Author results

2NOO
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CRYSTAL STRUCTURE OF MUTANT NIKA
Descriptor:Nickel-binding periplasmic protein, IODIDE ION, NICKEL (II) ION
Authors:Addy, C., Ohara, M., Kawai, F., Kidera, A., Ikeguchi, M., Fuchigami, S., Osawa, M., Shimada, I., Park, S.Y., Tame, J.R.H., Heddle, J.G.
Deposit date:2006-10-26
Release date:2007-01-23
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Nickel binding to NikA: an additional binding site reconciles spectroscopy, calorimetry and crystallography.
Acta Crystallogr.,Sect.D, 63, 2007
3WW7
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CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED PIZZA2 PROTEIN
Descriptor:Pizza2 protein, GLYCEROL
Authors:Voet, A.R.D., Noguchi, H., Addy, C., Simoncini, D., Terada, D., Unzai, S., Park, S.Y., Zhang, K.Y.J., Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2014-11-05
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WW8
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CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED PIZZA3 PROTEIN
Descriptor:Pizza3 protein, SULFATE ION, GLYCEROL
Authors:Voet, A.R.D., Noguchi, H., Addy, C., Simoncini, D., Terada, D., Unzai, S., Park, S.Y., Zhang, K.Y.J., Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2014-11-05
Method:X-RAY DIFFRACTION (1.402 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WW9
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CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED PIZZA6 PROTEIN
Descriptor:pizza6 protein, SULFATE ION, GLYCEROL
Authors:Voet, A.R.D., Noguchi, H., Addy, C., Simoncini, D., Terada, D., Unzai, S., Park, S.Y., Zhang, K.Y.J., Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2014-11-05
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WWA
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CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED PIZZA7 PROTEIN AFTER HEAT TREATMENT
Descriptor:Pizza7H protein, ISOPROPYL ALCOHOL
Authors:Voet, A.R.D., Noguchi, H., Addy, C., Simoncini, D., Terada, D., Unzai, S., Park, S.Y., Zhang, K.Y.J., Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2014-11-05
Method:X-RAY DIFFRACTION (1.988 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WWB
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CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED PIZZA2-SR PROTEIN
Descriptor:Pizza2-SR protein
Authors:Voet, A.R.D., Noguchi, H., Addy, C., Simoncini, D., Terada, D., Unzai, S., Park, S.Y., Zhang, K.Y.J., Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2014-11-05
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WWF
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CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED PIZZA2-SR PROTEIN
Descriptor:pizza2sr-pb protein
Authors:Voet, A.R.D., Noguchi, H., Addy, C., Simoncini, D., Terada, D., Unzai, S., Park, S.Y., Zhang, K.Y.J., Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2014-11-05
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
4ZCN
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CRYSTAL STRUCTURE OF NVPIZZA2-S16S58
Descriptor:nvPizza2-S16S58, IODIDE ION, SULFATE ION
Authors:Voet, A.R.D., Noguchi, H., Addy, C., Zhang, K.Y.J., Tame, J.R.H.
Deposit date:2015-04-16
Release date:2015-07-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of nvPizza2-S16S58
To Be Published
5CHB
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CRYSTAL STRUCTURE OF NVPIZZA2-S16H58 COORDINATING A CDCL2 NANOCRYSTAL
Descriptor:nvPizza2-S16H58, CADMIUM ION, CHLORIDE ION, ...
Authors:Voet, A.R.D., Noguchi, H., Addy, C., Zhang, K.Y.J., Tame, J.R.H.
Deposit date:2015-07-10
Release date:2015-07-22
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Biomineralization of a Cadmium Chloride Nanocrystal by a Designed Symmetrical Protein
Angew.Chem.Int.Ed.Engl., 54, 2015
6G6M
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CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED TAKO8 PROTEIN IN P42212
Descriptor:Tako8, SULFATE ION
Authors:Noguchi, H., Addy, C., Simoncini, D., Van Meervelt, L., Schiex, T., Zhang, K.Y.J., Tame, J.R.H., Voet, A.R.D.
Deposit date:2018-04-01
Release date:2018-11-28
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
6G6N
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CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED TAKO8 PROTEIN IN C2
Descriptor:Tako8
Authors:Noguchi, H., Addy, C., Simoncini, D., Van Meervelt, L., Schiex, T., Zhang, K.Y.J., Tame, J.R.H., Voet, A.R.D.
