Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1HNL
DownloadVisualize
BU of 1hnl by Molmil
CRYSTAL STRUCTURE OF A GLUTATHIONYLATED HUMAN LYSOZYME: A FOLDING INTERMEDIATE MIMIC IN THE FORMATION OF A DISULFIDE BOND
Descriptor: GLUTATHIONE, HUMAN LYSOZYME
Authors:Inaka, K, Matsushima, M, Miki, K.
Deposit date:1994-12-22
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a glutathionylated human lysozyme: a folding intermediate mimic in the formation of a disulfide bond.
Acta Crystallogr.,Sect.D, 51, 1995
2LHM
DownloadVisualize
BU of 2lhm by Molmil
CRYSTAL STRUCTURES OF THE APO-AND HOLOMUTANT HUMAN LYSOZYMES WITH AN INTRODUCED CA2+ BINDING SITE
Descriptor: HUMAN LYSOZYME
Authors:Inaka, K, Matsushima, M.
Deposit date:1991-10-02
Release date:1992-04-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the apo- and holomutant human lysozymes with an introduced Ca2+ binding site.
J.Biol.Chem., 266, 1991
1QSW
DownloadVisualize
BU of 1qsw by Molmil
CRYSTAL STRUCTURE ANALYSIS OF A HUMAN LYSOZYME MUTANT W64C C65A
Descriptor: HUMAN LYSOZYME MUTANT
Authors:Inaka, K, Kanaya, E, Kikuchi, M, Miki, K.
Deposit date:1999-06-24
Release date:2001-08-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a mutant human lysozyme with a substituted disulfide bond.
Proteins, 43, 2001
3LHM
DownloadVisualize
BU of 3lhm by Molmil
CRYSTAL STRUCTURES OF THE APO-AND HOLOMUTANT HUMAN LYSOZYMES WITH AN INTRODUCED CA2+ BINDING SITE
Descriptor: CALCIUM ION, HUMAN LYSOZYME
Authors:Inaka, K, Matsushima, M.
Deposit date:1991-10-02
Release date:1992-04-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the apo- and holomutant human lysozymes with an introduced Ca2+ binding site.
J.Biol.Chem., 266, 1991
1LHM
DownloadVisualize
BU of 1lhm by Molmil
THE CRYSTAL STRUCTURE OF A MUTANT LYSOZYME C77(SLASH)95A WITH INCREASED SECRETION EFFICIENCY IN YEAST
Descriptor: HUMAN LYSOZYME
Authors:Inaka, K, Matsushima, M.
Deposit date:1991-10-02
Release date:1992-04-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of a mutant human lysozyme C77/95A with increased secretion efficiency in yeast.
J.Biol.Chem., 266, 1991
1LHJ
DownloadVisualize
BU of 1lhj by Molmil
ROLE OF PROLINE RESIDUES IN HUMAN LYSOZYME STABILITY: A SCANNING CALORIMETRIC STUDY COMBINED WITH X-RAY STRUCTURE ANALYSIS OF PROLINE MUTANTS
Descriptor: HUMAN LYSOZYME
Authors:Inaka, K, Matsushima, M, Herning, T, Kuroki, R, Yutani, K, Kikuchi, M.
Deposit date:1992-03-27
Release date:1994-01-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of proline residues in human lysozyme stability: a scanning calorimetric study combined with X-ray structure analysis of proline mutants.
Biochemistry, 31, 1992
1LHK
DownloadVisualize
BU of 1lhk by Molmil
ROLE OF PROLINE RESIDUES IN HUMAN LYSOZYME STABILITY: A SCANNING CALORIMETRIC STUDY COMBINED WITH X-RAY STRUCTURE ANALYSIS OF PROLINE MUTANTS
Descriptor: HUMAN LYSOZYME
Authors:Inaka, K, Matsushima, M, Herning, T, Kuroki, R, Yutani, K, Kikuchi, M.
Deposit date:1992-03-27
Release date:1994-01-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of proline residues in human lysozyme stability: a scanning calorimetric study combined with X-ray structure analysis of proline mutants.
