffolding-Mediated Assembly and Maturation of a DsDNA Virus.
Proc.Natl.Acad.Sci.USA, 108, 2011
2YEW
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MODELING BARMAH FOREST VIRUS STRUCTURAL PROTEINS
Descriptor:CAPSID PROTEIN, E1 ENVELOPE GLYCOPROTEIN, E2 ENVELOPE GLYCOPROTEIN
Authors:Kostyuchenko, V.A., Jakana, J., Liu, X., Haddow, A.D., Aung, M., Weaver, S.C., Chiu, W., Lok, S.M.
Deposit date:2011-03-31
Release date:2012-04-18
Last modified:2017-08-23
Method:ELECTRON MICROSCOPY (5 Å)
Cite:The Structure of Barmah Forest Virus as Revealed by Cryo-Electron Microscopy at a 6-Angstrom Resolution Has Detailed Transmembrane Protein Architecture and Interactions.
J.Virol., 85, 2011
3J0C
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MODELS OF E1, E2 AND CP OF VENEZUELAN EQUINE ENCEPHALITIS VIRUS TC-83 STRAIN RESTRAINED BY A NEAR ATOMIC RESOLUTION CRYO-EM MAP
Descriptor:E1 envelope glycoprotein, E2 envelope glycoprotein, Capsid protein
Authors:Zhang, R., Hryc, C.F., Cong, Y., Liu, X., Jakana, J., Gorchakov, R., Baker, M.L., Weaver, S.C., Chiu, W.
Deposit date:2011-06-22
Release date:2011-08-24
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:4.4 A cryo-EM structure of an enveloped alphavirus Venezuelan equine encephalitis virus.
Embo J., 30, 2011
3J40
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VALIDATED NEAR-ATOMIC RESOLUTION STRUCTURE OF BACTERIOPHAGE EPSILON15 DERIVED FROM CRYO-EM AND MODELING
Descriptor:gp10, gp7
Authors:Baker, M.L., Hryc, C.F., Zhang, Q., Wu, W., Jakana, J., Haase-Pettingell, C., Afonine, P.V., Adams, P.D., King, J.A., Jiang, W., Chiu, W.
Deposit date:2013-05-30
Release date:2013-07-10
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling.
Proc.Natl.Acad.Sci.USA, 110, 2013
3J7L
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FULL VIRUS MAP OF BROME MOSAIC VIRUS
Descriptor:Capsid protein
Authors:Wang, Z., Hryc, C., Bammes, B., Afonine, P.V., Jakana, J., Chen, D.H., Liu, X., Baker, M.L., Kao, C., Ludtke, S.J., Schmid, M.F., Adams, P.D., Chiu, W.
Deposit date:2014-07-18
Release date:2014-09-10
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3J7M
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VIRUS MODEL OF BROME MOSAIC VIRUS (FIRST HALF DATA SET)
Descriptor:Capsid protein
Authors:Wang, Z., Hryc, C., Bammes, B., Afonine, P.V., Jakana, J., Chen, D.H., Liu, X., Baker, M.L., Kao, C., Ludtke, S.J., Schmid, M.F., Adams, P.D., Chiu, W.
Deposit date:2014-07-18
Release date:2014-09-10
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3J7N
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VIRUS MODEL OF BROME MOSAIC VIRUS (SECOND HALF DATA SET)
Descriptor:Capsid protein
Authors:Wang, Z., Hryc, C., Bammes, B., Afonine, P.V., Jakana, J., Chen, D.H., Liu, X., Baker, M.L., Kao, C., Ludtke, S.J., Schmid, M.F., Adams, P.D., Chiu, W.
Deposit date:2014-07-18
Release date:2014-09-10
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
5UU5
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BACTERIOPHAGE P22 MATURE VIRION CAPSID PROTEIN
Descriptor:Major capsid protein
Authors:Hryc, C.F., Chen, D.-H., Afonine, P.V., Jakana, J., Wang, Z., Haase-Pettingell, C., Jiang, W., Adams, P.D., King, J.A., Schmid, M.F., Chiu, W.
Deposit date:2017-02-16
Release date:2017-03-15
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Accurate model annotation of a near-atomic resolution cryo-EM map.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3KTT
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ATOMIC MODEL OF BOVINE TRIC CCT2(BETA) SUBUNIT DERIVED FROM A 4.0 ANGSTROM CRYO-EM MAP
Descriptor:T-complex protein 1 subunit beta
Authors:Cong, Y., Baker, M.L., Ludtke, S.J., Frydman, J., Chiu, W.
Deposit date:2009-11-25
Release date:2010-03-16
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement.
Proc.Natl.Acad.Sci.USA, 107, 2010
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