Author results

3FI6
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APO-H49AFR WITH HIGH CONTENT OF PD IONS
Descriptor:Ferritin light chain, PALLADIUM ION, CADMIUM ION, ...
Authors:Abe, M., Ueno, T., Hirata, K., Suzuki, M., Abe, S., Shimizu, N., Yamaoto, M., Takata, M., Watanabe, Y.
Deposit date:2008-12-11
Release date:2009-04-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Process of Accumulation of Metal Ions on the Interior Surface of apo-Ferritin: Crystal Structures of a Series of apo-Ferritins Containing Variable Quantities of Pd(II) Ions
J.Am.Chem.Soc., 131, 2009
3H7G
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APO-FR WITH AU IONS
Descriptor:Ferritin light chain, GOLD 3+ ION, CADMIUM ION, ...
Authors:Abe, M., Ueno, T., Abe, S., Suzuki, M., Goto, T., Toda, Y., Akita, T., Yamada, Y., Watanabe, Y.
Deposit date:2009-04-27
Release date:2009-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Preparation and catalytic reaction of Au/Pd bimetallic nanoparticles in apo-ferritin
Chem.Commun.(Camb.), 32, 2009
2Z5P
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APO-FR WITH LOW CONTENT OF PD IONS
Descriptor:Ferritin light chain, PALLADIUM ION, CADMIUM ION, ...
Authors:Ueno, T., Hirata, K., Abe, M., Suzuki, M., Abe, S., Shimizu, N., Yamamoto, M., Takata, M., Watanabe, Y.
Deposit date:2007-07-16
Release date:2008-07-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Process of accumulation of metal ions on the interior surface of apo-ferritin: crystal structures of a series of apo-ferritins containing variable quantities of Pd(II) ions.
J.Am.Chem.Soc., 131, 2009
2Z5Q
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APO-FR WITH INTERMEDIATE CONTENT OF PD ION
Descriptor:Ferritin light chain, PALLADIUM ION, CADMIUM ION, ...
Authors:Ueno, T., Hirata, K., Abe, M., Suzuki, M., Abe, S., Shimizu, N., Yamamoto, M., Takata, M., Watanabe, Y.
Deposit date:2007-07-16
Release date:2008-07-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Process of accumulation of metal ions on the interior surface of apo-ferritin: crystal structures of a series of apo-ferritins containing variable quantities of Pd(II) ions.
J.Am.Chem.Soc., 131, 2009
2Z5R
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APO-FR WITH HIGH CONTENT OF PD IONS
Descriptor:Ferritin light chain, PALLADIUM ION, CADMIUM ION
Authors:Ueno, T., Hirata, K., Abe, M., Suzuki, M., Abe, S., Shimizu, N., Yamamoto, M., Takata, M., Watanabe, Y.
Deposit date:2007-07-16
Release date:2008-07-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Process of accumulation of metal ions on the interior surface of apo-ferritin: crystal structures of a series of apo-ferritins containing variable quantities of Pd(II) ions.
J.Am.Chem.Soc., 131, 2009
2ZG7
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CRYSTAL STRUCTURE OF PD(ALLYL)/APO-FR
Descriptor:Ferritin light chain, CADMIUM ION, SULFATE ION, ...
Authors:Abe, S., Niemeyer, J., Abe, M., Ueno, T., Hikage, T., Erker, G., Watanabe, Y.
Deposit date:2008-01-18
Release date:2008-08-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Control of the coordination structure of organometallic palladium complexes in an apo-ferritin cage.
J.Am.Chem.Soc., 130, 2008
2ZG8
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CRYSTAL STRUCTURE OF PD(ALLYL)/APO-H49AFR
Descriptor:Ferritin light chain, PALLADIUM ION, CADMIUM ION, ...
Authors:Abe, S., Niemeyer, J., Abe, M., Ueno, T., Hikage, T., Erker, G., Watanabe, Y.
Deposit date:2008-01-18
Release date:2008-08-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Control of the coordination structure of organometallic palladium complexes in an apo-ferritin cage.
J.Am.Chem.Soc., 130, 2008
2ZG9
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CRYSTAL STRUCTURE OF PD(ALLYL)/APO-H114AFR
Descriptor:Ferritin light chain, CADMIUM ION, SULFATE ION, ...
Authors:Abe, S., Niemeyer, J., Abe, M., Ueno, T., Hikage, T., Erker, G., Watanabe, Y.
Deposit date:2008-01-18
Release date:2008-08-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Control of the coordination structure of organometallic palladium complexes in an apo-ferritin cage.
J.Am.Chem.Soc., 130, 2008
4D7Y
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CRYSTAL STRUCTURE OF MOUSE C1QL1 GLOBULAR DOMAIN
Descriptor:C1Q-RELATED FACTOR, CADMIUM ION, NICKEL (II) ION, ...
