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1VD2
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SOLUTION STRUCTURE OF THE PB1 DOMAIN OF PKCIOTA
Descriptor:Protein kinase C, iota type
Authors:Hirano, Y., Yoshinaga, S., Yokochi, M., Ogura, K., Noda, Y., Sumimoto, H., Inagaki, F.
Deposit date:2004-03-18
Release date:2004-09-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of atypical protein kinase C PB1 domain and its mode of interaction with ZIP/p62 and MEK5
J.Biol.Chem., 279, 2004
3VRC
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CRYSTAL STRUCTURE OF CYTOCHROME C' FROM THERMOCHROMATIUM TEPIDUM
Descriptor:Cytochrome c', HEME C, CADMIUM ION, ...
Authors:Hirano, Y., Kimura, Y., Suzuki, H., Miki, K., Wang, Z.-Y.
Deposit date:2012-04-09
Release date:2012-09-12
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structure Analysis and Comparative Characterization of the Cytochrome c' and Flavocytochrome c from Thermophilic Purple Photosynthetic Bacterium Thermochromatium tepidum
Biochemistry, 51, 2012
3VRD
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CRYSTAL STRUCTURE OF FLAVOCYTOCHROME C FROM THERMOCHROMATIUM TEPIDUM
Descriptor:Flavocytochrome c heme subunit, Flavocytochrome c flavin subunit, HEME C, ...
Authors:Hirano, Y., Kimura, Y., Suzuki, H., Miki, K., Wang, Z.-Y.
Deposit date:2012-04-09
Release date:2012-09-12
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure Analysis and Comparative Characterization of the Cytochrome c' and Flavocytochrome c from Thermophilic Purple Photosynthetic Bacterium Thermochromatium tepidum
Biochemistry, 51, 2012
5XFL
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CRYSTAL STRUCTURE OF THE FORCE-SENSING DEVICE REGION OF ALPHA N-CATENIN
Descriptor:Catenin alpha-2
Authors:Hirano, Y., Hakoshima, T.
Deposit date:2017-04-10
Release date:2018-03-28
Last modified:2018-05-23
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The force-sensing device region of alpha-catenin is an intrinsically disordered segment in the absence of intramolecular stabilization of the autoinhibitory form
Genes Cells, 23, 2018
5Y04
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CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE VINCULIN D1 DOMAIN AND ALPHAE-CATENIN
Descriptor:Vinculin, Catenin alpha-1
Authors:Hirano, Y., Hakoshima, T.
Deposit date:2017-07-14
Release date:2018-03-28
Last modified:2018-05-23
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:The force-sensing device region of alpha-catenin is an intrinsically disordered segment in the absence of intramolecular stabilization of the autoinhibitory form
Genes Cells, 23, 2018
1WMH
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CRYSTAL STRUCTURE OF A PB1 DOMAIN COMPLEX OF PROTEIN KINASE C IOTA AND PAR6 ALPHA
Descriptor:Protein kinase C, iota type, Partitioning defective-6 homolog alpha
Authors:Hirano, Y., Yoshinaga, S., Suzuki, N.N., Horiuchi, M., Kohjima, M., Takeya, R., Sumimoto, H., Inagaki, F.
Deposit date:2004-07-09
Release date:2004-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of a Cell Polarity Regulator, a Complex between Atypical PKC and Par6 PB1 Domains
J.Biol.Chem., 280, 2005
2Z4H
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CRYSTAL STRUCTURE OF THE CPX PATHWAY ACTIVATOR NLPE FROM ESCHERICHIA COLI
Descriptor:Copper homeostasis protein cutF, SULFATE ION
Authors:Hirano, Y., Hossain, M.M., Takeda, K., Tokuda, H., Miki, K.
Deposit date:2007-06-18
Release date:2007-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Studies of the Cpx Pathway Activator NlpE on the Outer Membrane of Escherichia coli
Structure, 15, 2007
2Z4I
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CRYSTAL STRUCTURE OF THE CPX PATHWAY ACTIVATOR NLPE FROM ESCHERICHIA COLI
Descriptor:Copper homeostasis protein cutF, HEXAETHYLENE GLYCOL, SULFATE ION
Authors:Hirano, Y., Hossain, M.M., Takeda, K., Tokuda, H., Miki, K.
Deposit date:2007-06-18
Release date:2007-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Studies of the Cpx Pathway Activator NlpE on the Outer Membrane of Escherichia coli
Structure, 15, 2007
3A9F
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CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF CYTOCHROME CZ FROM CHLOROBIUM TEPIDUM
Descriptor:Cytochrome c, HEME C, SODIUM ION, ...
