5B3I | | HOMO-DIMERIC STRUCTURE OF CYTOCHROME C' FROM THERMOPHILIC HYDROGENOPHILUS THERMOLUTEOLUS | | Descriptor: | Cytochrome c prime, HEME C | | Authors: | Fujii, S., Oki, H., Kawahara, K., Yamane, D., Yamanaka, M., Maruno, T., Kobayashi, Y., Masanari, M., Wakai, S., Nishihara, H., Ohkubo, T., Sambongi, Y. | | Deposit date: | 2016-02-29 | | Release date: | 2017-03-01 | | Last modified: | 2019-10-02 | | Method: | X-RAY DIFFRACTION (1.89 Å) | | Cite: | Structural and functional insights into thermally stable cytochrome c' from a thermophile
Protein Sci., 26, 2017
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1VTV | | MOLECULAR STRUCTURE OF (M5DC-DG)3: THE ROLE OF THE METHYL GROUP ON 5-METHYL CYTOSINE IN STABILIZING Z-DNA | | Descriptor: | DNA (5'-D(*(CH3)CP*GP*(CH3)CP*GP*(CH3)CP*G)-3') | | Authors: | Fujii, S., Wang, A.H.-J., Van Der Marel, G.A., Van Boom, J.H., Rich, A. | | Deposit date: | 1989-01-10 | | Release date: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.3 Å) | | Cite: | Molecular Structure of (m5dC-dG)3: The Role of the Methyl Group on 5-Methyl Cytosine in Stabilizing Z-DNA
Nucleic Acids Res., 10, 1982
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3VJS | | VITAMIN D RECEPTOR COMPLEX WITH A CARBORANE COMPOUND | | Descriptor: | Vitamin D3 receptor, peptide from Mediator of RNA polymerase II transcription subunit 1, 1-(2-[(S)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane | | Authors: | Fujii, S., Masuno, M., Kagechika, H., Nakabayashi, M., Ito, N. | | Deposit date: | 2011-10-31 | | Release date: | 2012-02-08 | | Method: | X-RAY DIFFRACTION (1.93 Å) | | Cite: | Boron Cluster-based Development of Potent Nonsecosteroidal Vitamin D Receptor Ligands: Direct Observation of Hydrophobic Interaction between Protein Surface and Carborane
J.Am.Chem.Soc., 133, 2011
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3VJT | | VITAMIN D RECEPTOR COMPLEX WITH A CARBORANE COMPOUND | | Descriptor: | Vitamin D3 receptor, peptide from Mediator of RNA polymerase II transcription subunit 1, 1-(2-[(R)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane | | Authors: | Fujii, S., Masuno, M., Kagechika, H., Nakabayashi, M., Ito, N. | | Deposit date: | 2011-10-31 | | Release date: | 2012-02-08 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Boron Cluster-based Development of Potent Nonsecosteroidal Vitamin D Receptor Ligands: Direct Observation of Hydrophobic Interaction between Protein Surface and Carborane
J.Am.Chem.Soc., 133, 2011
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1B5U | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME: CALORIMETRY AND X-RAY ANALYSIS OF SIX SER->ALA MUTANT | | Descriptor: | PROTEIN (LYSOZYME), SODIUM ION | | Authors: | Takano, K., Yamagata, Y., Kubota, M., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1999-01-11 | | Release date: | 1999-01-20 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six Ser --> Ala mutants.
Biochemistry, 38, 1999
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1B5V | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME: CALORIMETRY AND X-RAY ANALYSIS OF SIX SER->ALA MUTANTS | | Descriptor: | PROTEIN (LYSOZYME), SODIUM ION, CHLORIDE ION | | Authors: | Takano, K., Yamagata, Y., Kubota, M., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1999-01-11 | | Release date: | 1999-01-20 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.17 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six Ser --> Ala mutants.
Biochemistry, 38, 1999
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1B5W | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME: CALORIMETRY AND X-RAY ANALYSIS OF SIX SER->ALA MUTANTS | | Descriptor: | PROTEIN (LYSOZYME), CHLORIDE ION, SODIUM ION | | Authors: | Takano, K., Yamagata, Y., Kubota, M., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1999-01-11 | | Release date: | 1999-01-20 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.17 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six Ser --> Ala mutants.
Biochemistry, 38, 1999
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1B5X | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME: CALORIMETRY AND X-RAY ANALYSIS OF SIX SER->ALA MUTANTS | | Descriptor: | PROTEIN (LYSOZYME), SODIUM ION | | Authors: | Takano, K., Yamagata, Y., Kubota, M., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1999-01-11 | | Release date: | 1999-01-20 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six Ser --> Ala mutants.
Biochemistry, 38, 1999
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1B5Y | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME: CALORIMETRY AND X-RAY ANALYSIS OF SIX SER->ALA MUTANTS | | Descriptor: | PROTEIN (LYSOZYME), SODIUM ION | | Authors: | Takano, K., Yamagata, Y., Kubota, M., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1999-01-11 | | Release date: | 1999-01-20 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six Ser --> Ala mutants.
Biochemistry, 38, 1999
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1B5Z | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME: CALORIMETRY AND X-RAY ANALYSIS OF SIX SER->ALA MUTANTS | | Descriptor: | LYSOZYME | | Authors: | Takano, K., Yamagata, Y., Kubota, M., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1999-01-11 | | Release date: | 1999-02-02 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six Ser --> Ala mutants.
Biochemistry, 38, 1999
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1WQM | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME | | Descriptor: | LYSOZYME, SODIUM ION, CHLORIDE ION | | Authors: | Yamagata, Y., Kubota, M., Sumikawa, Y., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1998-02-09 | | Release date: | 1998-07-01 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
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1WQN | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME | | Descriptor: | LYSOZYME, SODIUM ION, CHLORIDE ION | | Authors: | Yamagata, Y., Kubota, M., Sumikawa, Y., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1998-02-09 | | Release date: | 1998-07-01 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
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1WQO | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME | | Descriptor: | LYSOZYME, SODIUM ION, CHLORIDE ION | | Authors: | Yamagata, Y., Kubota, M., Sumikawa, Y., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1998-02-09 | | Release date: | 1998-07-01 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
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1WQP | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME | | Descriptor: | LYSOZYME, SODIUM ION, CHLORIDE ION | | Authors: | Yamagata, Y., Kubota, M., Sumikawa, Y., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1998-02-09 | | Release date: | 1998-07-01 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
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1WQQ | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME | | Descriptor: | LYSOZYME, SODIUM ION, CHLORIDE ION | | Authors: | Yamagata, Y., Kubota, M., Sumikawa, Y., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1998-02-09 | | Release date: | 1998-07-01 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
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1WQR | | CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME | | Descriptor: | LYSOZYME, SODIUM ION, CHLORIDE ION | | Authors: | Yamagata, Y., Kubota, M., Sumikawa, Y., Funahashi, J., Fujii, S., Yutani, K. | | Deposit date: | 1998-02-09 | | Release date: | 1998-07-01 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six tyrosine --> phenylalanine mutants.
Biochemistry, 37, 1998
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413D | | A'-FORM RNA DOUBLE HELIX IN THE SINGLE CRYSTAL STRUCTURE OF R(UGAGCUUCGGCUC) | | Descriptor: | RNA (5'-R(*UP*GP*AP*GP*CP*UP*UP*CP*GP*GP*CP*UP*C)-3') | | Authors: | Tanaka, Y., Fujii, S., Hiroaki, H., Sakata, T., Tanaka, T., Uesugi, S., Tomita, K.-I., Kyogoku, Y. | | Deposit date: | 1998-07-10 | | Release date: | 1998-07-10 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | A'-form RNA double helix in the single crystal structure of r(UGAGCUUCGGCUC).
Nucleic Acids Res., 27, 1999
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2HEA | | CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY | | Descriptor: | LYSOZYME, SODIUM ION | | Authors: | Takano, K., Funahashi, J., Yamagata, Y., Fujii, S., Yutani, K. | | Deposit date: | 1997-09-16 | | Release date: | 1998-01-14 | | Last modified: | 2017-11-29 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
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2HEB | | CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY | | Descriptor: | LYSOZYME, SODIUM ION | | Authors: | Takano, K., Funahashi, J., Yamagata, Y., Fujii, S., Yutani, K. | | Deposit date: | 1997-09-16 | | Release date: | 1998-01-28 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
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2HEC | | CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY | | Descriptor: | LYSOZYME, SODIUM ION | | Authors: | Takano, K., Funahashi, J., Yamagata, Y., Fujii, S., Yutani, K. | | Deposit date: | 1997-09-16 | | Release date: | 1998-01-14 | | Last modified: | 2017-11-29 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
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2HED | | CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY | | Descriptor: | LYSOZYME, SODIUM ION | | Authors: | Takano, K., Funahashi, J., Yamagata, Y., Fujii, S., Yutani, K. | | Deposit date: | 1997-09-16 | | Release date: | 1998-01-14 | | Last modified: | 2017-11-29 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
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2HEE | | CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY | | Descriptor: | LYSOZYME, SODIUM ION | | Authors: | Takano, K., Funahashi, J., Yamagata, Y., Fujii, S., Yutani, K. | | Deposit date: | 1997-09-16 | | Release date: | 1998-01-14 | | Last modified: | 2017-11-29 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
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2HEF | | CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY | | Descriptor: | LYSOZYME, SODIUM ION | | Authors: | Takano, K., Funahashi, J., Yamagata, Y., Fujii, S., Yutani, K. | | Deposit date: | 1997-09-16 | | Release date: | 1998-01-14 | | Last modified: | 2017-11-29 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
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3VIV | | 1510-N MEMBRANE-BOUND STOMATIN-SPECIFIC PROTEASE K138A MUTANT IN COMPLEX WITH A SUBSTRATE PEPTIDE | | Descriptor: | 441aa long hypothetical nfeD protein, PH STOMATIN PH1511, GLYCEROL, ... | | Authors: | Yokoyama, H., Matsui, I., Fujii, S. | | Deposit date: | 2011-10-12 | | Release date: | 2012-05-23 | | Last modified: | 2017-11-22 | | Method: | X-RAY DIFFRACTION (2.25 Å) | | Cite: | Crystal structure of a membrane stomatin-specific protease in complex with a substrate Peptide
Biochemistry, 51, 2012
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1OUB | | CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: X-RAY STRUCTURE OF THE V100A MUTANT | | Descriptor: | LYSOZYME, SODIUM ION | | Authors: | Takano, K., Yamagata, Y., Fujii, S., Yutani, K. | | Deposit date: | 1996-08-23 | | Release date: | 1997-02-12 | | Last modified: | 2017-11-29 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Contribution of the hydrophobic effect to the stability of human lysozyme: calorimetric studies and X-ray structural analyses of the nine valine to alanine mutants.
Biochemistry, 36, 1997
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