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6LII
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BU of 6lii by Molmil
A quinone oxidoreductase
Descriptor: Synaptic vesicle membrane protein VAT-1 homolog
Authors:Hakoshima, T, Kim, S.-Y, Mori, T.
Deposit date:2019-12-11
Release date:2021-01-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into vesicle amine transport-1 (VAT-1) as a member of the NADPH-dependent quinone oxidoreductase family.
Sci Rep, 11, 2021
6LHR
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BU of 6lhr by Molmil
Crystal structure of the complex between Vesicle Amine Transport-1 and NADP
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Synaptic vesicle membrane protein VAT-1 homolog
Authors:Hakoshima, T, Kim, S.-Y, Mori, T.
Deposit date:2019-12-09
Release date:2021-01-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural insights into vesicle amine transport-1 (VAT-1) as a member of the NADPH-dependent quinone oxidoreductase family.
Sci Rep, 11, 2021
2YVC
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BU of 2yvc by Molmil
Crystal structure of the Radixin FERM domain complexed with the NEP cytoplasmic tail
Descriptor: Neprilysin, Radixin
Authors:Terawaki, S, Kitano, K, Hakoshima, T.
Deposit date:2007-04-11
Release date:2007-04-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for type II membrane protein binding by ERM proteins revealed by the radixin-neutral endopeptidase 24.11 (NEP) complex
J.Biol.Chem., 282, 2007
1NPM
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BU of 1npm by Molmil
NEUROPSIN, A SERINE PROTEASE EXPRESSED IN THE LIMBIC SYSTEM OF MOUSE BRAIN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NEUROPSIN
Authors:Kishi, T, Kato, M, Shimizu, T, Kato, K, Matsumoto, K, Yoshida, S, Shiosaka, S, Hakoshima, T.
Deposit date:1998-01-07
Release date:1999-03-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of neuropsin, a hippocampal protease involved in kindling epileptogenesis.
J.Biol.Chem., 274, 1999
2D10
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BU of 2d10 by Molmil
Crystal structure of the Radixin FERM domain complexed with the NHERF-1 C-terminal tail peptide
Descriptor: Ezrin-radixin-moesin binding phosphoprotein 50, Radixin
Authors:Terawaki, S, Maesaki, R, Hakoshima, T.
Deposit date:2005-08-11
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for NHERF recognition by ERM proteins
Structure, 14, 2006
2D11
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BU of 2d11 by Molmil
Crystal structure of the Radixin FERM domain complexed with the NHERF-2 C-terminal tail peptide
Descriptor: Na(+)/H(+) exchange regulatory cofactor NHE-RF2, Radixin
Authors:Terawaki, S, Maesaki, R, Hakoshima, T.
Deposit date:2005-08-11
Release date:2006-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural basis for NHERF recognition by ERM proteins
Structure, 14, 2006
2A0B
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BU of 2a0b by Molmil
HISTIDINE-CONTAINING PHOSPHOTRANSFER DOMAIN OF ARCB FROM ESCHERICHIA COLI
Descriptor: HPT DOMAIN, ZINC ION
Authors:Kato, M, Mizuno, T, Shimizu, T, Hakoshima, T.
Deposit date:1998-04-02
Release date:1998-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Refined structure of the histidine-containing phosphotransfer (HPt) domain of the anaerobic sensor kinase ArcB from Escherichia coli at 1.57 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1A0B
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BU of 1a0b by Molmil
HISTIDINE-CONTAINING PHOSPHOTRANSFER DOMAIN OF ARCB FROM ESCHERICHIA COLI
Descriptor: AEROBIC RESPIRATION CONTROL SENSOR PROTEIN ARCB, ZINC ION
Authors:Kato, M, Mizuno, T, Shimizu, T, Hakoshima, T.
Deposit date:1997-11-27
Release date:1998-03-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Insights into multistep phosphorelay from the crystal structure of the C-terminal HPt domain of ArcB.
Cell(Cambridge,Mass.), 88, 1997
2IRF
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BU of 2irf by Molmil
CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX.
Descriptor: DNA (5'-D(*TP*TP*CP*AP*CP*TP*TP*TP*CP*AP*CP*(5IU)P*T)-3'), DNA (5'-D(P*AP*AP*GP*TP*GP*AP*AP*AP*GP*(5IU)P*GP*A)-3'), INTERFERON REGULATORY FACTOR 2, ...
Authors:Fujii, Y, Shimizu, T, Kusumoto, M, Kyogoku, Y, Taniguchi, T, Hakoshima, T.
