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2RRE
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BU of 2rre by Molmil
Structure and function of the N-terminal nucleolin binding domain of nuclear valocine containing protein like 2 (NVL2) harboring a nucleolar localization signal
Descriptor: Putative uncharacterized protein
Authors:Fujiwara, Y, Fujiwara, K, Goda, N, Iwaya, N, Tenno, T, Shirakawa, M, Hiroaki, H.
Deposit date:2010-08-03
Release date:2011-04-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and function of the N-terminal nucleolin binding domain of nuclear valosin-containing protein-like 2 (NVL2) harboring a nucleolar localization signal
J.Biol.Chem., 286, 2011
3E7K
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BU of 3e7k by Molmil
Crystal Structure of an antiparallel coiled-coil tetramerization domain from TRPM7 channels
Descriptor: TRPM7 channel
Authors:Fujiwara, Y, Minor, D.L.
Deposit date:2008-08-18
Release date:2008-09-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:X-ray crystal structure of a TRPM assembly domain reveals an antiparallel four-stranded coiled-coil.
J.Mol.Biol., 383, 2008
3VMX
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BU of 3vmx by Molmil
Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel
Descriptor: Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
Deposit date:2011-12-19
Release date:2012-05-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The cytoplasmic coiled-coil mediates cooperative gating temperature sensitivity in the voltage-gated H(+) channel Hv1
Nat Commun, 3, 2012
3AXA
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BU of 3axa by Molmil
Crystal structure of afadin PDZ domain in complex with the C-terminal peptide from nectin-3
Descriptor: Afadin, Nectin-3
Authors:Fujiwara, Y, Goda, N, Narita, H, Satomura, K, Nakagawa, A, Sakisaka, T, Suzuki, M, Hiroaki, H.
Deposit date:2011-03-31
Release date:2012-04-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Crystal structure of afadin PDZ domain-nectin-3 complex shows the structural plasticity of the ligand-binding site.
Protein Sci., 24, 2015
3VMZ
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BU of 3vmz by Molmil
Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel (oxidation/H2O2)
Descriptor: Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
Deposit date:2011-12-19
Release date:2013-01-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Oxidation/H2O2)
To be Published
3VMY
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BU of 3vmy by Molmil
Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel (REDUCTION/DTT)
Descriptor: Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
Deposit date:2011-12-19
Release date:2013-01-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Reduction/Dtt)
To be Published
3VN0
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BU of 3vn0 by Molmil
Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel (mutation/C245S)
Descriptor: Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
Deposit date:2011-12-19
Release date:2013-01-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Mutation/C245S)
To be Published
3VYI
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BU of 3vyi by Molmil
Crystal Structure of a trimeric coiled-coil (I/I-type) assembly domain from the voltage-gated proton channel mutant
Descriptor: Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y, Takeshita, K, Nakagawa, A.
Deposit date:2012-09-25
Release date:2013-02-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.305 Å)
Cite:Gating of the designed trimeric/tetrameric voltage-gated H+ channel.
J.Physiol.(Paris), 591, 2013
4Z2M
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BU of 4z2m by Molmil
Crystal structure of human SPT16 Mid-AID/H3-H4 tetramer FACT Histone complex
Descriptor: FACT complex subunit SPT16, Histone H3.1, Histone H4
Authors:Tsunaka, Y, Fujiwara, Y, Oyama, T, Hirose, S, Morikawa, K.
Deposit date:2015-03-30
Release date:2016-03-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.981 Å)
Cite:Integrated molecular mechanism directing nucleosome reorganization by human FACT.
Genes Dev., 30, 2016
3DVJ
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BU of 3dvj by Molmil
Crystal Structure of Ca2+/CaM-CaV2.2 IQ domain (without cloning artifact, HM to TV) complex
Descriptor: CALCIUM ION, Calmodulin, Voltage-dependent N-type calcium channel subunit alpha-1B
Authors:Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
3DVE
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BU of 3dve by Molmil
Crystal Structure of Ca2+/CaM-CaV2.2 IQ domain complex
Descriptor: CALCIUM ION, Calmodulin, NICKEL (II) ION, ...
Authors:Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
3DVM
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BU of 3dvm by Molmil
Crystal Structure of Ca2+/CaM-CaV2.1 IQ domain complex
Descriptor: CALCIUM ION, Calmodulin, Voltage-dependent P/Q-type calcium channel subunit alpha-1A
Authors:Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
3DVK
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BU of 3dvk by Molmil
Crystal Structure of Ca2+/CaM-CaV2.3 IQ domain complex
Descriptor: CALCIUM ION, Calmodulin, Voltage-dependent R-type calcium channel subunit alpha-1E
Authors:Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
4Z2N
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BU of 4z2n by Molmil
Crystal structure of human FACT SPT16 middle domain
Descriptor: FACT complex subunit SPT16
Authors:Tsunaka, Y, Fujiwara, Y, Oyama, T, Hirose, S, Morikawa, K.
Deposit date:2015-03-30
Release date:2016-03-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.923 Å)
Cite:Integrated molecular mechanism directing nucleosome reorganization by human FACT.
Genes Dev., 30, 2016
1IXS
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BU of 1ixs by Molmil
Structure of RuvB complexed with RuvA domain III
Descriptor: Holliday junction DNA helicase ruvA, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RuvB
Authors:Yamada, K, Miyata, T, Tsuchiya, D, Oyama, T, Fujiwara, Y, Ohnishi, T, Iwasaki, H, Shinagawa, H, Ariyoshi, M, Mayanagi, K, Morikawa, K.
