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1IQP
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CRYSTAL STRUCTURE OF THE CLAMP LOADER SMALL SUBUNIT FROM PYROCOCCUS FURIOSUS
Descriptor:RFCS, ADENOSINE-5'-DIPHOSPHATE
Authors:Oyama, T., Ishino, Y., Cann, I.K.O., Ishino, S., Morikawa, K.
Deposit date:2001-07-24
Release date:2001-09-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Atomic Structure of the Clamp Loader Small Subunit from Pyrococcus furiosus
Mol.Cell, 8, 2001
1ISQ
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PYROCOCCUS FURIOSUS PCNA COMPLEXED WITH RFCL PIP-BOX PEPTIDE
Descriptor:Proliferating Cell Nuclear Antigen, replication factor C large subunit
Authors:Matsumiya, S., Ishino, S., Ishino, Y., Morikawa, K.
Deposit date:2001-12-19
Release date:2002-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Physical interaction between proliferating cell nuclear antigen and replication factor C from Pyrococcus furiosus
Genes Cells, 7, 2002
1IZ4
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PYROCOCCUS FURIOSUS PCNA MUTANT (MET73LEU/ASP143ALA): TETRAGONAL FORM
Descriptor:Proliferating cell nuclear antigen
Authors:Matsumiya, S., Ishino, S., Ishino, Y., Morikawa, K.
Deposit date:2002-09-21
Release date:2003-04-01
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Intermolecular ion pairs maintain the toroidal structure of Pyrococcus furiosus PCNA
PROTEIN SCI., 12, 2003
1IZ5
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PYROCOCCUS FURIOSUS PCNA MUTANT (MET73LEU, ASP143ALA, ASP147ALA): ORTHORHOMBIC FORM
Descriptor:Proliferating cell nuclear antigen
Authors:Matsumiya, S., Ishino, S., Ishino, Y., Morikawa, K.
Deposit date:2002-09-23
Release date:2003-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Intermolecular ion pairs maintain the toroidal structure of Pyrococcus furiosus PCNA
PROTEIN SCI., 12, 2003
5GKE
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STRUCTURE OF ENDOMS-DSDNA1 COMPLEX
Descriptor:Endonuclease EndoMS, DNA (5'-D(*CP*GP*CP*TP*AP*CP*AP*TP*GP*TP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*GP*AP*CP*GP*TP*GP*TP*AP*GP*CP*G)-3'), ...
Authors:Nakae, S., Hijikata, A., Tsuji, T., Yonezawa, K., Kouyama, K., Mayanagi, K., Ishino, S., Ishino, Y., Shirai, T.
Deposit date:2016-07-04
Release date:2016-11-02
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the EndoMS-DNA Complex as Mismatch Restriction Endonuclease
Structure, 24, 2016
5GKF
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STRUCTURE OF ENDOMS-DSDNA1' COMPLEX
Descriptor:Endonuclease EndoMS, DNA (5'-D(*CP*GP*CP*TP*AP*CP*AP*TP*GP*TP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*GP*AP*CP*TP*TP*GP*TP*AP*GP*CP*G)-3'), ...
Authors:Nakae, S., Hijikata, A., Tsuji, T., Yonezawa, K., Kouyama, K., Mayanagi, K., Ishino, S., Ishino, Y., Shirai, T.
Deposit date:2016-07-04
Release date:2016-11-02
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the EndoMS-DNA Complex as Mismatch Restriction Endonuclease
Structure, 24, 2016
5GKG
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STRUCTURE OF ENDOMS-DSDNA1'' COMPLEX
Descriptor:Endonuclease EndoMS, DNA (5'-D(*CP*GP*CP*TP*AP*CP*AP*GP*GP*TP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*GP*AP*CP*GP*TP*GP*TP*AP*GP*CP*G)-3'), ...
Authors:Nakae, S., Hijikata, A., Tsuji, T., Yonezawa, K., Kouyama, K., Mayanagi, K., Ishino, S., Ishino, Y., Shirai, T.
Deposit date:2016-07-04
Release date:2016-11-02
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the EndoMS-DNA Complex as Mismatch Restriction Endonuclease
Structure, 24, 2016
5GKH
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STRUCTURE OF ENDOMS-DSDNA2 COMPLEX
Descriptor:Endonuclease EndoMS, DNA (5'-D(*CP*GP*TP*GP*CP*CP*AP*GP*GP*TP*GP*CP*CP*GP*T)-3'), DNA (5'-D(*AP*CP*GP*GP*CP*AP*CP*TP*TP*GP*GP*CP*AP*CP*G)-3'), ...