Deposit date:1999-05-30
Release date:1999-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of an IRF-DNA complex reveals novel DNA recognition and cooperative binding to a tandem repeat of core sequences.
EMBO J., 18, 1999
1J19
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BU of 1j19 by Molmil
Crystal structure of the radxin FERM domain complexed with the ICAM-2 cytoplasmic peptide
Descriptor: 16-mer peptide from Intercellular adhesion molecule-2, radixin
Authors:Hamada, K, Shimizu, T, Yonemura, S, Tsukita, S, Tsukita, S, Hakoshima, T.
Deposit date:2002-12-02
Release date:2003-03-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of adhesion-molecule recognition by ERM proteins revealed by the crystal structure of the radixin-ICAM-2 complex
EMBO J., 22, 2003
1GD2
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BU of 1gd2 by Molmil
CRYSTAL STRUCTURE OF BZIP TRANSCRIPTION FACTOR PAP1 BOUND TO DNA
Descriptor: DNA (5'-D(*AP*GP*GP*TP*TP*AP*CP*GP*TP*AP*AP*CP*C)-3'), TRANSCRIPTION FACTOR PAP1
Authors:Fujii, Y, Shimizu, T, Toda, T, Yanagida, M, Hakoshima, T.
Deposit date:2000-08-25
Release date:2000-10-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the diversity of DNA recognition by bZIP transcription factors.
Nat.Struct.Biol., 7, 2000
1GC7
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BU of 1gc7 by Molmil
CRYSTAL STRUCTURE OF THE RADIXIN FERM DOMAIN
Descriptor: RADIXIN
Authors:Hamada, K, Shimizu, T, Matsui, T, Tsukita, S, Tsukita, S, Hakoshima, T.
Deposit date:2000-07-21
Release date:2000-09-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of the membrane-targeting and unmasking mechanisms of the radixin FERM domain.
EMBO J., 19, 2000
1GC6
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BU of 1gc6 by Molmil
CRYSTAL STRUCTURE OF THE RADIXIN FERM DOMAIN COMPLEXED WITH INOSITOL-(1,4,5)-TRIPHOSPHATE
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, RADIXIN
Authors:Hamada, K, Shimizu, T, Matsui, T, Tsukita, S, Tsukita, S, Hakoshima, T.
Deposit date:2000-07-21
Release date:2000-09-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of the membrane-targeting and unmasking mechanisms of the radixin FERM domain.
EMBO J., 19, 2000
6KYW
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BU of 6kyw by Molmil
S8-mSRK-S8-SP11 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor protein kinase SRK8, S locus protein 11
Authors:Murase, K, Hakoshima, T, Mori, T.
Deposit date:2019-09-20
Release date:2020-09-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.60112739 Å)
Cite:Mechanism of self/nonself-discrimination in Brassica self-incompatibility.
Nat Commun, 11, 2020
1CXZ
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BU of 1cxz by Molmil
CRYSTAL STRUCTURE OF HUMAN RHOA COMPLEXED WITH THE EFFECTOR DOMAIN OF THE PROTEIN KINASE PKN/PRK1
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, PROTEIN (HIS-TAGGED TRANSFORMING PROTEIN RHOA(0-181)), ...
Authors:Maesaki, R, Ihara, K, Shimizu, T, Kuroda, S, Kaibuchi, K, Hakoshima, T.
Deposit date:1999-08-31
Release date:1999-10-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structural basis of Rho effector recognition revealed by the crystal structure of human RhoA complexed with the effector domain of PKN/PRK1.
Mol.Cell, 4, 1999
5XAV
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BU of 5xav by Molmil
Structure of PhaC from Chromobacterium sp. USM2
Descriptor: Intracellular polyhydroxyalkanoate synthase
Authors:Chek, M.F, Kim, S.Y, Mori, T, Arsad, H, Samian, M.R, Sudesh, K, Hakoshima, T.
Deposit date:2017-03-15
Release date:2017-07-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.479 Å)
Cite:Structure of polyhydroxyalkanoate (PHA) synthase PhaC from Chromobacterium sp. USM2, producing biodegradable plastics
Sci Rep, 7, 2017
9KNK
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BU of 9knk by Molmil
Crystal structure of full-length PHA synthase (PhaC) from Aeromonas caviae
Descriptor: PHA synthase
Authors:Chek, M.F, Kim, S.Y, Mori, T, Hakoshima, T.
