Author results

2RRE
  • Download 2rre
  • View 2rre
Molmil generated image of 2rre
STRUCTURE AND FUNCTION OF THE N-TERMINAL NUCLEOLIN BINDING DOMAIN OF NUCLEAR VALOCINE CONTAINING PROTEIN LIKE 2 (NVL2) HARBORING A NUCLEOLAR LOCALIZATION SIGNAL
Descriptor:Putative uncharacterized protein
Authors:Fujiwara, Y., Fujiwara, K., Goda, N., Iwaya, N., Tenno, T., Shirakawa, M., Hiroaki, H.
Deposit date:2010-08-03
Release date:2011-04-06
Last modified:2011-11-23
Method:SOLUTION NMR
Cite:Structure and function of the N-terminal nucleolin binding domain of nuclear valosin-containing protein-like 2 (NVL2) harboring a nucleolar localization signal
J.Biol.Chem., 286, 2011
3VMX
  • Download 3vmx
  • View 3vmx
Molmil generated image of 3vmx
CRYSTAL STRUCTURE OF A PARALLEL COILED-COIL DIMERIZATION DOMAIN FROM THE VOLTAGE-GATED PROTON CHANNEL
Descriptor:Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y., Takeshita, K., Kobayashi, M., Okamura, Y., Nakagawa, A.
Deposit date:2011-12-19
Release date:2012-05-30
Last modified:2013-06-26
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The cytoplasmic coiled-coil mediates cooperative gating temperature sensitivity in the voltage-gated H(+) channel Hv1
Nat Commun, 3, 2012
3VMY
  • Download 3vmy
  • View 3vmy
Molmil generated image of 3vmy
CRYSTAL STRUCTURE OF A PARALLEL COILED-COIL DIMERIZATION DOMAIN FROM THE VOLTAGE-GATED PROTON CHANNEL (REDUCTION/DTT)
Descriptor:Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y., Takeshita, K., Kobayashi, M., Okamura, Y., Nakagawa, A.
Deposit date:2011-12-19
Release date:2013-01-30
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Reduction/Dtt)
To be Published
3VMZ
  • Download 3vmz
  • View 3vmz
Molmil generated image of 3vmz
CRYSTAL STRUCTURE OF A PARALLEL COILED-COIL DIMERIZATION DOMAIN FROM THE VOLTAGE-GATED PROTON CHANNEL (OXIDATION/H2O2)
Descriptor:Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y., Takeshita, K., Kobayashi, M., Okamura, Y., Nakagawa, A.
Deposit date:2011-12-19
Release date:2013-01-30
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Oxidation/H2O2)
To be Published
3VN0
  • Download 3vn0
  • View 3vn0
Molmil generated image of 3vn0
CRYSTAL STRUCTURE OF A PARALLEL COILED-COIL DIMERIZATION DOMAIN FROM THE VOLTAGE-GATED PROTON CHANNEL (MUTATION/C245S)
Descriptor:Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y., Takeshita, K., Kobayashi, M., Okamura, Y., Nakagawa, A.
Deposit date:2011-12-19
Release date:2013-01-30
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Mutation/C245S)
To be Published
3AXA
  • Download 3axa
  • View 3axa
Molmil generated image of 3axa
CRYSTAL STRUCTURE OF AFADIN PDZ DOMAIN IN COMPLEX WITH THE C-TERMINAL PEPTIDE FROM NECTIN-3
Descriptor:Afadin, Nectin-3
Authors:Fujiwara, Y., Goda, N., Narita, H., Satomura, K., Nakagawa, A., Sakisaka, T., Suzuki, M., Hiroaki, H.
Deposit date:2011-03-31
Release date:2012-04-25
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Crystal structure of afadin PDZ domain-nectin-3 complex shows the structural plasticity of the ligand-binding site.