Deposit date:2018-04-01
Release date:2018-11-28
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
6G6O
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CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED IKA8 PROTEIN: CRYSTAL PACKING NO.1 IN P63
Descriptor:Ika8, GLYCEROL
Authors:Noguchi, H., Addy, C., Simoncini, D., Van Meervelt, L., Schiex, T., Zhang, K.Y.J., Tame, J.R.H., Voet, A.R.D.
Deposit date:2018-04-01
Release date:2018-11-28
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
6G6P
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CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED IKA8 PROTEIN: CRYSTAL PACKING NO.2 IN P63
Descriptor:Ika8
Authors:Noguchi, H., Addy, C., Simoncini, D., Van Meervelt, L., Schiex, T., Zhang, K.Y.J., Tame, J.R.H., Voet, A.R.D.
Deposit date:2018-04-01
Release date:2018-11-28
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
6G6Q
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CRYSTAL STRUCTURE OF THE COMPUTATIONALLY DESIGNED IKA4 PROTEIN
Descriptor:Ika4
Authors:Noguchi, H., Addy, C., Simoncini, D., Van Meervelt, L., Schiex, T., Zhang, K.Y.J., Tame, J.R.H., Voet, A.R.D.
Deposit date:2018-04-01
Release date:2018-11-28
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
5F53
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NANO-RING OF CADMIUM IONS COORDINATED BY NVPIZZA2-S16S58
Descriptor:NVPIZZA2-S16S58, CADMIUM ION, CHLORIDE ION
Authors:Voet, A.R.D., Tame, J.R.H.
Deposit date:2015-12-04
Release date:2016-12-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A cadmium chloride ring created by a designed symmetrical protein
To Be Published
1AL3
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COFACTOR BINDING FRAGMENT OF CYSB FROM KLEBSIELLA AEROGENES
Descriptor:CYS REGULON TRANSCRIPTIONAL ACTIVATOR CYSB, SULFATE ION
Authors:Verschueren, K.H.G., Tyrrell, R., Wilkinson, A.J.
Deposit date:1997-06-10
Release date:1997-12-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of the cofactor-binding fragment of the LysR family member, CysB: a familiar fold with a surprising subunit arrangement.
Structure, 5, 1997
4YNX
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STRUCTURE OF YDIE FROM E. COLI
Descriptor:Uncharacterized protein YdiE, SULFATE ION
Authors:Tame, J.R.H., Nishimura, K., Zhang, K.Y.J.
Deposit date:2015-03-11
Release date:2015-05-20
Last modified:2015-07-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal and solution structure of YdiE from Escherichia coli
Acta Crystallogr.,Sect.F, 71, 2015
5I1Z
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STRUCTURE OF NVPIZZA2-H16S58
Descriptor:nvPizza2-H16S58, SULFATE ION
Authors:Tame, J.R.H., Voet, A.R.D.
Deposit date:2016-02-07
Release date:2017-02-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Broken Symmetry: Partial domain swapping in an artificial trimeric protein
To Be Published
5XG5
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CRYSTAL STRUCTURE OF MITSUBA-1 WITH BOUND NACGAL
Descriptor:MITSUBA-1, N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE
Authors:Terada, D., Voet, A.R.D., Kamata, K., Zhang, K.Y.J., Tame, J.R.H.
Deposit date:2017-04-12
Release date:2017-07-12
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Computational design of a symmetrical beta-trefoil lectin with cancer cell binding activity.
Sci Rep, 7, 2017
5Z01
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NATIVE ESCHERICHIA COLI L,D-CARBOXYPEPTIDASE A (LDCA)
Descriptor:Murein tetrapeptide carboxypeptidase, MAGNESIUM ION
Authors:Meyer, K., Tame, J.R.H.
Deposit date:2017-12-18
Release date:2018-04-25
Last modified:2018-05-02
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure and oligomeric form of Escherichia colil,d-carboxypeptidase A.
Biochem. Biophys. Res. Commun., 499, 2018
5Z03
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MUTANT (S106A) ESCHERICHIA COLI L,D-CARBOXYPEPTIDASE A (LDCA)
Descriptor:Murein tetrapeptide carboxypeptidase
Authors:Meyer, K., Tame, J.R.H.
Deposit date:2017-12-18
Release date:2018-04-25
Last modified:2018-05-02
Method:X-RAY DIFFRACTION (1.755 Å)
Cite:The crystal structure and oligomeric form of Escherichia colil,d-carboxypeptidase A.
Biochem. Biophys. Res. Commun., 499, 2018