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3MBV
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BU of 3mbv by Molmil
Structure of bacterirhodopsin crystallized in betta-XylOC(16+4) meso phase
Descriptor: (3R,7R,11R)-3,7,11,15-tetramethylhexadecyl alpha-D-ribopyranoside, Bacteriorhodopsin, RETINAL
Authors:Borshchevskiy, V, Moiseeva, E, Kuklin, A, Bueldt, G, Hato, M, Gordeliy, V.
Deposit date:2010-03-26
Release date:2010-11-03
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Isoprenoid-chained lipid beta-XylOC16+4 A novel molecule for in meso membrane protein crystallization
J.Cryst.Growth, 312, 2010
4XA7
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BU of 4xa7 by Molmil
Soluble part of holo NqrC from V. harveyi
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, Na(+)-translocating NADH-quinone reductase subunit C
Authors:Borshchevskiy, V, Round, E, Bertsova, Y, Polovinkin, V, Gushchin, I, Mishin, A, Kovalev, K, Kachalova, G, Popov, A, Bogachev, A, Gordeliy, V.
Deposit date:2014-12-12
Release date:2015-03-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural and Functional Investigation of Flavin Binding Center of the NqrC Subunit of Sodium-Translocating NADH:Quinone Oxidoreductase from Vibrio harveyi.
Plos One, 10, 2015
4MD1
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BU of 4md1 by Molmil
Orange species of bacteriorhodopsin from Halobacterium salinarum
Descriptor: (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
Authors:Borshchevskiy, V, Erofeev, I, Round, E, Weik, M, Ishchenko, A, Gushchin, I, Mishin, A, Bueldt, G, Gordeliy, V.
Deposit date:2013-08-22
Release date:2014-10-08
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Low-dose X-ray radiation induces structural alterations in proteins.
Acta Crystallogr.,Sect.D, 70, 2014
4MD2
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BU of 4md2 by Molmil
Ground state of bacteriorhodopsin from Halobacterium salinarum
Descriptor: (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
Authors:Borshchevskiy, V, Erofeev, I, Round, E, Weik, M, Ishchenko, A, Gushchin, I, Mishin, A, Bueldt, G, Gordeliy, V.
Deposit date:2013-08-22
Release date:2014-10-08
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Low-dose X-ray radiation induces structural alterations in proteins.
Acta Crystallogr.,Sect.D, 70, 2014
7Z09
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BU of 7z09 by Molmil
Crystal structure of the ground state of bacteriorhodopsin at 1.05 Angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Bacteriorhodopsin, EICOSANE, ...
Authors:Borshchevskiy, V, Kovalev, K, Round, E, Efremov, R, Bourenkov, G, Gordeliy, V.
Deposit date:2022-02-22
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins.
Nat.Struct.Mol.Biol., 29, 2022
7Z0A
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BU of 7z0a by Molmil
Crystal structure of the ground state of bacteriorhodopsin at 1.22 Angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Bacteriorhodopsin, EICOSANE, ...
Authors:Borshchevskiy, V, Kovalev, K, Round, E, Efremov, R, Bourenkov, G, Gordeliy, V.
Deposit date:2022-02-22
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins.
Nat.Struct.Mol.Biol., 29, 2022
7Z0D
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BU of 7z0d by Molmil
Crystal structure of the L state of bacteriorhodopsin at 1.20 Angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Bacteriorhodopsin, EICOSANE, ...
Authors:Borshchevskiy, V, Kovalev, K, Round, E, Efremov, R, Bourenkov, G, Gordeliy, V.
Deposit date:2022-02-22
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins.
Nat.Struct.Mol.Biol., 29, 2022
7Z0C
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BU of 7z0c by Molmil
Crystal structure of the K state of bacteriorhodopsin at 1.53 Angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Bacteriorhodopsin, EICOSANE, ...
Authors:Borshchevskiy, V, Kovalev, K, Round, E, Efremov, R, Bourenkov, G, Gordeliy, V.
Deposit date:2022-02-22
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins.
Nat.Struct.Mol.Biol., 29, 2022
7Z0E
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BU of 7z0e by Molmil
Crystal structure of the M state of bacteriorhodopsin at 1.22 Angstrom resolution
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-PHYTANYL-GLYCEROL, ...