Biochemistry, 31, 1992
1LHH
DownloadVisualize
BU of 1lhh by Molmil
ROLE OF PROLINE RESIDUES IN HUMAN LYSOZYME STABILITY: A SCANNING CALORIMETRIC STUDY COMBINED WITH X-RAY STRUCTURE ANALYSIS OF PROLINE MUTANTS
Descriptor: HUMAN LYSOZYME
Authors:Inaka, K, Matsushima, M, Herning, T, Kuroki, R, Yutani, K, Kikuchi, M.
Deposit date:1992-03-27
Release date:1994-01-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of proline residues in human lysozyme stability: a scanning calorimetric study combined with X-ray structure analysis of proline mutants.
Biochemistry, 31, 1992
1LHL
DownloadVisualize
BU of 1lhl by Molmil
ROLE OF PROLINE RESIDUES IN HUMAN LYSOZYME STABILITY: A SCANNING CALORIMETRIC STUDY COMBINED WITH X-RAY STRUCTURE ANALYSIS OF PROLINE MUTANTS
Descriptor: HUMAN LYSOZYME
Authors:Inaka, K, Matsushima, M, Herning, T, Kuroki, R, Yutani, K, Kikuchi, M.
Deposit date:1992-03-27
Release date:1994-01-31
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of proline residues in human lysozyme stability: a scanning calorimetric study combined with X-ray structure analysis of proline mutants.
Biochemistry, 31, 1992
5YX1
DownloadVisualize
BU of 5yx1 by Molmil
Crystal structure of hematopoietic prostaglandin D synthase in complex with U004
Descriptor: GLUTATHIONE, GLYCEROL, Hematopoietic prostaglandin D synthase, ...
Authors:Kamo, M, Furubayashi, N, Inaka, K, Aritake, K, Urade, Y, Takaya, D, Tanaka, A.
Deposit date:2017-12-01
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Crystal structure of hematopoietic prostaglandin D synthase in complex with U004
To Be Published
5YWE
DownloadVisualize
BU of 5ywe by Molmil
Crystal structure of hematopoietic prostaglandin D synthase apo form
Descriptor: GLUTATHIONE, GLYCEROL, Hematopoietic prostaglandin D synthase, ...
Authors:Kamo, M, Furubayashi, N, Inaka, K, Aritake, K, Urade, Y.
Deposit date:2017-11-29
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structure of hematopoietic prostaglandin D synthase apo form
To Be Published
1LHI
DownloadVisualize
BU of 1lhi by Molmil
ROLE OF PROLINE RESIDUES IN HUMAN LYSOZYME STABILITY: A SCANNING CALORIMETRIC STUDY COMBINED WITH X-RAY STRUCTURE ANALYSIS OF PROLINE MUTANTS
Descriptor: HUMAN LYSOZYME
Authors:Inaka, K, Matsushima, M, Herning, T, Kuroki, R, Yutani, K, Kikuchi, M.
Deposit date:1992-03-27
Release date:1994-01-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of proline residues in human lysozyme stability: a scanning calorimetric study combined with X-ray structure analysis of proline mutants.
Biochemistry, 31, 1992
1LZ4
DownloadVisualize
BU of 1lz4 by Molmil
ENTHALPIC DESTABILIZATION OF A MUTANT HUMAN LYSOZYME LACKING A DISULFIDE BRIDGE BETWEEN CYSTEINE-77 AND CYSTEINE-95
Descriptor: HUMAN LYSOZYME
Authors:Inaka, K, Matsushima, M, Kuroki, R, Taniyama, Y, Kikuchi, M.
Deposit date:1993-02-03
Release date:1993-10-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Enthalpic destabilization of a mutant human lysozyme lacking a disulfide bridge between cysteine-77 and cysteine-95.
Biochemistry, 31, 1992
1WCY
DownloadVisualize
BU of 1wcy by Molmil
Crystal Structure Of Human Dipeptidyl Peptidase IV (DPPIV) Complex With Diprotin A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Dipeptidyl peptidase IV, ...