Authors:Kakegawa, W., Mitakidis, N., Miura, E., Abe, M., Matsuda, K., Takeo, Y., Kohda, K., Motohashi, J., Takahashi, A., Nagao, S., Muramatsu, S., Watanabe, M., Sakimura, K., Aricescu, A.R., Yuzaki, M.
Deposit date:2014-12-01
Release date:2015-01-28
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Anterograde C1Ql1 Signaling is Required in Order to Determine and Maintain a Single-Winner Climbing Fiber in the Mouse Cerebellum
Neuron, 85, 2015
5H0Q
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CRYSTAL STRUCTURE OF LIPID BINDING PROTEIN NAKANORI AT 1.5A
Descriptor:Lipid binding protein
Authors:Makino, A., Abe, M., Ishitsuka, R., Murate, M., Kishimoto, T., Sakai, S., Hullin-Matsuda, F., Shimada, Y., Inaba, T., Miyatake, H., Tanaka, H., Kurahashi, A., Pack, C.G., Kasai, R.S., Kubo, S., Schieber, N.L., Dohmae, N., Tochio, N., Hagiwara, K., Sasaki, Y., Aida, Y., Fujimori, F., Kigawa, T., Nishikori, K., Parton, R.G., Kusumi, A., Sako, Y., Anderluh, G., Yamashita, M., Kobayashi, T., Greimel, P., Kobayashi, T.
Deposit date:2016-10-06
Release date:2016-10-19
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:A novel sphingomyelin/cholesterol domain-specific probe reveals the dynamics of the membrane domains during virus release and in Niemann-Pick type C
FASEB J., 31, 2017
2E2G
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CRYSTAL STRUCTURE OF ARCHAEAL PEROXIREDOXIN, THIOREDOXIN PEROXIDASE FROM AEROPYRUM PERNIX K1 (PRE-OXIDATION FORM)
Descriptor:Probable peroxiredoxin
Authors:Nakamura, T., Yamamoto, T., Abe, M., Matsumura, H., Hagihara, Y., Goto, T., Yamaguchi, T., Inoue, T.
Deposit date:2006-11-13
Release date:2007-11-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
2E2M
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CRYSTAL STRUCTURE OF ARCHAEAL PEROXIREDOXIN, THIOREDOXIN PEROXIDASE FROM AEROPYRUM PERNIX K1 (SULFINIC ACID FORM)
Descriptor:Probable peroxiredoxin
Authors:Nakamura, T., Yamamoto, T., Abe, M., Matsumura, H., Hagihara, Y., Goto, T., Yamaguchi, T., Inoue, T.
Deposit date:2006-11-14
Release date:2007-11-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
2NVL
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CRYSTAL STRUCTURE OF ARCHAEAL PEROXIREDOXIN, THIOREDOXIN PEROXIDASE FROM AEROPYRUM PERNIX K1 (SULFONIC ACID FORM)
Descriptor:Probable peroxiredoxin
Authors:Nakamura, T., Yamamoto, T., Abe, M., Matsumura, H., Hagihara, Y., Goto, T., Yamaguchi, T., Inoue, T.
Deposit date:2006-11-13
Release date:2007-11-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
2ZCT
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OXIDATION OF ARCHAEAL PEROXIREDOXIN INVOLVES A HYPERVALENT SULFUR INTERMEDIATE
Descriptor:Probable peroxiredoxin
Authors:Nakamura, T., Hagihara, Y., Abe, M., Inoue, T., Yamamoto, T., Matsumura, H.
Deposit date:2007-11-12
Release date:2008-05-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
4XLZ
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N,N'-DIACETYLCHITOBIOSE DEACETYLASE (SEMET DERIVATIVE) FROM PYROCOCCUS FURIOSUS IN THE PRESENCE OF CADMIUM
Descriptor:Uncharacterized protein, CADMIUM ION, HEXANE-1,6-DIOL, ...
Authors:Nakamura, T., Niiyama, M., Hashimoto, W., Ida, K., Uegaki, K.
Deposit date:2015-01-14
Release date:2015-06-10
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus
Acta Crystallogr.,Sect.F, 71, 2015
4XM0
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N,N'-DIACETYLCHITOBIOSE DEACETYLASE (SEMET DERIVATIVE) FROM PYROCOCCUS FURIOSUS IN THE ABSENCE OF CADMIUM
Descriptor:Uncharacterized protein, ZINC ION
Authors:Nakamura, T., Niiyama, M., Hashimoto, W., Ida, K., Uegaki, K.
Deposit date:2015-01-14
Release date:2015-06-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus
Acta Crystallogr.,Sect.F, 71, 2015
4XM1
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N,N'-DIACETYLCHITOBIOSE DEACETYLASE FROM PYROCOCCUS FURIOSUS IN THE PRESENCE OF CADMIUM
Descriptor:Uncharacterized protein, CADMIUM ION, HEXANE-1,6-DIOL, ...
Authors:Nakamura, T., Niiyama, M., Hashimoto, W., Ida, K., Uegaki, K.
Deposit date:2015-01-14
Release date:2015-06-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus
Acta Crystallogr.,Sect.F, 71, 2015
4XM2
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N,N'-DIACETYLCHITOBIOSE DEACETYLASE FROM PYROCOCCUS FURIOSUS IN THE ABSENCE OF CADMIUM
Descriptor:Uncharacterized protein, ZINC ION
Authors:Nakamura, T., Niiyama, M., Hashimoto, W., Ida, K., Uegaki, K.
Deposit date:2015-01-14
Release date:2015-06-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus
Acta Crystallogr.,Sect.F, 71, 2015
5ZQO
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TANKYRASE-2 IN COMPLEX WITH COMPOUND 1A
Descriptor:Tankyrase-2, ZINC ION, 2-[4-(2-methoxyphenyl)piperazin-1-yl]-5,6,7,8-tetrahydroquinazolin-4(3H)-one, ...
Authors:Niwa, H., Shirai, F., Sato, S., Yoshimoto, N., Tsumura, T., Okue, M., Shirouzu, M., Seimiya, H., Umehara, T.
Deposit date:2018-04-19
Release date:2019-04-03
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Discovery of Novel Spiroindoline Derivatives as Selective Tankyrase Inhibitors.
J. Med. Chem., 62, 2019
5ZQP
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TANKYRASE-2 IN COMPLEX WITH COMPOUND 12
Descriptor:Tankyrase-2, ZINC ION, 1'-(4-oxo-3,4,5,6,7,8-hexahydroquinazolin-2-yl)-2H-spiro[1-benzofuran-3,4'-piperidin]-2-one, ...
Authors:Niwa, H., Shirai, F., Sato, S., Yoshimoto, N., Tsumura, T., Okue, M., Shirouzu, M., Seimiya, H., Umehara, T.
Deposit date:2018-04-19
Release date:2019-04-03
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Discovery of Novel Spiroindoline Derivatives as Selective Tankyrase Inhibitors.
J. Med. Chem., 62, 2019
5ZQQ
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TANKYRASE-2 IN COMPLEX WITH COMPOUND 52
Descriptor:Tankyrase-2, ZINC ION, 1-methyl-1'-(4-oxo-3,4,5,6,7,8-hexahydroquinazolin-2-yl)spiro[indole-3,4'-piperidin]-2(1H)-one, ...
Authors:Niwa, H., Shirai, F., Sato, S., Yoshimoto, N., Tsumura, T., Okue, M., Shirouzu, M., Seimiya, H., Umehara, T.
Deposit date:2018-04-19
Release date:2019-04-03
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Discovery of Novel Spiroindoline Derivatives as Selective Tankyrase Inhibitors.
J. Med. Chem., 62, 2019
5ZQR
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TANKYRASE-2 IN COMPLEX WITH COMPOUND 40C
Descriptor:Tankyrase-2, ZINC ION, 2-[4,6-difluoro-1-(2-hydroxyethyl)-1,2-dihydro-1'H-spiro[indole-3,4'-piperidin]-1'-yl]-5,6,7,8-tetrahydroquinazolin-4(3H)-one, ...
Authors:Niwa, H., Shirai, F., Sato, S., Yoshimoto, N., Tsumura, T., Okue, M., Shirouzu, M., Seimiya, H., Umehara, T.
Deposit date:2018-04-19
Release date:2019-04-03
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Discovery of Novel Spiroindoline Derivatives as Selective Tankyrase Inhibitors.
J. Med. Chem., 62, 2019
6A84
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TANKYRASE-2 IN COMPLEX WITH COMPOUND 15D
Descriptor:Tankyrase-2, ZINC ION, 2-(4-chloro-1,2-dihydro-1'H-spiro[indole-3,4'-piperidin]-1'-yl)-5,6,7,8-tetrahydroquinazolin-4(3H)-one, ...
Authors:Niwa, H., Shirai, F., Sato, S., Yoshimoto, N., Tsumura, T., Okue, M., Shirouzu, M., Seimiya, H., Umehara, T.
Deposit date:2018-07-06
Release date:2019-04-03
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Discovery of Novel Spiroindoline Derivatives as Selective Tankyrase Inhibitors.
J. Med. Chem., 62, 2019
3UMW
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CRYSTAL STRUCTURE OF PIM1 KINASE IN COMPLEX WITH INHIBITOR (Z)-2-[(1H-INDAZOL-3-YL)METHYLENE]-6-METHOXY-7-(PIPERAZIN-1-YLMETHYL)BENZOFURAN-3(2H)-ONE
Descriptor:Proto-oncogene serine/threonine-protein kinase pim-1, GLYCEROL, SULFATE ION, ...
Authors:Parker, L.J., Handa, N., Yokoyama, S.
Deposit date:2011-11-14
Release date:2012-10-03
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Rational evolution of a novel type of potent and selective proviral integration site in Moloney murine leukemia virus kinase 1 (PIM1) inhibitor from a screening-hit compound.
J.Med.Chem., 55, 2012