Protein Sci., 24, 2015
3VYI
  • Download 3vyi
  • View 3vyi
Molmil generated image of 3vyi
CRYSTAL STRUCTURE OF A TRIMERIC COILED-COIL (I/I-TYPE) ASSEMBLY DOMAIN FROM THE VOLTAGE-GATED PROTON CHANNEL MUTANT
Descriptor:Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y., Takeshita, K., Nakagawa, A.
Deposit date:2012-09-25
Release date:2013-02-27
Method:X-RAY DIFFRACTION (2.305 Å)
Cite:Gating of the designed trimeric/tetrameric voltage-gated H+ channel.
J.Physiol.(Paris), 591, 2013
3E7K
  • Download 3e7k
  • View 3e7k
Molmil generated image of 3e7k
CRYSTAL STRUCTURE OF AN ANTIPARALLEL COILED-COIL TETRAMERIZATION DOMAIN FROM TRPM7 CHANNELS
Descriptor:TRPM7 channel
Authors:Fujiwara, Y., Minor, D.L.
Deposit date:2008-08-18
Release date:2008-09-23
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:X-ray crystal structure of a TRPM assembly domain reveals an antiparallel four-stranded coiled-coil.
J.Mol.Biol., 383, 2008
3WKV
  • Download 3wkv
  • View 3wkv
Molmil generated image of 3wkv
VOLTAGE-GATED PROTON CHANNEL: VSOP/HV1 CHIMERIC CHANNEL
Descriptor:Ion channel
Authors:Takeshita, K., Sakata, S., Yamashita, E., Fujiwara, Y., Kawanabe, A., Kurokawa, T., Okochi, Y., Matsuda, M., Narita, H., Okamura, Y., Nakagawa, A.
Deposit date:2013-10-31
Release date:2014-03-05
Method:X-RAY DIFFRACTION (3.453 Å)
Cite:X-ray crystal structure of voltage-gated proton channel
Nat.Struct.Mol.Biol., 2014
4Z2M
  • Download 4z2m
  • View 4z2m
Molmil generated image of 4z2m
CRYSTAL STRUCTURE OF HUMAN SPT16 MID-AID/H3-H4 TETRAMER FACT HISTONE COMPLEX
Descriptor:FACT complex subunit SPT16, Histone H3.1, Histone H4
Authors:Tsunaka, Y., Fujiwara, Y., Oyama, T., Hirose, S., Morikawa, K.
Deposit date:2015-03-30
Release date:2016-03-09
Last modified:2016-03-30
Method:X-RAY DIFFRACTION (2.981 Å)
Cite:Integrated molecular mechanism directing nucleosome reorganization by human FACT.
Genes Dev., 30, 2016
4Z2N
  • Download 4z2n
  • View 4z2n
Molmil generated image of 4z2n
CRYSTAL STRUCTURE OF HUMAN FACT SPT16 MIDDLE DOMAIN
Descriptor:FACT complex subunit SPT16
Authors:Tsunaka, Y., Fujiwara, Y., Oyama, T., Hirose, S., Morikawa, K.
Deposit date:2015-03-30
Release date:2016-03-09
Last modified:2016-03-30
Method:X-RAY DIFFRACTION (1.923 Å)
Cite:Integrated molecular mechanism directing nucleosome reorganization by human FACT.
Genes Dev., 30, 2016
1IXR
  • Download 1ixr
  • View 1ixr
Molmil generated image of 1ixr
RUVA-RUVB COMPLEX
Descriptor:Holliday junction DNA helicase ruvA, RuvB, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Yamada, K., Miyata, T., Tsuchiya, D., Oyama, T., Fujiwara, Y., Ohnishi, T., Iwasaki, H., Shinagawa, H., Ariyoshi, M., Mayanagi, K., Morikawa, K.
Deposit date:2002-07-04
Release date:2002-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of the RuvA-RuvB Complex: A Structural Basis for the Holliday Junction Migrating Motor Machinery
Mol.Cell, 10, 2002
1IXS
  • Download 1ixs
  • View 1ixs
Molmil generated image of 1ixs
STRUCTURE OF RUVB COMPLEXED WITH RUVA DOMAIN III
Descriptor:Holliday junction DNA helicase ruvA, RuvB, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Yamada, K., Miyata, T., Tsuchiya, D., Oyama, T., Fujiwara, Y., Ohnishi, T., Iwasaki, H., Shinagawa, H., Ariyoshi, M., Mayanagi, K., Morikawa, K.