Authors:Nakae, S., Hijikata, A., Tsuji, T., Yonezawa, K., Kouyama, K., Mayanagi, K., Ishino, S., Ishino, Y., Shirai, T.
Deposit date:2016-07-04
Release date:2016-11-02
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the EndoMS-DNA Complex as Mismatch Restriction Endonuclease
Structure, 24, 2016
5GKI
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STRUCTURE OF ENDOMS-DSDNA3 COMPLEX
Descriptor:Endonuclease EndoMS, DNA (5'-D(*GP*CP*CP*TP*AP*GP*GP*TP*CP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*GP*GP*GP*GP*CP*CP*TP*AP*GP*GP*C)-3'), ...
Authors:Nakae, S., Hijikata, A., Tsuji, T., Yonezawa, K., Kouyama, K., Mayanagi, K., Ishino, S., Ishino, Y., Shirai, T.
Deposit date:2016-07-04
Release date:2016-11-02
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the EndoMS-DNA Complex as Mismatch Restriction Endonuclease
Structure, 24, 2016
5GKJ
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STRUCTURE OF ENDOMS IN APO FORM
Descriptor:Endonuclease EndoMS
Authors:Nakae, S., Hijikata, A., Tsuji, T., Yonezawa, K., Kouyama, K., Mayanagi, K., Ishino, S., Ishino, Y., Shirai, T.
Deposit date:2016-07-04
Release date:2016-11-02
Last modified:2016-11-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of the EndoMS-DNA Complex as Mismatch Restriction Endonuclease
Structure, 24, 2016
3ANW
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A PROTEIN COMPLEX ESSENTIAL INITIATION OF DNA REPLICATION
Descriptor:Putative uncharacterized protein
Authors:Oyama, T., Shirai, T., Nagasawa, N., Ishino, Y., Morikawa, K.
Deposit date:2010-09-10
Release date:2011-07-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Architectures of archaeal GINS complexes, essential DNA replication initiation factors
Bmc Biol., 9, 2011
3A2F
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CRYSTAL STRUCTURE OF PYROCOCCUS FURIOSUS DNA POLYMERASE/PCNA MONOMER MUTANT COMPLEX
Descriptor:DNA polymerase, DNA polymerase sliding clamp
Authors:Nishida, H., Ishino, Y., Morikawa, K.
Deposit date:2009-05-15
Release date:2009-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Structural determinant for switching between the polymerase and exonuclease modes in the PCNA-replicative DNA polymerase complex
To be Published
1DQ3
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CRYSTAL STRUCTURE OF AN ARCHAEAL INTEIN-ENCODED HOMING ENDONUCLEASE PI-PFUI
Descriptor:ENDONUCLEASE, ZINC ION
Authors:Ichiyanagi, K., Ishino, Y., Morikawa, K.
Deposit date:1999-12-30
Release date:2000-07-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of an archaeal intein-encoded homing endonuclease PI-PfuI.
J.Mol.Biol., 300, 2000
1GE8
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PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA) HOMOLOG FROM PYROCOCCUS FURIOSUS
Descriptor:PROLIFERATION CELL NUCLEAR ANTIGEN
Authors:Matsumiya, S., Ishino, Y., Morikawa, K.
Deposit date:2000-10-18
Release date:2001-01-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of an archaeal DNA sliding clamp: proliferating cell nuclear antigen from Pyrococcus furiosus.
Protein Sci., 10, 2001
1GEF
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CRYSTAL STRUCTURE OF THE ARCHAEAL HOLLIDAY JUNCTION RESOLVASE HJC
Descriptor:HOLLIDAY JUNCTION RESOLVASE, SULFATE ION
Authors:Nishino, T., Komori, K., Tsuchiya, D., Ishino, Y., Morikawa, K.
Deposit date:2000-11-08
Release date:2001-03-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the archaeal holliday junction resolvase Hjc and implications for DNA recognition.
Structure, 9, 2001
1IPI
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CRYSTAL STRUCTURE OF THE ARCHAEAL HOLLIDAY JUNCTION RESOLVASE HJC FROM PYROCOCCUS FURIOSUS FORM II
Descriptor:HOLLIDAY JUNCTION RESOLVASE
Authors:Nishino, T., Komori, K., Ishino, Y., Morikawa, K.
