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1ZNT
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BU of 1znt by Molmil
18 NMR structures of AcAMP2-Like Peptide with non Natural Fluoroaromatic Residue (AcAMP2F18Pff/Y20Pff) complex with N,N,N-triacetylchitotriose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AMARANTHUS CAUDATUS ANTIMICROBIAL PEPTIDE 2
Authors:Chavez, M.I, Andreu, C, Vidal, P, Aboitiz, N, Freire, F, Groves, P, Asensio, J.L, Asensio, G, Muraki, M, Canada, F.J, Jimenez-Barbero, J.
Deposit date:2005-05-12
Release date:2005-12-06
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:On the Importance of Carbohydrate-Aromatic Interactions for the Molecular Recognition of Oligosaccharides by Proteins: NMR Studies of the Structure and Binding Affinity of AcAMP2-like Peptides with Non-Natural Naphthyl and Fluoroaromatic Residues
Chemistry, 11, 2005
1ZWU
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BU of 1zwu by Molmil
30 NMR structures of AcAMP2-like peptide with non natural beta-(2-naphthyl)-alanine residue.
Descriptor: AMARANTHUS CAUDATUS ANTIMICROBIAL PEPTIDE 2 (ACMP2)
Authors:Chavez, M.I, Andreu, C, Vidal, P, Freire, F, Aboitiz, N, Groves, P, Asensio, J.L, Asensio, G, Muraki, M, Canada, F.J, Jimenez-Barbero, J.
Deposit date:2005-06-06
Release date:2005-12-06
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:On the Importance of Carbohydrate-Aromatic Interactions for the Molecular Recognition of Oligosaccharides by Proteins: NMR Studies of the Structure and Binding Affinity of AcAMP2-like Peptides with Non-Natural Naphthyl and Fluoroaromatic Residues.
Chemistry, 11, 2005
1T0W
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BU of 1t0w by Molmil
25 NMR structures of Truncated Hevein of 32 aa (Hevein-32) complex with N,N,N-triacetylglucosamina
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hevein
Authors:Aboitiz, N, Vila-Perello, M, Groves, P, Asensio, J.L, Andreu, D, Canada, F.J, Jimenez-Barbero, J.
Deposit date:2004-04-13
Release date:2004-09-28
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:NMR and modeling studies of protein-carbohydrate interactions: synthesis, three-dimensional structure, and recognition properties of a minimum hevein domain with binding affinity for chitooligosaccharides
Chembiochem, 5, 2004
1ZUV
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BU of 1zuv by Molmil
24 NMR structures of AcAMP2-Like Peptide with Phenylalanine 18 mutated to Tryptophan
Descriptor: AMARANTHUS CAUDATUS ANTIMICROBIAL PEPTIDE 2
Authors:Chavez, M.I, Andreu, C, Vidal, P, Freire, F, Aboitiz, N, Groves, P, Asensio, J.L, Asensio, G, Muraki, M, Canada, F.J, Jimenez-Barbero, J.
Deposit date:2005-06-01
Release date:2005-12-06
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:On the Importance of Carbohydrate-Aromatic Interactions for the Molecular Recognition of Oligosaccharides by Proteins: NMR Studies of the Structure and Binding Affinity of AcAMP2-like Peptides with Non-Natural Naphthyl and Fluoroaromatic Residues
Chemistry, 11, 2005
6TEY
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BU of 6tey by Molmil
Solution Structure of the DNA-binding TubR fragment from Clostridium Botulinum
Descriptor: DNA-binding protein TubR
Authors:Valverde, P, Canada, F.J, Jimenez-Barbero, J, Oliva, M.A.
Deposit date:2019-11-12
Release date:2020-11-18
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of TubR protein fragment from Clostridium Botulinum's phage c-st
To Be Published
3ZPF
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BU of 3zpf by Molmil
Structure of the carboxy-terminal domain of the turkey type 3 siadenovirus fibre
Descriptor: FIBER, PHOSPHATE ION
Authors:Singh, A.K, van Raaij, M.J.
Deposit date:2013-02-27
Release date:2014-03-12
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Sialyllactose Binding of the Carboxy-Terminal Head Domain of the Fibre from a Siadenovirus, Turkey Adenovirus 3.
PLoS ONE, 10, 2015
2Z1S
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BU of 2z1s by Molmil
Beta-glucosidase B from paenibacillus polymyxa complexed with cellotetraose
Descriptor: Beta-glucosidase B, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Isorna, P, Sanz-Aparicio, J.
Deposit date:2007-05-12
Release date:2007-10-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Crystal Structures of Paenibacillus polymyxa beta-Glucosidase B Complexes Reveal the Molecular Basis of Substrate Specificity and Give New Insights into the Catalytic Machinery of Family I Glycosidases
J.Mol.Biol., 371, 2007
3LSD
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BU of 3lsd by Molmil
N-Domain of human adhesion/growth-regulatory galectin-9
Descriptor: Galectin-9
Authors:Ruiz, F.M, Romero, A.
