Author results

2JPH
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NMR SOLUTION STRUCTURE OF THE RHO GTPASE BINDING DOMAIN OF HUMAN PLEXIN-B1
Descriptor:Plexin-B1
Authors:Tong, Y., Buck, M.
Deposit date:2007-05-11
Release date:2008-03-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Insights into Oncogenic Mutations of Plexin-B1 Based on the Solution Structure of the Rho GTPase Binding Domain
Structure, 16, 2008
2BJV
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CRYSTAL STRUCTURE OF PSPF(1-275) R168A MUTANT
Descriptor:PSP OPERON TRANSCRIPTIONAL ACTIVATOR
Authors:Rappas, M., Schumacher, J., Beuron, F., Niwa, H., Bordes, P., Wigneshweraraj, S., Keetch, C.A., Robinson, C.V., Buck, M., Zhang, X.
Deposit date:2005-02-08
Release date:2005-03-31
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Insights Into the Activity of Enhancer-Binding Proteins
Science, 307, 2005
2BJW
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PSPF AAA DOMAIN
Descriptor:PSP OPERON TRANSCRIPTIONAL ACTIVATOR
Authors:Rappas, M., Schumacher, J., Beuron, F., Niwa, H., Bordes, P., Wigneshweraraj, S., Keetch, C.A., Robinson, C.V., Buck, M., Zhang, X.
Deposit date:2005-02-08
Release date:2005-03-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Insights Into the Activity of Enhancer-Binding Proteins
Science, 307, 2005
2C96
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STRUCTURAL BASIS OF THE NUCLEOTIDE DRIVEN CONFORMATIONAL CHANGES IN THE AAA DOMAIN OF TRANSCRIPTION ACTIVATOR PSPF
Descriptor:PSP OPERON TRANSCRIPTIONAL ACTIVATOR, ADENOSINE-5'-TRIPHOSPHATE
Authors:Rappas, M., Schumacher, J., Niwa, H., Buck, M., Zhang, X.
Deposit date:2005-12-09
Release date:2006-02-01
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of the Nucleotide Driven Conformational Changes in the Aaa(+) Domain of Transcription Activator Pspf.
J.Mol.Biol., 357, 2006
2C98
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STRUCTURAL BASIS OF THE NUCLEOTIDE DRIVEN CONFORMATIONAL CHANGES IN THE AAA DOMAIN OF TRANSCRIPTION ACTIVATOR PSPF
Descriptor:PSP OPERON TRANSCRIPTIONAL ACTIVATOR, ADENOSINE-5'-DIPHOSPHATE
Authors:Rappas, M., Schumacher, J., Niwa, H., Buck, M., Zhang, X.
Deposit date:2005-12-09
Release date:2006-02-01
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of the Nucleotide Driven Conformational Changes in the Aaa(+) Domain of Transcription Activator Pspf.
J.Mol.Biol., 357, 2006
2C99
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STRUCTURAL BASIS OF THE NUCLEOTIDE DRIVEN CONFORMATIONAL CHANGES IN THE AAA DOMAIN OF TRANSCRIPTION ACTIVATOR PSPF
Descriptor:PSP OPERON TRANSCRIPTIONAL ACTIVATOR, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Rappas, M., Schumacher, J., Niwa, H., Buck, M., Zhang, X.
Deposit date:2005-12-09
Release date:2006-02-01
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of the Nucleotide Driven Conformational Changes in the Aaa(+) Domain of Transcription Activator Pspf.
J.Mol.Biol., 357, 2006
2C9C
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STRUCTURAL BASIS OF THE NUCLEOTIDE DRIVEN CONFORMATIONAL CHANGES IN THE AAA DOMAIN OF TRANSCRIPTION ACTIVATOR PSPF
Descriptor:PSP OPERON TRANSCRIPTIONAL ACTIVATOR, MAGNESIUM ION, ADENOSINE-5'-TRIPHOSPHATE
Authors:Rappas, M., Schumacher, J., Niwa, H., Buck, M., Zhang, X.
Deposit date:2005-12-09
Release date:2006-02-01
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis of the Nucleotide Driven Conformational Changes in the Aaa(+) Domain of Transcription Activator Pspf.
J.Mol.Biol., 357, 2006
2VII
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PSPF1-275-MG-AMP
Descriptor:PSP OPERON TRANSCRIPTIONAL ACTIVATOR, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION
Authors:Joly, N., Rappas, M., Buck, M., Zhang, X.
Deposit date:2007-12-04
Release date:2008-01-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Trapping of a Transcription Complex Using a New Nucleotide Analogue: AMP Aluminium Fluoride
J.Mol.Biol., 375, 2008
3CXL
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CRYSTAL STRUCTURE OF HUMAN CHIMERIN 1 (CHN1)
Descriptor:N-chimerin, ZINC ION, UNKNOWN ATOM OR ION
Authors:Shen, L., Buck, M., Tong, Y., Tempel, W., MacKenzie, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Wilkstrom, M., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
Deposit date:2008-04-24
Release date:2008-08-05
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of human chimerin 1 (CHN1).
To be Published
3HEI
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LIGAND RECOGNITION BY A-CLASS EPH RECEPTORS: CRYSTAL STRUCTURES OF THE EPHA2 LIGAND-BINDING DOMAIN AND THE EPHA2/EPHRIN-A1 COMPLEX
Descriptor:Ephrin type-A receptor 2, Ephrin-A1
Authors:Himanen, J.P., Goldgur, Y., Miao, H., Myshkin, E., Guo, H., Buck, M., Nguyen, M., Rajashankar, K.R., Wang, B., Nikolov, D.B.
Deposit date:2009-05-08
Release date:2009-06-30
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand recognition by A-class Eph receptors: crystal structures of the EphA2 ligand-binding domain and the EphA2/ephrin-A1 complex.
Embo Rep., 10, 2009
3HPN
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LIGAND RECOGNITION BY A-CLASS EPH RECEPTORS: CRYSTAL STRUCTURES OF THE EPHA2 LIGAND-BINDING DOMAIN AND THE EPHA2/EPHRIN-A1 COMPLEX
Descriptor:Ephrin type-A receptor 2
Authors:Himanen, J.P., Goldgur, Y., Miao, H., Myshkin, E., Guo, H., Buck, M., Nguyen, M., Rajashankar, K.R., Wang, B., Nikolov, D.B.
Deposit date:2009-06-04
Release date:2009-06-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Ligand recognition by A-class Eph receptors: crystal structures of the EphA2 ligand-binding domain and the EphA2/ephrin-A1 complex.
Embo Rep., 10, 2009
1E8L
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NMR SOLUTION STRUCTURE OF HEN LYSOZYME
Descriptor:LYSOZYME
Authors:Schwalbe, H., Grimshaw, S.B., Spencer, A., Buck, M., Boyd, J., Dobson, C.M., Redfield, C., Smith, L.J.
Deposit date:2000-09-27
Release date:2000-10-09
Last modified:2018-01-24
Method:SOLUTION NMR
Cite:A refined solution structure of hen lysozyme determined using residual dipolar coupling data.
Protein Sci., 10, 2001
1HWU
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STRUCTURE OF PII PROTEIN FROM HERBASPIRILLUM SEROPEDICAE
Descriptor:PII PROTEIN
Authors:Benelli, E.M., Buck, M., Polikarpov, I., De Souza, E.M., Cruz, L.M., Pedrosa, F.O.
Deposit date:2001-01-10
Release date:2003-06-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Herbaspirillum seropedicae signal transduction protein PII is structurally similar to the enteric GlnK.
Eur.J.Biochem., 269, 2002
2KSO
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EPHA2:SHIP2 SAM:SAM COMPLEX
Descriptor:Ephrin type-A receptor 2, Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2
Authors:Hota, P.K., Preeti, C., Stetzik, L., Kim, S., Wang, B., Lee, H., Buck, M.
Deposit date:2010-01-10
Release date:2011-07-27
Method:SOLUTION NMR
Cite:Structure and function of the EphA2:SHIP2 SAM domain heterodimer
To be Published
362D
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THE STRUCTURE OF D(TGCGCA)2 AND A COMPARISON TO OTHER Z-DNA HEXAMERS
Descriptor:DNA (5'-D(*TP*GP*CP*GP*CP*A)-3'), COBALT HEXAMMINE(III)
Authors:Harper, N.A., Brannigan, J.A., Buck, M., Lewis, R.J., Moore, M.H., Schneider, B.
Deposit date:1997-08-20
Release date:1997-11-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of d(TGCGCA)2 and a comparison to other DNA hexamers.
Acta Crystallogr.,Sect.D, 54, 1998
3H6N
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CRYSTAL STRUCTURE OF THE UBIQUITIN-LIKE DOMAIN OF PLEXIN D1
Descriptor:Plexin-D1, ARSENIC, UNKNOWN ATOM OR ION
Authors:Tong, Y., Nedyalkova, L., Tempel, W., MacKenzie, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Buck, M., Park, H., Structural Genomics Consortium (SGC)
Deposit date:2009-04-23
Release date:2009-05-19
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Crystal Structure of the ubiquitin-like domain of plexin D1
To be Published
3KUZ
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CRYSTAL STRUCTURE OF THE UBIQUITIN LIKE DOMAIN OF PLXNC1
Descriptor:Plexin-C1, UNKNOWN ATOM OR ION
Authors:Wang, H., Li, B., Tempel, W., Tong, Y., Guan, X., Zhong, N., Crombet, L., MacKenzie, F., Buck, M., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
Deposit date:2009-11-28
Release date:2009-12-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the ubiquitin like domain of PLXNC1
to be published
4QNM
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CRYSTAL STRUCTURE OF PSPF(1-265) E108Q MUTANT
Descriptor:Psp operon transcriptional activator, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL
Authors:Darbari, V.C., Lawton, E., Lu, D., Burrows, P.C., Wiesler, S., Joly, N., Zhang, N., Zhang, X., Buck, M.