Authors:Hirano, Y., Higuchi, M., Azai, C., Oh-oka, H., Miki, K., Wang, Z.-Y.
Deposit date:2009-10-25
Release date:2010-03-02
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the electron carrier domain of the reaction center cytochrome c(z) subunit from green photosynthetic bacterium Chlorobium tepidum
J.Mol.Biol., 397, 2010
3AU4
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STRUCTURE OF THE HUMAN MYOSIN-X MYTH4-FERM CASSETTE BOUND TO ITS SPECIFIC CARGO, DCC
Descriptor:Myosin-X, Netrin receptor DCC
Authors:Hirano, Y., Hatano, T., Hakoshima, T.
Deposit date:2011-01-28
Release date:2011-07-13
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of cargo recognition by the myosin-X MyTH4-FERM domain
Embo J., 30, 2011
3AU5
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STRUCTURE OF THE HUMAN MYOSIN-X MYTH4-FERM CASSETTE
Descriptor:Myosin-X
Authors:Hirano, Y., Takahashi, A., Hakoshima, T.
Deposit date:2011-01-28
Release date:2011-07-13
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis of cargo recognition by the myosin-X MyTH4-FERM domain
Embo J., 30, 2011
3X32
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CRYSTAL STRUCTURE OF THE OXIDIZED FORM OF THE SOLUBILIZED DOMAIN OF PORCINE CYTOCHROME B5 IN FORM 1 CRYSTAL
Descriptor:Cytochrome b5, PROTOPORPHYRIN IX CONTAINING FE, CALCIUM ION, ...
Authors:Hirano, Y., Kimura, S., Tamada, T.
Deposit date:2015-01-14
Release date:2015-07-15
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (0.83 Å)
Cite:High-resolution crystal structures of the solubilized domain of porcine cytochrome b5
Acta Crystallogr.,Sect.D, 71, 2015
3X33
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CRYSTAL STRUCTURE OF THE OXIDIZED FORM OF THE SOLUBILIZED DOMAIN OF PORCINE CYTOCHROME B5 IN FORM 2 CRYSTAL
Descriptor:Cytochrome b5, PROTOPORPHYRIN IX CONTAINING FE, ACETATE ION
Authors:Hirano, Y., Kimura, S., Tamada, T.
Deposit date:2015-01-14
Release date:2015-07-15
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:High-resolution crystal structures of the solubilized domain of porcine cytochrome b5
Acta Crystallogr.,Sect.D, 71, 2015
3X34
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CRYSTAL STRUCTURE OF THE REDUCED FORM OF THE SOLUBILIZED DOMAIN OF PORCINE CYTOCHROME B5 IN FORM 1 CRYSTAL
Descriptor:Cytochrome b5, PROTOPORPHYRIN IX CONTAINING FE, CALCIUM ION
Authors:Hirano, Y., Kimura, S., Tamada, T.
Deposit date:2015-01-14
Release date:2015-07-15
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (0.76 Å)
Cite:High-resolution crystal structures of the solubilized domain of porcine cytochrome b5
Acta Crystallogr.,Sect.D, 71, 2015
3X35
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CRYSTAL STRUCTURE OF THE REDUCED FORM OF THE SOLUBILIZED DOMAIN OF PORCINE CYTOCHROME B5 IN FORM 2 CRYSTAL
Descriptor:Cytochrome b5, PROTOPORPHYRIN IX CONTAINING FE, ACETATE ION
Authors:Hirano, Y., Kimura, S., Tamada, T.
Deposit date:2015-01-14
Release date:2015-07-15
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:High-resolution crystal structures of the solubilized domain of porcine cytochrome b5
Acta Crystallogr.,Sect.D, 71, 2015
5B3G
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THE CRYSTAL STRUCTURE OF THE HETERODIMER OF SHORT-ROOT AND SCARECROW GRAS DOMAINS
Descriptor:Protein SCARECROW, Protein SHORT-ROOT, PHOSPHATE ION, ...
Authors:Hirano, Y., Nakagawa, M., Hakoshima, T.
Deposit date:2016-02-29
Release date:2017-03-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD
Nat Plants, 3, 2017
5B3H
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THE CRYSTAL STRUCTURE OF THE JACKDAW/IDD10 BOUND TO THE HETERODIMERIC SHR-SCR COMPLEX
Descriptor:Protein SCARECROW, Protein SHORT-ROOT, Zinc finger protein JACKDAW, ...
Authors:Hirano, Y., Suyama, T., Nakagawa, M., Hakoshima, T.