Authors:Hiramatsu, H, Yamamoto, A, Kyono, K, Higashiyama, Y, Fukushima, C, Shima, H, Sugiyama, S, Inaka, K, Shimizu, R.
Deposit date:2004-05-07
Release date:2005-05-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of human dipeptidyl peptidase IV (DPPIV) complex with diprotin A
Biol.Chem., 385, 2004
5Y9Z
DownloadVisualize
BU of 5y9z by Molmil
Crystal structure of rat hematopoietic prostaglandin D synthase
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, GLUTATHIONE, ...
Authors:Kamo, M, Furubayashi, N, Inaka, K, Tanaka, H, Aritake, K, Urade, Y.
Deposit date:2017-08-29
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Crystal structure of rat hematopoietic prostaglandin D synthase
To Be Published
9L3S
DownloadVisualize
BU of 9l3s by Molmil
Staphylococcus aureus lipase-Penfluridol complex (in space)
Descriptor: 1-[4,4-bis(4-fluorophenyl)butyl]-4-[4-chloranyl-3-(trifluoromethyl)phenyl]piperidin-4-ol, CALCIUM ION, CHLORIDE ION, ...
Authors:Kitadokoro, J, Hirokawa, T, Kamo, M, Furubayasi, N, Inaka, K, Kamitani, S, Kitadokoro, K.
Deposit date:2024-12-19
Release date:2025-04-30
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structural analysis shows the mode of inhibition for Staphylococcus aureus lipase by antipsychotic penfluridol.
Sci Rep, 15, 2025
3KLR
DownloadVisualize
BU of 3klr by Molmil
Bovine H-protein at 0.88 angstrom resolution
Descriptor: GLYCEROL, Glycine cleavage system H protein, SULFATE ION
Authors:Higashiura, A, Kurakane, T, Matsuda, M, Suzuki, M, Inaka, K, Sato, M, Tanaka, H, Fujiwara, K, Nakagawa, A.
Deposit date:2009-11-09
Release date:2010-06-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (0.88 Å)
Cite:High-resolution X-ray crystal structure of bovine H-protein at 0.88 A resolution
Acta Crystallogr.,Sect.D, 66, 2010
9JU1
DownloadVisualize
BU of 9ju1 by Molmil
Helix-loop-helix peptide (VS42-LR3) in complex with VEGF-A
Descriptor: SULFATE ION, VS42-LR3, Vascular endothelial growth factor A, ...
Authors:Kamo, M, Michigami, M, Inaka, K, Furubayashi, N, Kaito, S, Kobayashi, Y, Shinohara, Y, Fujii, I.
Deposit date:2024-10-07
Release date:2024-12-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural insights into molecular-targeting helix-loop-helix peptide against vascular endothelial growth factor-A.
Biochem Biophys Res Commun, 734, 2024
5YWX
DownloadVisualize
BU of 5ywx by Molmil
Crystal structure of hematopoietic prostaglandin D synthase in complex with F092
Descriptor: GLUTATHIONE, GLYCEROL, Hematopoietic prostaglandin D synthase, ...
Authors:Kamo, M, Furubayashi, N, Inaka, K, Aritake, K, Omura, A, Tanaka, A.
Deposit date:2017-11-30
Release date:2018-09-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Characterization of crystal water molecules in a high-affinity inhibitor and hematopoietic prostaglandin D synthase complex by interaction energy studies.
Bioorg. Med. Chem., 26, 2018
8YK6
DownloadVisualize
BU of 8yk6 by Molmil
Magnetic effects of thaumatin crystals; observation of the crystal growth of magneto-Archimedes levitation and magnetic orientation
Descriptor: L(+)-TARTARIC ACID, Thaumatin I
Authors:Nakabayashi, M, Inaka, K, Fujiwara, M, Hagiwara, M, Maki, S.
Deposit date:2024-03-04
Release date:2025-02-26
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Magnetic effects of thaumatin crystals; observation of crystal growth by magneto-Archimedes levitation and magnetic orientation.