Deposit date:2002-07-04
Release date:2002-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of the RuvA-RuvB Complex: A Structural Basis for the Holliday Junction Migrating Motor Machinery
Mol.Cell, 10, 2002
3DVE
  • Download 3dve
  • View 3dve
Molmil generated image of 3dve
CRYSTAL STRUCTURE OF CA2+/CAM-CAV2.2 IQ DOMAIN COMPLEX
Descriptor:Calmodulin, Voltage-dependent N-type calcium channel subunit alpha-1B, CALCIUM ION, ...
Authors:Kim, E.Y., Rumpf, C.H., Fujiwara, Y., Cooley, E.S., Van Petegem, F., Minor, D.L.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
3DVJ
  • Download 3dvj
  • View 3dvj
Molmil generated image of 3dvj
CRYSTAL STRUCTURE OF CA2+/CAM-CAV2.2 IQ DOMAIN (WITHOUT CLONING ARTIFACT, HM TO TV) COMPLEX
Descriptor:Calmodulin, Voltage-dependent N-type calcium channel subunit alpha-1B, CALCIUM ION
Authors:Kim, E.Y., Rumpf, C.H., Fujiwara, Y., Cooley, E.S., Van Petegem, F., Minor, D.L.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
3DVK
  • Download 3dvk
  • View 3dvk
Molmil generated image of 3dvk
CRYSTAL STRUCTURE OF CA2+/CAM-CAV2.3 IQ DOMAIN COMPLEX
Descriptor:Calmodulin, Voltage-dependent R-type calcium channel subunit alpha-1E, CALCIUM ION
Authors:Kim, E.Y., Rumpf, C.H., Fujiwara, Y., Cooley, E.S., Van Petegem, F., Minor, D.L.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
3DVM
  • Download 3dvm
  • View 3dvm
Molmil generated image of 3dvm
CRYSTAL STRUCTURE OF CA2+/CAM-CAV2.1 IQ DOMAIN COMPLEX
Descriptor:Calmodulin, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, CALCIUM ION
Authors:Kim, E.Y., Rumpf, C.H., Fujiwara, Y., Cooley, E.S., Van Petegem, F., Minor, D.L.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
2RPA
  • Download 2rpa
  • View 2rpa
Molmil generated image of 2rpa
THE SOLUTION STRUCTURE OF N-TERMINAL DOMAIN OF MICROTUBULE SEVERING ENZYME
Descriptor:Katanin p60 ATPase-containing subunit A1
Authors:Iwaya, N., Kuwahara, Y., Unzai, S., Nagata, T., Tomii, K., Goda, N., Tochio, H., Shirakawa, M., Hiroaki, H.
Deposit date:2008-05-13
Release date:2009-05-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A common substrate recognition mode conserved between katanin P60 and VPS4 governs microtubule severing and membrane skeleton reorganization
J.Biol.Chem., 285, 2010
5H35
  • Download 5h35
  • View 5h35
Molmil generated image of 5h35
CRYSTAL STRUCTURES OF THE TRIC TRIMERIC INTRACELLULAR CATION CHANNEL ORTHOLOGUE FROM SULFOLOBUS SOLFATARICUS
Descriptor:Fab Heavy Chain, Fab Light Chain, Membrane protein TRIC, ...
Authors:Kasuya, G., Hiraizumi, M., Hattori, M., Nureki, O.
Deposit date:2016-10-20
Release date:2017-01-11
Method:X-RAY DIFFRACTION (2.642 Å)
Cite:Crystal structures of the TRIC trimeric intracellular cation channel orthologues
Cell Res., 26, 2016
5H36
  • Download 5h36
  • View 5h36
Molmil generated image of 5h36
CRYSTAL STRUCTURES OF THE TRIC TRIMERIC INTRACELLULAR CATION CHANNEL ORTHOLOGUE FROM RHODOBACTER SPHAEROIDES
Descriptor:Uncharacterized protein TRIC, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
Authors:Kasuya, G., Hiraizumi, M., Hattori, M., Nureki, O.