Deposit date:2001-05-15
Release date:2001-11-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Dissection of the regional roles of the archaeal Holliday junction resolvase Hjc by structural and mutational analyses.
J.Biol.Chem., 276, 2001
1J22
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CRYSTAL STRUCTURE OF ARCHAEAL XPF/MUS81 HOMOLOG, HEF FROM PYROCOCCUS FURIOSUS, NUCLEASE DOMAIN, SELENOMET DERIVATIVE
Descriptor:ATP-dependent RNA helicase, putative
Authors:Nishino, T., Komori, K., Ishino, Y., Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1J23
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CRYSTAL STRUCTURE OF ARCHAEAL XPF/MUS81 HOMOLOG, HEF FROM PYROCOCCUS FURIOSUS, NUCLEASE DOMAIN
Descriptor:ATP-dependent RNA helicase, putative
Authors:Nishino, T., Komori, K., Ishino, Y., Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1J24
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CRYSTAL STRUCTURE OF ARCHAEAL XPF/MUS81 HOMOLOG, HEF FROM PYROCOCCUS FURIOSUS, NUCLEASE DOMAIN, CA COCRYSTAL
Descriptor:ATP-dependent RNA helicase, putative, CALCIUM ION
Authors:Nishino, T., Komori, K., Ishino, Y., Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1J25
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CRYSTAL STRUCTURE OF ARCHAEAL XPF/MUS81 HOMOLOG, HEF FROM PYROCOCCUS FURIOSUS, NUCLEASE DOMAIN, MN COCRYSTAL
Descriptor:ATP-dependent RNA helicase, putative, MANGANESE (II) ION
Authors:Nishino, T., Komori, K., Ishino, Y., Morikawa, K.
Deposit date:2002-12-25
Release date:2003-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes
Structure, 11, 2003
1WP9
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CRYSTAL STRUCTURE OF PYROCOCCUS FURIOSUS HEF HELICASE DOMAIN
Descriptor:ATP-dependent RNA helicase, putative, PHOSPHATE ION
Authors:Nishino, T., Komori, K., Tsuchiya, D., Ishino, Y., Morikawa, K.
Deposit date:2004-08-31
Release date:2005-02-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure and Functional Implications of Pyrococcus furiosus Hef Helicase Domain Involved in Branched DNA Processing
Structure, 13, 2005
1X2I
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CRYSTAL STRUCTURE OF ARCHAEAL XPF/MUS81 HOMOLOG, HEF FROM PYROCOCCUS FURIOSUS, HELIX-HAIRPIN-HELIX DOMAIN
Descriptor:Hef helicase/nuclease
Authors:Nishino, T., Komori, K., Ishino, Y., Morikawa, K.
Deposit date:2005-04-24
Release date:2005-09-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural and Functional Analyses of an Archaeal XPF/Rad1/Mus81 Nuclease: Asymmetric DNA Binding and Cleavage Mechanisms
STRUCTURE, 13, 2005
2CFM
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ATP-DEPENDENT DNA LIGASE FROM PYROCOCCUS FURIOSUS
Descriptor:THERMOSTABLE DNA LIGASE, MAGNESIUM ION, ADENOSINE MONOPHOSPHATE
Authors:Nishida, H., Ishino, Y., Morikawa, K.
Deposit date:2006-02-22
Release date:2006-07-12
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Closed Structure of an Archaeal DNA Ligase from Pyrococcus Furiosus.
J.Mol.Biol., 360, 2006
2ZJ2
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ARCHAEAL DNA HELICASE HJM APO STATE IN FORM 1
Descriptor:Putative ski2-type helicase, SULFATE ION
Authors:Oyama, T., Oka, H., Fujikane, R., Ishino, Y., Morikawa, K.
Deposit date:2008-02-29
Release date:2009-02-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm
Bmc Struct.Biol., 9, 2009
2ZJ5
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ARCHAEAL DNA HELICASE HJM COMPLEXED WITH ADP IN FORM 1
Descriptor:Putative ski2-type helicase, SULFATE ION, ADENOSINE-5'-DIPHOSPHATE
Authors:Oyama, T., Oka, H., Fujikane, R., Ishino, Y., Morikawa, K.
Deposit date:2008-02-29
Release date:2009-02-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm
Bmc Struct.Biol., 9, 2009
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