Deposit date:2010-02-12
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:N-domain of human adhesion/growth-regulatory galectin-9: preference for distinct conformers and non-sialylated N-glycans and detection of ligand-induced structural changes in crystal and solution.
Int.J.Biochem.Cell Biol., 42, 2010
3LSE
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BU of 3lse by Molmil
N-Domain of human adhesion/growth-regulatory galectin-9 in complex with lactose
Descriptor: Galectin-9, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Ruiz, F.M, Romero, A.
Deposit date:2010-02-12
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:N-domain of human adhesion/growth-regulatory galectin-9: preference for distinct conformers and non-sialylated N-glycans and detection of ligand-induced structural changes in crystal and solution.
Int.J.Biochem.Cell Biol., 42, 2010
2JIE
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BU of 2jie by Molmil
BETA-GLUCOSIDASE B FROM BACILLUS POLYMYXA COMPLEXED WITH 2-F-GLUCOSE
Descriptor: 2-deoxy-2-fluoro-alpha-D-glucopyranose, BETA-GLUCOSIDASE B
Authors:Isorna, P, Polaina, J, Sanz-Aparicio, J.
Deposit date:2007-02-28
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Paenibacillus Polymyxa Beta-Glucosidase B Complexes Reveal the Molecular Basis of Substrate Specificity and Give New Insights Into the Catalytic Machinery of Family I Glycosidases.
J.Mol.Biol., 371, 2007
2O9P
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BU of 2o9p by Molmil
beta-glucosidase B from Paenibacillus polymyxa
Descriptor: Beta-glucosidase B
Authors:Isorna, P, Polaina, J, Sanz-Aparicio, J.
Deposit date:2006-12-14
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Paenibacillus polymyxa beta-Glucosidase B Complexes Reveal the Molecular Basis of Substrate Specificity and Give New Insights into the Catalytic Machinery of Family I Glycosidases
J.Mol.Biol., 371, 2007
2O9R
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BU of 2o9r by Molmil
beta-glucosidase B complexed with thiocellobiose
Descriptor: Beta-glucosidase B, beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose
Authors:Isorna, P, Polaina, J, Sanz-Aparicio, J.
Deposit date:2006-12-14
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Paenibacillus polymyxa beta-Glucosidase B Complexes Reveal the Molecular Basis of Substrate Specificity and Give New Insights into the Catalytic Machinery of Family I Glycosidases
J.Mol.Biol., 371, 2007
2O9T
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BU of 2o9t by Molmil
beta-glucosidase B from Bacillus polymyxa complexed with glucose
Descriptor: Beta-glucosidase B, beta-D-glucopyranose
Authors:Isorna, P, Polaina, J, Sanz-Aparicio, J.
Deposit date:2006-12-14
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structures of Paenibacillus polymyxa beta-Glucosidase B Complexes Reveal the Molecular Basis of Substrate Specificity and Give New Insights into the Catalytic Machinery of Family I Glycosidases
J.Mol.Biol., 371, 2007
3ZPE
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BU of 3zpe by Molmil
Structure of the carboxy-terminal domain of the turkey type 3 siadenovirus fibre
Descriptor: FIBER, PHOSPHATE ION
Authors:Singh, A.K, van Raaij, M.J.
Deposit date:2013-02-27
Release date:2014-03-12
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Sialyllactose Binding of the Carboxy-Terminal Head Domain of the Fibre from a Siadenovirus, Turkey Adenovirus 3.
PLoS ONE, 10, 2015
4D63
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BU of 4d63 by Molmil
Structure of the carboxy-terminal domain of the turkey type 3 siadenovirus fibre, avirulent form complexed with 6-sialyllactose.
Descriptor: FIBER KNOB DOMAIN, N-acetyl-alpha-neuraminic acid
Authors:Singh, A.K, van Raaij, M.J.
Deposit date:2014-11-08
Release date:2015-10-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Sialyllactose Binding of the Carboxy-Terminal Head Domain of the Fibre from a Siadenovirus, Turkey Adenovirus 3.
PLoS ONE, 10, 2015
4CW8
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BU of 4cw8 by Molmil
Structure of the carboxy-terminal domain of the turkey type 3 siadenovirus fibre, virulent form
Descriptor: FIBER KNOB DOMAIN, PHOSPHATE ION
Authors:Singh, A.K, van Raaij, M.J.
Deposit date:2014-04-01
Release date:2015-04-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Sialyllactose Binding of the Carboxy-Terminal Head Domain of the Fibre from a Siadenovirus, Turkey Adenovirus 3.
PLoS ONE, 10, 2015
4D62
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BU of 4d62 by Molmil
Structure of the carboxy-terminal domain of the turkey type 3 siadenovirus fibre, avirulent form complexed with 3-sialyllactose.
Descriptor: FIBER KNOB DOMAIN, N-acetyl-alpha-neuraminic acid
Authors:Singh, A.K, van Raaij, M.J.
Deposit date:2014-11-08
Release date:2015-10-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and Sialyllactose Binding of the Carboxy-Terminal Head Domain of the Fibre from a Siadenovirus, Turkey Adenovirus 3.
PLoS ONE, 10, 2015
1E4I
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BU of 1e4i by Molmil
2-deoxy-2-fluoro-beta-D-glucosyl/enzyme intermediate complex of the beta-glucosidase from Bacillus polymyxa
Descriptor: 2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-glucopyranoside, 2-deoxy-2-fluoro-alpha-D-glucopyranose, BETA-GLUCOSIDASE
Authors:Sanz-Aparicio, J, Gonzalez, B, Hermoso, J.A, Arribas, J.C, Canada, F.J, Polaina, J.
Deposit date:2000-07-06
Release date:2001-07-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Increased Resistance to Thermal Denaturation Induced by Single Amino Acid Substitution in the Sequence of Beta-Glucosidase a from Bacillus Polymyxa.
Proteins: Struct.,Funct., Genet., 33, 1998
2WKS
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BU of 2wks by Molmil
Structure of Helicobacter pylori Type II Dehydroquinase with a new carbasugar-thiophene inhibitor.
Descriptor: (1R,4S,5R)-1,4,5-trihydroxy-3-[(5-methyl-1-benzothiophen-2-yl)methoxy]cyclohex-2-ene-1-carboxylic acid, 3-DEHYDROQUINATE DEHYDRATASE
Authors:Otero, J.M, Guardado-Calvo, P, Llamas-Saiz, A.L, Prazeres, V.F.V, Tizon, L, Castedo, L, Lamb, H, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2009-06-17
Release date:2009-11-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Synthesis and biological evaluation of new nanomolar competitive inhibitors of Helicobacter pylori type II dehydroquinase. Structural details of the role of the aromatic moieties with essential residues.
J. Med. Chem., 53, 2010
6QI4
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BU of 6qi4 by Molmil
NCS-1 bound to a ligand
Descriptor: 2-(1~{H}-indol-3-yl)-~{N}-[(~{E})-(4-nitro-3-oxidanyl-phenyl)methylideneamino]ethanamide, ACETATE ION, CALCIUM ION, ...
Authors:Sanchez-Barrena, M.J, Blanco-Gabella, P.
Deposit date:2019-01-17
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Insights into real-time chemical processes in a calcium sensor protein-directed dynamic library.
Nat Commun, 10, 2019
6XIY
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BU of 6xiy by Molmil
Crystal Structure of the Carbohydrate Recognition Domain of the Human Macrophage Galactose C-Type Lectin Bound to methyl 2-(acetylamino)-2-deoxy-1-thio-alpha-D-galactopyranose
Descriptor: C-type lectin domain family 10 member A, CALCIUM ION, CHLORIDE ION, ...
Authors:Birrane, G, Murphy, P.V, Gabba, A, Luz, J.G.
Deposit date:2020-06-22
Release date:2021-03-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.307 Å)
Cite:Crystal Structure of the Carbohydrate Recognition Domain of the Human Macrophage Galactose C-Type Lectin Bound to GalNAc and the Tumor-Associated Tn Antigen.
Biochemistry, 60, 2021
6HX0
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BU of 6hx0 by Molmil
Cell wall binding domain of endolysin from Listeria phage A500.
Descriptor: L-alanyl-D-glutamate peptidase
Authors:Dunne, M, Taylor, N.M.I, Shen, Y, Loessner, M.J, Leiman, P.G.
Deposit date:2018-10-15
Release date:2019-10-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural basis for recognition of bacterial cell wall teichoic acid by pseudo-symmetric SH3b-like repeats of a viral peptidoglycan hydrolase
Chem Sci, 2020
8TJ6
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BU of 8tj6 by Molmil
CRYSTAL STRUCTURE OF THE A/Beijing/353/1989(H3N2) INFLUENZA VIRUS HEMAGGLUTININ WITH HUMAN RECEPTOR ANALOG 6'-SLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wu, N.C, Zhu, X, Wilson, I.A.
Deposit date:2023-07-20
Release date:2024-02-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Evolution of human H3N2 influenza virus receptor specificity has substantially expanded the receptor-binding domain site.
Cell Host Microbe, 32, 2024
8TJ9
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BU of 8tj9 by Molmil
CRYSTAL STRUCTURE OF THE A/Michigan/15/2014(H3N2) INFLUENZA VIRUS HEMAGGLUTININ WITH HUMAN RECEPTOR ANALOG 6'-SLNLN
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Wu, N.C, Zhu, X, Wilson, I.A.
Deposit date:2023-07-20
Release date:2024-02-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evolution of human H3N2 influenza virus receptor specificity has substantially expanded the receptor-binding domain site.
Cell Host Microbe, 32, 2024
8TJB
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BU of 8tjb by Molmil
CRYSTAL STRUCTURE OF THE A/Texas/73/2017(H3N2) INFLUENZA VIRUS HEMAGGLUTININ WITH HUMAN RECEPTOR ANALOG 6'-SLNLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
Authors:Wu, N.C, Zhu, X, Wilson, I.A.
Deposit date:2023-07-20
Release date:2024-02-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Evolution of human H3N2 influenza virus receptor specificity has substantially expanded the receptor-binding domain site.
Cell Host Microbe, 32, 2024

 

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