Deposit date:2016-02-29
Release date:2017-03-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD
Nat Plants, 3, 2017
5D8V
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ULTRA-HIGH RESOLUTION STRUCTURE OF HIGH-POTENTIAL IRON-SULFUR PROTEIN
Descriptor:High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, SULFATE ION, ...
Authors:Hirano, Y., Takeda, K., Miki, K.
Deposit date:2015-08-18
Release date:2016-05-25
Last modified:2017-02-22
Method:X-RAY DIFFRACTION (0.48 Å)
Cite:Charge-density analysis of an iron-sulfur protein at an ultra-high resolution of 0.48 angstrom
Nature, 534, 2016
5Y6T
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CRYSTAL STRUCTURE OF ENDO-1,4-BETA-MANNANASE FROM EISENIA FETIDA
Descriptor:endo-1,4-beta-mannanase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ISOPROPYL ALCOHOL
Authors:Hirano, Y., Ueda, M., Tamada, T.
Deposit date:2017-08-15
Release date:2018-06-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Gene cloning, expression, and X-ray crystallographic analysis of a beta-mannanase from Eisenia fetida
Enzyme.Microb.Technol., 117, 2018
3AAB
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SMALL HEAT SHOCK PROTEIN HSP14.0 WITH THE MUTATIONS OF I120F AND I122F IN THE FORM I CRYSTAL
Descriptor:Putative uncharacterized protein ST1653, GLYCEROL, ISOPROPYL ALCOHOL
Authors:Takeda, K., Hayashi, T., Abe, T., Hirano, Y., Hanazono, Y., Yohda, M., Miki, K.
Deposit date:2009-11-13
Release date:2010-11-17
Last modified:2011-12-07
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Dimer structure and conformational variability in the N-terminal region of an archaeal small heat shock protein, StHsp14.0
J.Struct.Biol., 174, 2011
3AAC
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SMALL HEAT SHOCK PROTEIN HSP14.0 WITH THE MUTATIONS OF I120F AND I122F IN THE FORM II CRYSTAL
Descriptor:Putative uncharacterized protein ST1653
Authors:Takeda, K., Hayashi, T., Abe, T., Hirano, Y., Hanazono, Y., Yohda, M., Miki, K.
Deposit date:2009-11-13
Release date:2010-11-17
Last modified:2011-12-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dimer structure and conformational variability in the N-terminal region of an archaeal small heat shock protein, StHsp14.0
J.Struct.Biol., 174, 2011
3W04
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CRYSTAL STRUCTURE OF ORYZA SATIVA DWARF14 (D14)
Descriptor:Dwarf 88 esterase, (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ...
Authors:Kagiyama, M., Hirano, Y., Mori, T., Kim, S.Y., Kyozuka, J., Seto, Y., Yamaguchi, S., Hakoshima, T.
Deposit date:2012-10-19
Release date:2013-01-23
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structures of D14 and D14L in the strigolactone and karrikin signaling pathways
Genes Cells, 18, 2013
3W05
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CRYSTAL STRUCTURE OF ORYZA SATIVA DWARF14 (D14) IN COMPLEX WITH PMSF
Descriptor:Dwarf 88 esterase, phenylmethanesulfonic acid, 1,2-ETHANEDIOL
Authors:Kagiyama, M., Hirano, Y., Mori, T., Kim, S.Y., Kyozuka, J., Seto, Y., Yamaguchi, S., Hakoshima, T.
Deposit date:2012-10-19
Release date:2013-01-23
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structures of D14 and D14L in the strigolactone and karrikin signaling pathways
Genes Cells, 18, 2013
3W06
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CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA DWARF14 LIKE (ATD14L)
Descriptor:Hydrolase, alpha/beta fold family protein, 1,2-ETHANEDIOL
Authors:Kagiyama, M., Hirano, Y., Mori, T., Kim, S.Y., Kyozuka, J., Seto, Y., Yamaguchi, S., Hakoshima, T.
Deposit date:2012-10-19
Release date:2013-01-23
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structures of D14 and D14L in the strigolactone and karrikin signaling pathways
Genes Cells, 18, 2013
5WQQ
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HIGH RESOLUTION STRUCTURE OF HIGH-POTENTIAL IRON-SULFUR PROTEIN IN THE OXIDIZED STATE
Descriptor:High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, SULFATE ION, ...
Authors:Ohno, H., Takeda, K., Niwa, S., Tsujinaka, T., Hanazono, Y., Hirano, Y., Miki, K.
Deposit date:2016-11-28
Release date:2017-06-07
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Crystallographic characterization of the high-potential iron-sulfur protein in the oxidized state at 0.8 angstrom resolution
PLoS ONE, 12, 2017
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