Deposit date:2014-06-18
Release date:2014-08-06
Last modified:2014-09-03
Method:X-RAY DIFFRACTION (1.628 Å)
Cite:Molecular basis of nucleotide-dependent substrate engagement and remodeling by an AAA+ activator.
Nucleic Acids Res., 42, 2014
4QNR
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CRYSTAL STRUCTURE OF PSPF(1-265) E108Q MUTANT BOUND TO ATP
Descriptor:Psp operon transcriptional activator, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Darbari, V.C., Lawton, E., Lu, D., Burrows, P.C., Wiesler, S., Joly, N., Zhang, N., Zhang, X., Buck, M.
Deposit date:2014-06-18
Release date:2014-08-06
Last modified:2014-09-03
Method:X-RAY DIFFRACTION (1.539 Å)
Cite:Molecular basis of nucleotide-dependent substrate engagement and remodeling by an AAA+ activator.
Nucleic Acids Res., 42, 2014
4QOS
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CRYSTAL STRUCTURE OF PSPF(1-265) E108Q MUTANT BOUND TO ADP
Descriptor:Psp operon transcriptional activator, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Darbari, V.C., Lawton, E., Lu, D., Burrows, P.C., Wiesler, S., Joly, N., Zhang, N., Zhang, X., Buck, M.
Deposit date:2014-06-20
Release date:2014-08-06
Last modified:2014-09-03
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Molecular basis of nucleotide-dependent substrate engagement and remodeling by an AAA+ activator.
Nucleic Acids Res., 42, 2014
5BYH
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI RNA POLYMERASE - SIGMA54 HOLOENZYME COMPLEX
Descriptor:DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhang, X., Buck, M., Darbari, V.C., Yang, Y., Zhang, N., Lu, D., Glyde, R., Wang, Y., Winkelman, J., Gourse, R.L., Murakami, K.S.
Deposit date:2015-06-10
Release date:2015-09-02
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (3.76 Å)
Cite:TRANSCRIPTION. Structures of the RNA polymerase-sigma 54 reveal new and conserved regulatory strategies.
Science, 349, 2015
5EZK
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RNA POLYMERASE MODEL PLACED BY MOLECULAR REPLACEMENT INTO X-RAY DIFFRACTION MAP OF DNA-BOUND RNA POLYMERASE-SIGMA 54 HOLOENZYME COMPLEX.
Descriptor:DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Darbari, V.C., Yang, Y., Lu, D., Zhang, N., Glyde, R., Wang, Y., Murakami, K.S., Buck, M., Zhang, X.
Deposit date:2015-11-26
Release date:2015-12-16
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (8.5 Å)
Cite:TRANSCRIPTION. Structures of the RNA polymerase- Sigma 54 reveal new and conserved regulatory strategies.
Science, 349, 2015
5NSR
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CRYO-EM STRUCTURE OF RNA POLYMERASE-SIGMA54 HOLO ENZYME WITH PROMOTER DNA CLOSED COMPLEX
Descriptor:DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Glyde, R., Ye, F.Z., Darbari, V.C., Zhang, N., Buck, M., Zhang, X.D.
Deposit date:2017-04-26
Release date:2017-06-28
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures of RNA Polymerase Closed and Intermediate Complexes Reveal Mechanisms of DNA Opening and Transcription Initiation.
Mol. Cell, 67, 2017
5NSS
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CRYO-EM STRUCTURE OF RNA POLYMERASE-SIGMA54 HOLOENZYME WITH PROMOTER DNA AND TRANSCRIPTION ACTIVATOR PSPF INTERMEDATE COMPLEX
Descriptor:DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta',DNA-directed RNA polymerase subunit beta',DNA-directed RNA polymerase subunit beta', ...
Authors:Glyde, R., Ye, F.Z., Darbari, V.C., Zhang, N., Buck, M., Zhang, X.D.
Deposit date:2017-04-26
Release date:2017-06-28
Last modified:2018-10-24
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Structures of RNA Polymerase Closed and Intermediate Complexes Reveal Mechanisms of DNA Opening and Transcription Initiation.
Mol. Cell, 67, 2017
5NWT
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI RNA POLYMERASE - SIGMA54 HOLOENZYME COMPLEX
Descriptor:DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhang, X., Buck, M., Darbari, V.C., Yang, Y., Zhang, N., Lu, D., Glyde, R., Wang, Y., Winkelman, J., Gourse, R.L., Murakami, K.S.
Deposit date:2017-05-08
Release date:2017-09-13
Method:X-RAY DIFFRACTION (3.76 Å)
Cite:TRANSCRIPTION. Structures of the RNA polymerase-Sigma54 reveal new and conserved regulatory strategies.
Science, 349, 2015
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