Deposit date:2016-10-20
Release date:2017-01-11
Method:X-RAY DIFFRACTION (3.409 Å)
Cite:Crystal structures of the TRIC trimeric intracellular cation channel orthologues
Cell Res., 26, 2016
5F1C
  • Download 5f1c
  • View 5f1c
Molmil generated image of 5f1c
CRYSTAL STRUCTURE OF AN INVERTEBRATE P2X RECEPTOR FROM THE GULF COAST TICK IN THE PRESENCE OF ATP AND ZN2+ ION AT 2.9 ANGSTROMS
Descriptor:Putative uncharacterized protein, N-ACETYL-D-GLUCOSAMINE, ZINC ION, ...
Authors:Kasuya, G., Hattori, M., Ishitani, R., Nureki, O.
Deposit date:2015-11-30
Release date:2016-03-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Insights into Divalent Cation Modulations of ATP-Gated P2X Receptor Channels
Cell Rep, 14, 2016
5WIR
  • Download 5wir
  • View 5wir
Molmil generated image of 5wir
STRUCTURE OF THE TRF1-TERB1 INTERFACE
Descriptor:TERB1-TBM, Telomeric repeat-binding factor 1
Authors:Nandakumar, J., Pendlebury, D.F., Smith, E.M., Tesmer, V.M.
Deposit date:2017-07-20
Release date:2017-10-18
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dissecting the telomere-inner nuclear membrane interface formed in meiosis.
Nat. Struct. Mol. Biol., 24, 2017
5WZY
  • Download 5wzy
  • View 5wzy
Molmil generated image of 5wzy
CRYSTAL STRUCTURE OF THE P2X4 RECEPTOR FROM ZEBRAFISH IN THE PRESENCE OF CTP AT 2.8 ANGSTROMS
Descriptor:p2X purinoceptor, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Kasuya, G., Hattori, M., Nureki, O.
Deposit date:2017-01-19
Release date:2017-04-05
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:Structural insights into the nucleotide base specificity of P2X receptors
Sci Rep, 7, 2017
2VNS
  • Download 2vns
  • View 2vns
Molmil generated image of 2vns
CRYSTAL STRUCTURE OF THE MEMBRANE PROXIMAL OXIDOREDUCTASE DOMAIN OF HUMAN STEAP3, THE DOMINANT FERRIC REDUCTASE OF THE ERYTHROID TRANSFERRIN CYCLE
Descriptor:METALLOREDUCTASE STEAP3, CITRIC ACID
Authors:Sendamarai, A.K., Ohgami, R.S., Fleming, M.D., Lawrence, C.M.
Deposit date:2008-02-07
Release date:2008-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Membrane Proximal Oxidoreductase Domain of Human Steap3, the Dominant Ferrireductase of the Erythroid Transferrin Cycle
Proc.Natl.Acad.Sci.USA, 105, 2008
2VQ3
  • Download 2vq3
  • View 2vq3
Molmil generated image of 2vq3
CRYSTAL STRUCTURE OF THE MEMBRANE PROXIMAL OXIDOREDUCTASE DOMAIN OF HUMAN STEAP3, THE DOMINANT FERRIC REDUCTASE OF THE ERYTHROID TRANSFERRIN CYCLE
Descriptor:METALLOREDUCTASE STEAP3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, CITRIC ACID
Authors:Sendamarai, A.K., Ohgami, R.S., Fleming, M.D., Lawrence, C.M.
Deposit date:2008-03-10
Release date:2008-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Membrane Proximal Oxidoreductase Domain of Human Steap3, the Dominant Ferrireductase of the Erythroid Transferrin Cycle
Proc.Natl.Acad.Sci.USA, 105, 2008