Deposit date:2024-11-19
Release date:2025-05-21
Last modified:2025-07-09
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Structures of Polyhydroxyalkanoate Synthase PhaC from Aeromonas caviae, Producing Biodegradable Plastics.
Angew.Chem.Int.Ed.Engl., 64, 2025
9KNL
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BU of 9knl by Molmil
Crystal structure of triethylene glycol-bound full-length PHA synthase (PhaC) from Aeromonas caviae
Descriptor: PHA synthase, TRIETHYLENE GLYCOL
Authors:Chek, M.F, Kim, S.Y, Mori, T, Hakoshima, T.
Deposit date:2024-11-19
Release date:2025-05-21
Last modified:2025-07-09
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of Polyhydroxyalkanoate Synthase PhaC from Aeromonas caviae, Producing Biodegradable Plastics.
Angew.Chem.Int.Ed.Engl., 64, 2025
9KNJ
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BU of 9knj by Molmil
Crystal structure of glycerol-bound full-length PHA synthase (PhaC) from Aeromonas caviae
Descriptor: GLYCEROL, PHA synthase
Authors:Chek, M.F, Kim, S.Y, Mori, T, Hakoshima, T.
Deposit date:2024-11-19
Release date:2025-05-21
Last modified:2025-07-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of Polyhydroxyalkanoate Synthase PhaC from Aeromonas caviae, Producing Biodegradable Plastics.
Angew.Chem.Int.Ed.Engl., 64, 2025
2RRD
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BU of 2rrd by Molmil
Structure of HRDC domain from human Bloom syndrome protein, BLM
Descriptor: HRDC domain from Bloom syndrome protein
Authors:Sato, A, Mishima, M, Nagai, A, Kim, S.Y, Ito, Y, Hakoshima, T, Jee, J.G, Kitano, K.
Deposit date:2010-07-19
Release date:2010-09-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the HRDC domain of human Bloom syndrome protein BLM
J.Biochem., 148, 2010
6L0W
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BU of 6l0w by Molmil
Structure of RLD2 BRX domain bound to LZY3 CCL motif
Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, NGR2, ...
Authors:Hirano, Y, Futrutani, M, Nishimura, T, Taniguchi, M, Morita, M.T, Hakoshima, T.
Deposit date:2019-09-27
Release date:2020-02-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.591 Å)
Cite:Polar recruitment of RLD by LAZY1-like protein during gravity signaling in root branch angle control.
Nat Commun, 11, 2020
4ZKF
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BU of 4zkf by Molmil
Crystal structure of human phosphodiesterase 12
Descriptor: 2',5'-phosphodiesterase 12, MAGNESIUM ION
Authors:Kim, S.Y, Kohno, T, Mori, T, Kitano, K, Hakoshima, T.
Deposit date:2015-04-30
Release date:2015-06-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of human phosphodiesterase
To Be Published
1QQ2
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BU of 1qq2 by Molmil
CRYSTAL STRUCTURE OF A MAMMALIAN 2-CYS PEROXIREDOXIN, HBP23.
Descriptor: CHLORIDE ION, THIOREDOXIN PEROXIDASE 2
Authors:Hirotsu, S, Abe, Y, Okada, K, Nagahara, N, Hori, H, Nishino, T, Hakoshima, T.
Deposit date:1999-06-10
Release date:1999-10-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a multifunctional 2-Cys peroxiredoxin heme-binding protein 23 kDa/proliferation-associated gene product.
Proc.Natl.Acad.Sci.USA, 96, 1999
1BDJ
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BU of 1bdj by Molmil
COMPLEX STRUCTURE OF HPT DOMAIN AND CHEY
Descriptor: AEROBIC RESPIRATION CONTROL SENSOR PROTEIN ARCB, CHEY, SULFATE ION
Authors:Kato, M, Mizuno, T, Shimizu, T, Hakoshima, T.
Deposit date:1998-05-10
Release date:1999-05-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structure of the histidine-containing phosphotransfer (HPt) domain of the anaerobic sensor protein ArcB complexed with the chemotaxis response regulator CheY.
Acta Crystallogr.,Sect.D, 55, 1999
3X23
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BU of 3x23 by Molmil
Radixin complex
Descriptor: Peptide from Matrix metalloproteinase-14, Radixin
Authors:Terawaki, S, Kitano, K, Aoyama, M, Mori, T, Hakoshima, T.
Deposit date:2014-12-09
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:MT1-MMP recognition by ERM proteins and its implication in CD44 shedding
Genes Cells, 20, 2015

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