Authors:Borshchevskiy, V, Kovalev, K, Round, E, Efremov, R, Bourenkov, G, Gordeliy, V.
Deposit date:2022-02-22
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins.
Nat.Struct.Mol.Biol., 29, 2022
6EID
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BU of 6eid by Molmil
Crystal structure of wild-type Channelrhodopsin 2
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Archaeal-type opsin 2, PHOSPHATE ION, ...
Authors:Borshchevskiy, V, Kovalev, K, Volkov, O, Polovinkin, V, Marin, E, Balandin, T, Astashkin, R, Bamann, C, Bueldt, G, Willlbold, D, Popov, A, Bamberg, E, Gordeliy, V.
Deposit date:2017-09-19
Release date:2017-12-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural insights into ion conduction by channelrhodopsin 2.
Science, 358, 2017
8ZST
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BU of 8zst by Molmil
Lysozyme Crystallized with Bioassembler on Earth
Descriptor: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ...
Authors:MacCarthy, C, Koudan, E.V, Petrov, S.V, Levin, A.A, Khesuani, Y.D, Borshchevskiy, V.
Deposit date:2024-06-05
Release date:2025-05-28
Last modified:2025-06-25
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Exploring the potential of a bioassembler for protein crystallization in space.
Npj Microgravity, 11, 2025
8ZSU
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BU of 8zsu by Molmil
Lysozyme Crystallized with Bioassembler in Space Microgravity
Descriptor: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ...
Authors:MacCarthy, C, Koudan, E.V, Petrov, S.V, Levin, A.A, Khesuani, Y.D, Borshchevskiy, V.
Deposit date:2024-06-05
Release date:2025-05-28
Last modified:2025-06-25
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Exploring the potential of a bioassembler for protein crystallization in space.
Npj Microgravity, 11, 2025
9VF8
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BU of 9vf8 by Molmil
Structure of Meiothermus ruber Mrub_1259 LOV domain (MrLOV)
Descriptor: FLAVIN MONONUCLEOTIDE, histidine kinase
Authors:Semenov, O, Nazarenko, V, Yudenko, A, Remeeva, A, Borshchevskiy, V, Yang, Y, Gushchin, I.
Deposit date:2025-06-10
Release date:2025-06-25
Method:X-RAY DIFFRACTION (3.352 Å)
Cite:Structures of Meiothermus ruber LOV domains
To Be Published
9VF7
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BU of 9vf7 by Molmil
Structure of Meiothermus ruber Mrub_1259 LOV domain with N- and C-terminal alpha helices (MrLOVe)
Descriptor: FLAVIN MONONUCLEOTIDE, histidine kinase
Authors:Semenov, O, Nazarenko, V, Yudenko, A, Remeeva, A, Borshchevskiy, V, Yang, Y, Gushchin, I.
Deposit date:2025-06-10
Release date:2025-06-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Meiothermus ruber LOV domains
To Be Published
6EYU
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BU of 6eyu by Molmil
Crystal structure of the inward H(+) pump xenorhodopsin
Descriptor: Bacteriorhodopsin, EICOSANE, RETINAL, ...
Authors:Kovalev, K, Shevchenko, V, Polovinkin, V, Mager, T, Gushchin, I, Melnikov, I, Borshchevskiy, V, Popov, A, Alekseev, A, Gordeliy, V.
Deposit date:2017-11-13
Release date:2017-12-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Inward H(+) pump xenorhodopsin: Mechanism and alternative optogenetic approach.
Sci Adv, 3, 2017
8YWP
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BU of 8ywp by Molmil
Crystal structure of the Fab fragment of anti-IL-6 antibody I9H
Descriptor: GLYCEROL, Heavy chain of the Fab fragment of anti-IL-6 antibody I9H, Light chain of the Fab fragment of anti-IL-6 antibody I9H, ...
Authors:Yudenko, A, Bukhdruker, S, Eliseev, I, Rodin, S, Burtseva, A, Petrov, A, Zlobina, O, Ischenko, A, Borshchevskiy, V.
Deposit date:2024-03-31
Release date:2024-11-06
Last modified:2025-01-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of signaling complex inhibition by IL-6 domain-swapped dimers.
Structure, 33, 2025
8YWR
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BU of 8ywr by Molmil
Crystal structure of the Fab fragment of the anti-IL-6 antibody 68F2 in complex with a domain-swapped IL-6 dimer
Descriptor: Heavy chain of the Fab fragment of anti-IL-6 antibody 68F2, Interleukin-6, Light chain of the Fab fragment of anti-IL-6 antibody 68F2, ...
Authors:Bukhdruker, S, Yudenko, A, Borshchevskiy, V.
Deposit date:2024-03-31
Release date:2024-11-06
Last modified:2025-01-15
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Structural basis of signaling complex inhibition by IL-6 domain-swapped dimers.
Structure, 33, 2025
8YWQ
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BU of 8ywq by Molmil
Crystal structure of the Fab fragment of the anti-IL-6 antibody I9H in complex with a domain-swapped IL-6 dimer
Descriptor: Heavy chain of the Fab fragment of anti-IL-6 antibody I9H, Interleukin-6, Light chain of the Fab fragment of anti-IL-6 antibody I9H, ...
Authors:Bukhdruker, S, Yudenko, A, Marin, E, Remeeva, A, Rodin, S, Burtseva, A, Petrov, A, Ischenko, A, Borshchevskiy, V.
Deposit date:2024-03-31
Release date:2024-11-06
Last modified:2025-01-15
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural basis of signaling complex inhibition by IL-6 domain-swapped dimers.
Structure, 33, 2025
5JTB
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BU of 5jtb by Molmil
Crystal structure of the chimeric protein of A2aAR-BRIL with bound iodide ions
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, ...
Authors:Melnikov, I, Polovinkin, V, Shevtsov, M, Borshchevskiy, V, Cherezov, V, Popov, A, Gordeliy, V.
Deposit date:2016-05-09
Release date:2017-05-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Fast iodide-SAD phasing for high-throughput membrane protein structure determination.
Sci Adv, 3, 2017
5JJF
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BU of 5jjf by Molmil
Structure of the SRII/HtrII Complex in I212121 space group ("U" shape) - M state
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2016-04-23
Release date:2017-02-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017
5JJE
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BU of 5jje by Molmil
Structure of the SRII/HtrII Complex in I212121 space group ("U" shape)
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2016-04-23
Release date:2017-02-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017
5JJN
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BU of 5jjn by Molmil
Structure of the SRII/HtrII(G83F) Complex in P212121 space group ("V" shape)
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2016-04-24
Release date:2017-02-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017
6EIG
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BU of 6eig by Molmil
Crystal structure of N24Q/C128T mutant of Channelrhodopsin 2
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Archaeal-type opsin 2, EICOSANE, ...
Authors:Kovalev, K, Borshchevskiy, V, Volkov, O, Polovinkin, V, Marin, E, Balandin, T, Astashkin, R, Bamann, C, Bueldt, G, Willlbold, D, Popov, A, Bamberg, E, Gordeliy, V.
Deposit date:2017-09-19
Release date:2017-12-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into ion conduction by channelrhodopsin 2.
Science, 358, 2017
5VN7
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BU of 5vn7 by Molmil
Structure of bacteriorhodopsin from crystals grown at 20 deg Celcius using GlyNCOC15+4 as an LCP host lipid
Descriptor: Bacteriorhodopsin
Authors:Ishchenko, A, Peng, L, Zinovev, E, Vlasov, A, Lee, S.C, Kuklin, A, Mishin, A, Borshchevskiy, V, Zhang, Q, Cherezov, V.
Deposit date:2017-04-28
Release date:2017-07-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Chemically Stable Lipids for Membrane Protein Crystallization.
Cryst Growth Des, 17, 2017
4HYJ
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BU of 4hyj by Molmil
Crystal structure of Exiguobacterium sibiricum rhodopsin
Descriptor: EICOSANE, RETINAL, Rhodopsin
Authors:Gushchin, I, Chervakov, P, Kuzmichev, P, Popov, A, Round, E, Borshchevskiy, V, Dolgikh, D, Kirpichnikov, M, Petrovskaya, L, Chupin, V, Arseniev, A, Gordeliy, V.
Deposit date:2012-11-13
Release date:2013-07-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the proton pumping by unusual proteorhodopsin from nonmarine bacteria.
Proc.Natl.Acad.Sci.USA, 110, 2013

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