Plos One, 20, 2025
9KKU
DownloadVisualize
BU of 9kku by Molmil
Helix-loop-helix peptide (M49) in complex with VEGF-A
Descriptor: M49, Vascular endothelial growth factor A, long form
Authors:Kamo, M, Michigami, M, Inaka, K, Furubayashi, N, Kaito, S, Kobayashi, Y, Shinohara, Y, Fujii, I.
Deposit date:2024-11-14
Release date:2024-12-11
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structural Insights into Helix-Loop-Helix Peptides for "Ligand-Targeting" Intracellular Drug Delivery via VEGF Receptor-Mediated Endocytosis.
Biochem.Biophys.Res.Commun., 741, 2024
8W4Y
DownloadVisualize
BU of 8w4y by Molmil
Neutron structure of cellulase Cel6A from Phanerochaete chrysosporium at room temperature, low-D2O-solvent
Descriptor: Glucanase
Authors:Tachioka, M, Yamaguchi, S, Nakamura, A, Ishida, T, Kusaka, K, Yamada, T, Yano, N, Chatake, T, Tamada, T, Takeda, K, Niwa, S, Tanaka, H, Takahashi, S, Inaka, K, Furubayashi, N, Deguchi, S, Samejima, M, Igarashi, K.
Deposit date:2023-08-25
Release date:2025-03-12
Method:NEUTRON DIFFRACTION (1.4 Å), X-RAY DIFFRACTION
Cite:Deprotonated Arginine Controls a Putative Catalytic Base in Invert-ing Family 6 Glycoside Hydrolase
To Be Published
8W4X
DownloadVisualize
BU of 8w4x by Molmil
Neutron structure of cellulase Cel6A from Phanerochaete chrysosporium at room temperature, Enzyme-Product complex
Descriptor: Glucanase, SODIUM ION, beta-D-glucopyranose, ...
Authors:Tachioka, M, Yamaguchi, S, Nakamura, A, Ishida, T, Kusaka, K, Yamada, T, Yano, N, Chatake, T, Tamada, T, Takeda, K, Niwa, S, Tanaka, H, Takahashi, S, Inaka, K, Furubayashi, N, Deguchi, S, Samejima, M, Igarashi, K.
Deposit date:2023-08-25
Release date:2025-03-12
Method:NEUTRON DIFFRACTION (1.4 Å), X-RAY DIFFRACTION
Cite:Deprotonated Arginine Controls a Putative Catalytic Base in Invert-ing Family 6 Glycoside Hydrolase
To Be Published
8W8V
DownloadVisualize
BU of 8w8v by Molmil
High-resolution X-ray structure of cellulase Cel6A from Phanerochaete chrysosporium at cryogenic temperature, Enzyme-Product complex
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Glucanase, ...
Authors:Tachioka, M, Yamaguchi, S, Nakamura, A, Ishida, T, Kusaka, K, Yamada, T, Yano, N, Chatake, T, Tamada, T, Takeda, K, Niwa, S, Tanaka, H, Takahashi, S, Inaka, K, Furubayashi, N, Deguchi, S, Samejima, M, Igarashi, K.
Deposit date:2023-09-04
Release date:2025-03-12
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Deprotonated Arginine Controls a Putative Catalytic Base in Invert-ing Family 6 Glycoside Hydrolase
To Be Published
8W8U
DownloadVisualize
BU of 8w8u by Molmil
High-resolution X-ray structure of cellulase Cel6A from Phanerochaete chrysosporium at cryogenic temperature
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Glucanase
Authors:Tachioka, M, Yamaguchi, S, Nakamura, A, Ishida, T, Kusaka, K, Yamada, T, Yano, N, Chatake, T, Tamada, T, Takeda, K, Niwa, S, Tanaka, H, Takahashi, S, Inaka, K, Furubayashi, N, Deguchi, S, Samejima, M, Igarashi, K.
Deposit date:2023-09-04
Release date:2025-03-12
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Deprotonated Arginine Controls a Putative Catalytic Base in Invert-ing Family 6 Glycoside Hydrolase
To Be Published

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon