Author results

1SFV
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PORCINE PANCREAS PHOSPHOLIPASE A2, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:PHOSPHOLIPASE A2, CALCIUM ION
Authors:Van Den Berg, B., Tessari, M., Boelens, R., Dijkman, R., Kaptein, R., De Haas, G.H., Verheij, H.M.
Deposit date:1996-02-20
Release date:1996-07-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of porcine pancreatic phospholipase A2 complexed with micelles and a competitive inhibitor.
J.Biomol.NMR, 5, 1995
1SFW
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PORCINE PANCREAS PHOSPHOLIPASE A2, NMR, 18 STRUCTURES
Descriptor:PHOSPHOLIPASE A2, CALCIUM ION
Authors:Van Den Berg, B., Tessari, M., Boelens, R., Dijkman, R., Kaptein, R., De Haas, G.H., Verheij, H.M.
Deposit date:1996-02-23
Release date:1996-07-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of porcine pancreatic phospholipase A2 complexed with micelles and a competitive inhibitor.
J.Biomol.NMR, 5, 1995
6EJH
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CRYSTAL STRUCTURE OF THE G343C MUTANT OF CANDIDA ALBICANS MEP2
Descriptor:Ammonium transporter
Authors:van den Berg, B., van den Berg, B.
Deposit date:2017-09-21
Release date:2018-10-10
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal structure of the G343C mutant of Candida albicans Mep2
To Be Published
1RH5
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THE STRUCTURE OF A PROTEIN CONDUCTING CHANNEL
Descriptor:Preprotein translocase secY subunit, Preprotein translocase secE subunit, SecBeta
Authors:van den Berg, B., Clemons Jr., W.M., Collinson, I., Modis, Y., Hartmann, E., Harrison, S.C., Rapoport, T.A.
Deposit date:2003-11-13
Release date:2004-01-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:X-ray structure of a protein-conducting channel
Nature, 427, 2004
1RHZ
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THE STRUCTURE OF A PROTEIN CONDUCTING CHANNEL
Descriptor:Preprotein translocase secY subunit, Preprotein translocase secE subunit, SecBeta
Authors:van den Berg, B., Clemons Jr., W.M., Collinson, I., Modis, Y., Hartmann, E., Harrison, S.C., Rapoport, T.A.
Deposit date:2003-11-15
Release date:2004-01-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:X-ray structure of a protein-conducting channel.
Nature, 427, 2004
1T16
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CRYSTAL STRUCTURE OF THE BACTERIAL FATTY ACID TRANSPORTER FADL FROM ESCHERICHIA COLI
Descriptor:Long-chain fatty acid transport protein, COPPER (II) ION, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:van den Berg, B., Black, P.N., Clemons Jr., W.M., Rapoport, T.A.
Deposit date:2004-04-15
Release date:2004-06-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the long-chain fatty acid transporter FadL.
Science, 304, 2004
1T1L
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CRYSTAL STRUCTURE OF THE LONG-CHAIN FATTY ACID TRANSPORTER FADL
Descriptor:Long-chain fatty acid transport protein, LAURYL DIMETHYLAMINE-N-OXIDE
Authors:van den Berg, B., Black, P.N., Clemons Jr., W.M., Rapoport, T.A.
Deposit date:2004-04-16
Release date:2004-06-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the long-chain fatty acid transporter FadL.
Science, 304, 2004
3KVN
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CRYSTAL STRUCTURE OF THE FULL-LENGTH AUTOTRANSPORTER ESTA FROM PSEUDOMONAS AERUGINOSA
Descriptor:Esterase estA, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Authors:van den Berg, B.
Deposit date:2009-11-30
Release date:2010-01-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Crystal structure of a full-length autotransporter.
J.Mol.Biol., 396, 2010
4D51
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CRYSTAL STRUCTURE OF CYMA FROM KLEBSIELLA OXYTOCA
Descriptor:CYMA, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Authors:van den Berg, B., Bhamidimarri, S.P., Kleinekathoefer, U., Winterhalter, M.
Deposit date:2014-11-01
Release date:2015-06-03
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
4D5B
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CRYSTAL STRUCTURE OF CYMA FROM KLEBSIELLA OXYTOCA
Descriptor:CYMA, ALPHA-CYCLODEXTRIN (CYCLOHEXA-AMYLOSE), (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Authors:van den Berg, B., Bhamidimarri, S.P., Kleinekathoefer, U., Winterhalter, M.
Deposit date:2014-11-03
Release date:2015-06-03
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
4D5D
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CRYSTAL STRUCTURE OF CYMA FROM KLEBSIELLA OXYTOCA
Descriptor:CYMA, ALPHA-CYCLODEXTRIN (CYCLOHEXA-AMYLOSE), BETA-CYCLODEXTRIN, ...
Authors:van den Berg, B., Bhamidimarri, S.P., Kleinekathoefer, U., Winterhalter, M.
Deposit date:2014-11-03
Release date:2015-06-03
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
4GEY
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HIGH PH STRUCTURE OF PSEUDOMONAS PUTIDA OPRB
Descriptor:Porin B, BETA-D-GLUCOSE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ...
Authors:van den Berg, B.
Deposit date:2012-08-02
Release date:2012-10-24
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for outer membrane sugar uptake in pseudomonads.
J.Biol.Chem., 287, 2012
4GF4
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LOW PH STRUCTURE OF PSEUDOMONAS PUTIDA OPRB
Descriptor:Porin B, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Authors:van den Berg, B.
Deposit date:2012-08-02
Release date:2012-10-24
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for outer membrane sugar uptake in pseudomonads.
J.Biol.Chem., 287, 2012
4V3G
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CRYSTAL STRUCTURE OF CYMA FROM KLEBSIELLA OXYTOCA
Descriptor:CYMA PROTEIN, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Authors:van den Berg, B., Bhamidimarri, S.P., Kleinekathoefer, U., Winterhalter, M.
Deposit date:2014-10-18
Release date:2015-06-03
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (2.513 Å)
Cite:Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
4V3H
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CRYSTAL STRUCTURE OF CYMA FROM KLEBSIELLA OXYTOCA
Descriptor:CYMA PROTEIN, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, NITRATE ION
Authors:van den Berg, B., Bhamidimarri, S.P., Kleinekathoefer, U., Winterhalter, M.
Deposit date:2014-10-18
Release date:2015-06-03
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Outer-membrane translocation of bulky small molecules by passive diffusion.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
5AH3
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CRYSTAL STRUCTURE OF THE MEP2 MUTANT R452D,S453D FROM CANDIDA ALBICANS
Descriptor:MEP2, DECYL-BETA-D-MALTOPYRANOSIDE
Authors:van den Berg, B., Chembath, A., Rutherford, J.
Deposit date:2015-02-04
Release date:2016-03-02
Last modified:2016-05-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Mep2 Ammonium Transceptor Activation by Phosphorylation.
Nat.Commun., 7, 2016
5AID
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CRYSTAL STRUCTURE OF THE MEP2 MUTANT DELTA442 FROM CANDIDA ALBICANS
Descriptor:MEP2
Authors:van den Berg, B., Chembath, A., Rutherford, J.
Deposit date:2015-02-12
Release date:2016-03-02
Last modified:2016-05-11
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Basis for Mep2 Ammonium Transceptor Activation by Phosphorylation.
Nat.Commun., 7, 2016
5FUF
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CRYSTAL STRUCTURE OF THE MEP2 MUTANT S453D FROM CANDIDA ALBICANS
Descriptor:AMMONIUM TRANSPORTER, DECYL-BETA-D-MALTOPYRANOSIDE
Authors:van den Berg, B., Chembath, A., Jefferies, D., Basle, A., Khalid, S., Rutherford, J.
Deposit date:2016-01-26
Release date:2016-05-04
Method:X-RAY DIFFRACTION (2.066 Å)
Cite:Structural Basis for Mep2 Ammonium Transceptor Activation by Phosphorylation.
Nat.Commun., 7, 2016
5O77
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KLEBSIELLA PNEUMONIAE OMPK35
Descriptor:OmpK35, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Authors:van den berg, B., Pathania, M., Zahn, M.
Deposit date:2017-06-08
Release date:2018-06-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A physical model can predict permeability of compounds through porins of Gram-negative bacteria
To Be Published
5O79
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KLEBSIELLA PNEUMONIAE OMPK36
Descriptor:OmpK36, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, MAGNESIUM ION
Authors:van den berg, B., Pathania, M.
Deposit date:2017-06-08
Release date:2018-06-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A physical model can predict permeability of compounds through porins of Gram-negative bacteria
To Be Published
6EJ6
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CRYSTAL STRUCTURE OF THE N240A MUTANT OF CANDIDA ALBICANS MEP2
Descriptor:Ammonium transporter
Authors:van den Berg, B.
Deposit date:2017-09-20
Release date:2018-10-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the N240A mutant of Candida albicans Mep2
To Be Published
6ENE
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OMPF ORTHOLOGUE FROM ENTEROBACTER CLOACAE (OMPE35)
Descriptor:Phosphoporin PhoE, SULFATE ION, B-OCTYLGLUCOSIDE, ...
Authors:van den Berg, B., Abellon-Ruiz, J., Basle, A.
Deposit date:2017-10-04
Release date:2018-10-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:OmpF orthologue from Enterobacter cloacae (OmpE35)
To Be Published
4FMS
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CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA OCCK2 (OPDF) IN COMPLEX WITH GLUCURONATE
Descriptor:Probable porin, BETA-D-GLUCOPYRANURONIC ACID, SULFATE ION, ...
Authors:van den Berg, B., Eren, E.
Deposit date:2012-06-18
Release date:2013-03-13
Last modified:2013-05-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Toward Understanding the Outer Membrane Uptake of Small Molecules by Pseudomonas aeruginosa.
J.Biol.Chem., 288, 2013
2F1T
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OUTER MEMBRANE PROTEIN OMPW
Descriptor:Outer membrane protein W, LAURYL DIMETHYLAMINE-N-OXIDE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ...
Authors:van den Berg, B.
Deposit date:2005-11-15
Release date:2006-01-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The outer membrane protein OmpW forms an eight-stranded beta-barrel with a hydrophobic channel.
J.Biol.Chem., 281, 2006
2F1V
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OUTER MEMBRANE PROTEIN OMPW
Descriptor:Outer membrane protein W, GLYCEROL
Authors:van den Berg, B.
Deposit date:2005-11-15
Release date:2006-01-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The outer membrane protein OmpW forms an eight-stranded beta-barrel with a hydrophobic channel.
J.Biol.Chem., 281, 2006