Deposit date:2002-07-04
Release date:2002-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of the RuvA-RuvB Complex: A Structural Basis for the Holliday Junction Migrating Motor Machinery
Mol.Cell, 10, 2002
1IXR
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BU of 1ixr by Molmil
RuvA-RuvB complex
Descriptor: Holliday junction DNA helicase ruvA, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RuvB
Authors:Yamada, K, Miyata, T, Tsuchiya, D, Oyama, T, Fujiwara, Y, Ohnishi, T, Iwasaki, H, Shinagawa, H, Ariyoshi, M, Mayanagi, K, Morikawa, K.
Deposit date:2002-07-04
Release date:2002-11-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of the RuvA-RuvB Complex: A Structural Basis for the Holliday Junction Migrating Motor Machinery
Mol.Cell, 10, 2002
3WKV
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BU of 3wkv by Molmil
Voltage-gated proton channel: VSOP/Hv1 chimeric channel
Descriptor: Ion channel
Authors:Takeshita, K, Sakata, S, Yamashita, E, Fujiwara, Y, Kawanabe, A, Kurokawa, T, Okochi, Y, Matsuda, M, Narita, H, Okamura, Y, Nakagawa, A.
Deposit date:2013-10-31
Release date:2014-03-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.453 Å)
Cite:X-ray crystal structure of voltage-gated proton channel.
Nat.Struct.Mol.Biol., 21, 2014
8YK6
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BU of 8yk6 by Molmil
Magnetic effects of thaumatin crystals; observation of the crystal growth of magneto-Archimedes levitation and magnetic orientation
Descriptor: L(+)-TARTARIC ACID, Thaumatin I
Authors:Nakabayashi, M, Inaka, K, Fujiwara, M, Hagiwara, M, Maki, S.
Deposit date:2024-03-04
Release date:2025-02-26
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Magnetic effects of thaumatin crystals; observation of crystal growth by magneto-Archimedes levitation and magnetic orientation.
Plos One, 20, 2025
7PL9
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BU of 7pl9 by Molmil
Cryo-EM structure of Bestrhodopsin (rhodopsin-rhodopsin-bestrophin) complex
Descriptor: RETINAL, Rhodopsin
Authors:Matzov, D, Kaczmarczyk, I, Shalev-Benami, M.
Deposit date:2021-08-29
Release date:2022-07-06
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Rhodopsin-bestrophin fusion proteins from unicellular algae form gigantic pentameric ion channels.
Nat.Struct.Mol.Biol., 29, 2022
6U9Q
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BU of 6u9q by Molmil
Crystal Structure Analysis of DNA-BCL11A Znf domain complex
Descriptor: B-cell lymphoma/leukemia 11A, DNA3, DNA5, ...
Authors:Seo, H.-S, Dhe-Paganon, S.
Deposit date:2019-09-09
Release date:2020-09-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural insights into the DNA-binding mechanism of BCL11A: The integral role of ZnF6
Structure, 2024
8THO
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BU of 8tho by Molmil
Solution structure of the zinc finger repeat domain of BCL11A (ZnF456)
Descriptor: B-cell lymphoma/leukemia 11A, ZINC ION
Authors:Viennet, T, Yin, M, Orkin, S.H, Arthanari, H.
Deposit date:2023-07-17
Release date:2024-07-24
Last modified:2025-02-05
Method:SOLUTION NMR
Cite:Structural insights into the DNA-binding mechanism of BCL11A: The integral role of ZnF6.
Structure, 32, 2024
8TLO
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BU of 8tlo by Molmil
Crystal Structure Analysis of BCL11A in complex with DNA
Descriptor: B-cell lymphoma/leukemia 11A, DNA (5'-D(P*CP*GP*AP*CP*CP*GP*CP*AP*TP*TP*GP*GP*TP*CP*AP*AP*GP*CP*G)-3'), DNA (5'-D(P*GP*CP*TP*TP*GP*AP*CP*CP*AP*AP*TP*GP*CP*GP*GP*TP*CP*GP*C)-3'), ...
Authors:Seo, H.-S, Dhe-Paganon, S.
Deposit date:2023-07-27
Release date:2024-08-14
Last modified:2024-12-18
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structural insights into the DNA-binding mechanism of BCL11A: The integral role of ZnF6.
Structure, 32, 2024
5H36
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BU of 5h36 by Molmil
Crystal structures of the TRIC trimeric intracellular cation channel orthologue from Rhodobacter sphaeroides
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Uncharacterized protein TRIC
Authors:Kasuya, G, Hiraizumi, M, Hattori, M, Nureki, O.
Deposit date:2016-10-20
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.409 Å)
Cite:Crystal structures of the TRIC trimeric intracellular cation channel orthologues
Cell Res., 26, 2016
5F1C
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BU of 5f1c by Molmil
Crystal structure of an invertebrate P2X receptor from the Gulf Coast tick in the presence of ATP and Zn2+ ion at 2.9 Angstroms
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Putative uncharacterized protein, ...
Authors:Kasuya, G, Hattori, M, Ishitani, R, Nureki, O.
Deposit date:2015-11-30
Release date:2016-03-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Insights into Divalent Cation Modulations of ATP-Gated P2X Receptor Channels
Cell Rep, 14, 2016
5WIR
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BU of 5wir by Molmil
Structure of the TRF1-TERB1 interface
Descriptor: TERB1-TBM, Telomeric repeat-binding factor 1
Authors:Nandakumar, J, Pendlebury, D.F, Smith, E.M, Tesmer, V.M.
Deposit date:2017-07-20
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dissecting the telomere-inner nuclear membrane interface formed in meiosis.
Nat. Struct. Mol. Biol., 24, 2017

 

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